BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0125.p (181 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772350.1| hypothetical protein bll5710 [Bradyrhizobium ja... 258 3e-67 ref|YP_001990799.1| Appr-1-p processing domain-containing protei... 251 3e-65 ref|YP_001241272.1| hypothetical protein BBta_5392 [Bradyrhizobi... 249 1e-64 ref|YP_004110208.1| Appr-1-p processing domain-containing protei... 247 5e-64 ref|NP_946953.1| Appr-1''-p processing enzyme family protein [Rh... 244 4e-63 >ref|NP_772350.1| hypothetical protein bll5710 [Bradyrhizobium japonicum USDA 110] dbj|BAC50975.1| bll5710 [Bradyrhizobium japonicum USDA 110] Length = 183 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/178 (68%), Positives = 145/178 (81%) Query: 4 RQIGKARLEVIVNDITTLRVDAIVNAANSSLLGGGGVDGAIHRAAGPELLAECRALHGCK 63 R+IG A EVI+ DITTL VDAIVNAAN+SLLGGGGVDGAIHRAAGP+L+AECR LHGCK Sbjct: 6 RRIGGAEFEVIIADITTLSVDAIVNAANTSLLGGGGVDGAIHRAAGPDLVAECRMLHGCK 65 Query: 64 TGDAKITKGYRLPAKHVIHAVGPIWHGGTQNEDALLASCYRRGIELCHANQLGSIAFPAI 123 TG+AKIT GYRL A HVIH VGP+W+GGT +ED LLASCYRR +ELC ++L S+AFPAI Sbjct: 66 TGNAKITMGYRLKAAHVIHTVGPVWNGGTLDEDGLLASCYRRSMELCGKHKLTSVAFPAI 125 Query: 124 STGVYHFPPDRAAGIAVKAVVDALAAAPGLTQVIFCCFSPQSGQLHQEVLEAFGSPCA 181 STG++ FP DRAA IAV+ ++AL AAP + +V+FCCF+ S +LH E L SPCA Sbjct: 126 STGIFRFPADRAAEIAVRTTIEALPAAPSVARVVFCCFAEPSARLHAEALARHSSPCA 183 >ref|YP_001990799.1| Appr-1-p processing domain-containing protein [Rhodopseudomonas palustris TIE-1] gb|ACF00324.1| Appr-1-p processing domain protein [Rhodopseudomonas palustris TIE-1] Length = 180 Score = 251 bits (642), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 123/173 (71%), Positives = 142/173 (82%) Query: 1 LTARQIGKARLEVIVNDITTLRVDAIVNAANSSLLGGGGVDGAIHRAAGPELLAECRALH 60 L +RQIG A EV+V DITTL VDAIVNAANSSLLGGGGVDGAIHRAAGPELLAEC L Sbjct: 3 LFSRQIGTATCEVVVADITTLAVDAIVNAANSSLLGGGGVDGAIHRAAGPELLAECETLG 62 Query: 61 GCKTGDAKITKGYRLPAKHVIHAVGPIWHGGTQNEDALLASCYRRGIELCHANQLGSIAF 120 GC+TGDAKIT+GYRLPA+HVIHAVGPIWHGG EDA LASCY R ++L + ++L SIAF Sbjct: 63 GCETGDAKITRGYRLPARHVIHAVGPIWHGGGHGEDAALASCYARALQLANEHELSSIAF 122 Query: 121 PAISTGVYHFPPDRAAGIAVKAVVDALAAAPGLTQVIFCCFSPQSGQLHQEVL 173 AISTGVY FPP+RAA IAV+ +DAL +A +T+ +FCCFSP S +LH+ L Sbjct: 123 SAISTGVYGFPPERAAPIAVRTTLDALRSATSVTRAVFCCFSPASAELHRVAL 175 >ref|YP_001241272.1| hypothetical protein BBta_5392 [Bradyrhizobium sp. BTAi1] gb|ABQ37366.1| hypothetical protein BBta_5392 [Bradyrhizobium sp. BTAi1] Length = 186 Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 117/170 (68%), Positives = 134/170 (78%) Query: 4 RQIGKARLEVIVNDITTLRVDAIVNAANSSLLGGGGVDGAIHRAAGPELLAECRALHGCK 63 R+IG R EVI DIT L VDAIVNAANSSLLGGGGVDGAIHRAAGPEL+ ECR LHGC+ Sbjct: 6 RKIGATRFEVITADITKLGVDAIVNAANSSLLGGGGVDGAIHRAAGPELVMECRMLHGCR 65 Query: 64 TGDAKITKGYRLPAKHVIHAVGPIWHGGTQNEDALLASCYRRGIELCHANQLGSIAFPAI 123 TG+AKIT+GYRLPA+HVIH VGP+W GG + E LLASCYRR IELCH + L S+AFPAI Sbjct: 66 TGEAKITRGYRLPARHVIHTVGPVWQGGERGEPELLASCYRRSIELCHKHLLDSVAFPAI 125 Query: 124 STGVYHFPPDRAAGIAVKAVVDALAAAPGLTQVIFCCFSPQSGQLHQEVL 173 STG++ FP D AA IAV VDA L+Q++FCCFS QS +LH + L Sbjct: 126 STGIFRFPADLAASIAVSTAVDATREETSLSQIVFCCFSEQSAELHDQAL 175 >ref|YP_004110208.1| Appr-1-p processing domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU45475.1| Appr-1-p processing domain protein [Rhodopseudomonas palustris DX-1] Length = 180 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 121/170 (71%), Positives = 138/170 (81%) Query: 4 RQIGKARLEVIVNDITTLRVDAIVNAANSSLLGGGGVDGAIHRAAGPELLAECRALHGCK 63 RQIG A EV+V DITTL VDAIVNAAN+SLLGGGGVDGAIHRAAGPELLAEC L GC Sbjct: 6 RQIGAATCEVVVADITTLAVDAIVNAANASLLGGGGVDGAIHRAAGPELLAECETLGGCD 65 Query: 64 TGDAKITKGYRLPAKHVIHAVGPIWHGGTQNEDALLASCYRRGIELCHANQLGSIAFPAI 123 TGDA+IT+GYRLPA+HVIHAVGPIWHGG EDA LASCY R ++L + + L SIAF AI Sbjct: 66 TGDARITRGYRLPARHVIHAVGPIWHGGRHGEDAALASCYARALQLANDHALSSIAFSAI 125 Query: 124 STGVYHFPPDRAAGIAVKAVVDALAAAPGLTQVIFCCFSPQSGQLHQEVL 173 STGVY FPP+RAA IAV+ +DAL AA +T+ +FCCFSP S +LH+ L Sbjct: 126 STGVYGFPPERAAPIAVRTTLDALRAATSVTRAVFCCFSPASAELHRAAL 175 >ref|NP_946953.1| Appr-1''-p processing enzyme family protein [Rhodopseudomonas palustris CGA009] emb|CAE27048.1| Appr-1''-p processing enzyme family protein homolog [Rhodopseudomonas palustris CGA009] Length = 180 Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 120/171 (70%), Positives = 138/171 (80%) Query: 3 ARQIGKARLEVIVNDITTLRVDAIVNAANSSLLGGGGVDGAIHRAAGPELLAECRALHGC 62 +RQIG A EV+V DITTL VDAIVNAANSSLLGGGGVDGAIHRAAGPELLAEC L C Sbjct: 5 SRQIGTATCEVVVADITTLAVDAIVNAANSSLLGGGGVDGAIHRAAGPELLAECETLGCC 64 Query: 63 KTGDAKITKGYRLPAKHVIHAVGPIWHGGTQNEDALLASCYRRGIELCHANQLGSIAFPA 122 +TGDAKIT+GYRLPA+HVIHAVGPIWH G EDA LASCY R ++L + + L SIAF A Sbjct: 65 ETGDAKITRGYRLPARHVIHAVGPIWHSGGHGEDAALASCYARALQLANEHALTSIAFSA 124 Query: 123 ISTGVYHFPPDRAAGIAVKAVVDALAAAPGLTQVIFCCFSPQSGQLHQEVL 173 ISTGVY FPP+RAA IAV+ +DAL +A +T+ +FCCFSP S +LH+ L Sbjct: 125 ISTGVYGFPPERAAPIAVRTTLDALRSATSVTRAVFCCFSPASAELHRAAL 175