BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0111.p (371 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004010871.1| RND family efflux transporter MFP subunit [R... 343 2e-92 ref|YP_570267.1| secretion protein HlyD [Rhodopseudomonas palust... 343 4e-92 ref|ZP_08868053.1| efflux transporter, RND family, MFP subunit [... 336 3e-90 ref|ZP_08387576.1| efflux transporter, RND family, MFP subunit [... 319 4e-85 ref|XP_002534472.1| Multidrug resistance protein mdtA precