BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0123.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772352.1| hypothetical protein blr5712 [Bradyrhizobium ja... 692 0.0 ref|ZP_08630574.1| hypothetical protein CSIRO_3684 [Bradyrhizobi... 690 0.0 ref|YP_004110210.1| hypothetical protein Rpdx1_3918 [Rhodopseudo... 660 0.0 ref|YP_576919.1| hypothetical protein Nham_1640 [Nitrobacter ham... 660 0.0 ref|ZP_07024916.1| protein of unknown function DUF323 [Afipia sp... 657 0.0 >ref|NP_772352.1| hypothetical protein blr5712 [Bradyrhizobium japonicum USDA 110] dbj|BAC50977.1| blr5712 [Bradyrhizobium japonicum USDA 110] Length = 415 Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/386 (83%), Positives = 352/386 (91%) Query: 2 DAYRAVRDETERRAAPLSPEDQLIQSMPDASPAKWHRAHTTWFFEQFLLGEHVKGYTPFH 61 DA+ AVR+ETERRAAPLSPEDQ IQSMPDASPAKWHRAHTTWF+EQFLLGEH +GY PFH Sbjct: 29 DAFLAVRNETERRAAPLSPEDQQIQSMPDASPAKWHRAHTTWFWEQFLLGEHCQGYQPFH 88 Query: 62 PDYAYLFNSYYVSAGPRHARHQRGHLTRPTADEVTAYRRHVDAEVVKFFHTAGADKLEAL 121 PD+A+LFNSYYVSAGPRHAR+ RG +TRP A EV AYRR+VDA VVKFF AG DKL A+ Sbjct: 89 PDFAFLFNSYYVSAGPRHARNHRGDITRPGASEVGAYRRYVDAAVVKFFREAGEDKLRAI 148 Query: 122 VPLVEVGLNHEQQHQELMYSDILHAFAQNPIPPAYDPAWRFPASHRGPGEWVTLNEGIHT 181 PLVEVGLNHEQQHQELM++DILHAFAQNP+ PAYDP WRFP++ R +W+ LNEGIHT Sbjct: 149 APLVEVGLNHEQQHQELMFTDILHAFAQNPVYPAYDPDWRFPSATRTGDDWLILNEGIHT 208 Query: 182 VGHADDSFHFDNEKPAHRALVGPVKLAKNLVTNADWLAFMKDGGYSTATLWLMDGFGTVS 241 VGH DDSFHFDNEKPAHRALVGPVK+A+NLVTN +WLAFM+DGGY+ ATLWLMDGF VS Sbjct: 209 VGHVDDSFHFDNEKPAHRALVGPVKIARNLVTNGEWLAFMRDGGYANATLWLMDGFAVVS 268 Query: 242 NEGWQAPGHWREIDGEWKIMTLGGLQPIDPSAPVCHVSYYEADAFARWAGKHLPTEMEWE 301 E WQAPGHWRE+DG W++MTL GL+P+DP APVCHVSYYEADAFARWAGKHLPTEMEWE Sbjct: 269 KEDWQAPGHWREVDGAWQVMTLAGLKPVDPDAPVCHVSYYEADAFARWAGKHLPTEMEWE 328 Query: 302 VAARAGLLNDAYGIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATPAG 361 VAARAG LNDA+GIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATP G Sbjct: 329 VAARAGQLNDAFGIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATPEG 388 Query: 362 HSRVTYRNFFYPHHRWQFTGLRLADY 387 HSR+TYRNFFYPHHRWQFTGLRLADY Sbjct: 389 HSRITYRNFFYPHHRWQFTGLRLADY 414 >ref|ZP_08630574.1| hypothetical protein CSIRO_3684 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06953.1| hypothetical protein CSIRO_3684 [Bradyrhizobiaceae bacterium SG-6C] Length = 419 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/388 (84%), Positives = 351/388 (90%) Query: 1 VDAYRAVRDETERRAAPLSPEDQLIQSMPDASPAKWHRAHTTWFFEQFLLGEHVKGYTPF 60 + A++AVRDETERRAAPLSPEDQLIQSMPDASPAKWHRAH TWF+EQFLLGE+V+GY P+ Sbjct: 31 LKAFQAVRDETERRAAPLSPEDQLIQSMPDASPAKWHRAHVTWFWEQFLLGENVRGYKPY 90 Query: 61 HPDYAYLFNSYYVSAGPRHARHQRGHLTRPTADEVTAYRRHVDAEVVKFFHTAGADKLEA 120 HPDYAYLFNSYYVSAGPRHAR QRGHLTRP ADEVTAYR+HVD V FF +A A LE Sbjct: 91 HPDYAYLFNSYYVSAGPRHARAQRGHLTRPGADEVTAYRKHVDTAVAAFFASADAMTLEK 150 Query: 121 LVPLVEVGLNHEQQHQELMYSDILHAFAQNPIPPAYDPAWRFPASHRGPGEWVTLNEGIH 180 + PL+EVGLNHEQQHQELM +DILHAFAQNPIPPAY P WRFPAS R WVTL EGIH Sbjct: 151 VEPLIEVGLNHEQQHQELMLTDILHAFAQNPIPPAYQPGWRFPASTRTGDAWVTLMEGIH 210 Query: 181 TVGHADDSFHFDNEKPAHRALVGPVKLAKNLVTNADWLAFMKDGGYSTATLWLMDGFGTV 240 T+GH D+SFHFDNEKPAHRALVGPV+LA+NLVTNA+WLAFM+DGGY ATLWLMDGF Sbjct: 211 TIGHTDNSFHFDNEKPAHRALVGPVRLARNLVTNAEWLAFMQDGGYRKATLWLMDGFANA 270 Query: 241 SNEGWQAPGHWREIDGEWKIMTLGGLQPIDPSAPVCHVSYYEADAFARWAGKHLPTEMEW 300 EGW+APGHWR+ID EW++MTLGGLQPIDPSAPV HVSYYEADAFARW+GKHLPTEMEW Sbjct: 271 EREGWEAPGHWRKIDDEWQVMTLGGLQPIDPSAPVSHVSYYEADAFARWSGKHLPTEMEW 330 Query: 301 EVAARAGLLNDAYGIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATPA 360 EVAARAG LNDA+GIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATP Sbjct: 331 EVAARAGHLNDAFGIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATPD 390 Query: 361 GHSRVTYRNFFYPHHRWQFTGLRLADYA 388 HSRVTYRNFFYPHHRWQFTGLRLADYA Sbjct: 391 NHSRVTYRNFFYPHHRWQFTGLRLADYA 418 >ref|YP_004110210.1| hypothetical protein Rpdx1_3918 [Rhodopseudomonas palustris DX-1] gb|ADU45477.1| protein of unknown function DUF323 [Rhodopseudomonas palustris DX-1] Length = 464 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/385 (80%), Positives = 338/385 (87%) Query: 3 AYRAVRDETERRAAPLSPEDQLIQSMPDASPAKWHRAHTTWFFEQFLLGEHVKGYTPFHP 62 AYR VRDETERRAAPLSPEDQ++QSMPDASPAKWHRAHTTWFFEQFLLG H GY FHP Sbjct: 78 AYRTVRDETERRAAPLSPEDQVVQSMPDASPAKWHRAHTTWFFEQFLLGPHCPGYQVFHP 137 Query: 63 DYAYLFNSYYVSAGPRHARHQRGHLTRPTADEVTAYRRHVDAEVVKFFHTAGADKLEALV 122 DYA+LFNSYYVSAGPRH R RG LTRP EV AYRRHVD ++ +F TAGA KLE + Sbjct: 138 DYAFLFNSYYVSAGPRHTRAARGLLTRPGVAEVAAYRRHVDKAMLNWFATAGAAKLEQIA 197 Query: 123 PLVEVGLNHEQQHQELMYSDILHAFAQNPIPPAYDPAWRFPASHRGPGEWVTLNEGIHTV 182 PL+EVGLNHEQQHQEL+ +DILHAFAQNPIPPAYDPAWR PA+ R +WV L EGIH + Sbjct: 198 PLIEVGLNHEQQHQELLLTDILHAFAQNPIPPAYDPAWRLPATARDGEDWVALPEGIHPI 257 Query: 183 GHADDSFHFDNEKPAHRALVGPVKLAKNLVTNADWLAFMKDGGYSTATLWLMDGFGTVSN 242 GHA DSFHFDNEKP HRALVGPVKLA++LV+NA+WLAFM DGGY TATLWLMDGF Sbjct: 258 GHAGDSFHFDNEKPVHRALVGPVKLARHLVSNAEWLAFMADGGYRTATLWLMDGFACAER 317 Query: 243 EGWQAPGHWREIDGEWKIMTLGGLQPIDPSAPVCHVSYYEADAFARWAGKHLPTEMEWEV 302 E W+APGHWR++DGEWKIMTLGGLQ IDP APVCH+SYYEADAFARWAGKHLPTEMEWEV Sbjct: 318 ESWEAPGHWRQVDGEWKIMTLGGLQAIDPDAPVCHISYYEADAFARWAGKHLPTEMEWEV 377 Query: 303 AARAGLLNDAYGIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATPAGH 362 AARAG L DA+G VWQWTRS+Y+PYPGY+AIEGALGEYNGKFMVNQLVLRGSS ATP GH Sbjct: 378 AARAGHLPDAFGTVWQWTRSAYAPYPGYKAIEGALGEYNGKFMVNQLVLRGSSCATPEGH 437 Query: 363 SRVTYRNFFYPHHRWQFTGLRLADY 387 SRV+YRNFFYP+HRWQFTGLRLADY Sbjct: 438 SRVSYRNFFYPYHRWQFTGLRLADY 462 >ref|YP_576919.1| hypothetical protein Nham_1640 [Nitrobacter hamburgensis X14] gb|ABE62459.1| protein of unknown function DUF323 [Nitrobacter hamburgensis X14] Length = 418 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/388 (79%), Positives = 339/388 (87%) Query: 1 VDAYRAVRDETERRAAPLSPEDQLIQSMPDASPAKWHRAHTTWFFEQFLLGEHVKGYTPF 60 DA+ AVR ETERRA PLSPEDQ++QSMPDASP KWHRAHTTWF+EQFLLG+H GY PF Sbjct: 30 TDAFLAVRGETERRAGPLSPEDQMVQSMPDASPTKWHRAHTTWFWEQFLLGQHNPGYVPF 89 Query: 61 HPDYAYLFNSYYVSAGPRHARHQRGHLTRPTADEVTAYRRHVDAEVVKFFHTAGADKLEA 120 HPDYA+LFNSYYVSAGPR+ R QRGH+TRP A+EVTAYRRHVDA VVKFFH AG L Sbjct: 90 HPDYAFLFNSYYVSAGPRYVRAQRGHITRPGAEEVTAYRRHVDAAVVKFFHDAGDKMLAR 149 Query: 121 LVPLVEVGLNHEQQHQELMYSDILHAFAQNPIPPAYDPAWRFPASHRGPGEWVTLNEGIH 180 L PLVE GLNHEQQHQELM +DILHAFAQNPI PAYD +WRFP + G G W+TLN+GIH Sbjct: 150 LAPLVEAGLNHEQQHQELMLTDILHAFAQNPISPAYDGSWRFPTPNAGVGGWITLNQGIH 209 Query: 181 TVGHADDSFHFDNEKPAHRALVGPVKLAKNLVTNADWLAFMKDGGYSTATLWLMDGFGTV 240 T+GH DSFHFDNEKPAHRALVGPVKLA+NLVTNA+WLAFM DGGY TATLWLMDGF Sbjct: 210 TIGHQSDSFHFDNEKPAHRALVGPVKLARNLVTNANWLAFMDDGGYRTATLWLMDGFAAA 269 Query: 241 SNEGWQAPGHWREIDGEWKIMTLGGLQPIDPSAPVCHVSYYEADAFARWAGKHLPTEMEW 300 +NE W+APG+W + W++MTL GL+PID APVCHVSYYEADAFARW+GKHLPTEMEW Sbjct: 270 TNEEWEAPGYWHKTGDGWQVMTLAGLRPIDRDAPVCHVSYYEADAFARWSGKHLPTEMEW 329 Query: 301 EVAARAGLLNDAYGIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATPA 360 EVAARAG L+DA+G+VWQWTRSSYSPYPGY AIEGALGEYNGKFMVNQ VLRGSSLATP Sbjct: 330 EVAARAGQLDDAFGLVWQWTRSSYSPYPGYCAIEGALGEYNGKFMVNQFVLRGSSLATPE 389 Query: 361 GHSRVTYRNFFYPHHRWQFTGLRLADYA 388 GHSR+TYRNFFYPHHRWQFTGLRLADY Sbjct: 390 GHSRITYRNFFYPHHRWQFTGLRLADYG 417 >ref|ZP_07024916.1| protein of unknown function DUF323 [Afipia sp. 1NLS2] gb|EFI52058.1| protein of unknown function DUF323 [Afipia sp. 1NLS2] Length = 415 Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/387 (79%), Positives = 336/387 (86%) Query: 2 DAYRAVRDETERRAAPLSPEDQLIQSMPDASPAKWHRAHTTWFFEQFLLGEHVKGYTPFH 61 +AYR VRDETERRAA LS EDQLIQSMPDASPAKWHRAHTTWFFEQF+LG+HV GY FH Sbjct: 28 NAYRTVRDETERRAAHLSAEDQLIQSMPDASPAKWHRAHTTWFFEQFVLGQHVPGYKVFH 87 Query: 62 PDYAYLFNSYYVSAGPRHARHQRGHLTRPTADEVTAYRRHVDAEVVKFFHTAGADKLEAL 121 PDYA+LFNSYYVSAGPRHAR QRGHLTRP + V+AYR++VDA+++ F +A +KL A+ Sbjct: 88 PDYAFLFNSYYVSAGPRHARAQRGHLTRPGVEAVSAYRQYVDAQMLAFLESASEEKLRAI 147 Query: 122 VPLVEVGLNHEQQHQELMYSDILHAFAQNPIPPAYDPAWRFPASHRGPGEWVTLNEGIHT 181 PL+EVG NHEQQHQELM++DILHAFAQNPIPP YD W PA HRG W LNEGIHT Sbjct: 148 APLMEVGFNHEQQHQELMHTDILHAFAQNPIPPVYDENWSLPAPHRGGEPWFMLNEGIHT 207 Query: 182 VGHADDSFHFDNEKPAHRALVGPVKLAKNLVTNADWLAFMKDGGYSTATLWLMDGFGTVS 241 +GH DSFHFDNEKP HR LVGPVK+A++LVTN +WLAFM D GY TATLWLMDGF TV Sbjct: 208 IGHQGDSFHFDNEKPPHRVLVGPVKIARSLVTNKEWLAFMNDSGYRTATLWLMDGFATVE 267 Query: 242 NEGWQAPGHWREIDGEWKIMTLGGLQPIDPSAPVCHVSYYEADAFARWAGKHLPTEMEWE 301 E W APGHWR+I GEW IMTL GL+P+DP APVCHVSYYEADAFARW+GKHLPTEMEWE Sbjct: 268 REEWNAPGHWRKIGGEWHIMTLAGLKPVDPDAPVCHVSYYEADAFARWSGKHLPTEMEWE 327 Query: 302 VAARAGLLNDAYGIVWQWTRSSYSPYPGYRAIEGALGEYNGKFMVNQLVLRGSSLATPAG 361 VAARA LND YGIVWQWTRSSY+PYPGYRAIEGALGEYNGKFMVNQ VLRGSS+ATP G Sbjct: 328 VAARASQLNDTYGIVWQWTRSSYAPYPGYRAIEGALGEYNGKFMVNQYVLRGSSVATPEG 387 Query: 362 HSRVTYRNFFYPHHRWQFTGLRLADYA 388 H+RV+YRNFFYPHHRWQFTGLRLADYA Sbjct: 388 HARVSYRNFFYPHHRWQFTGLRLADYA 414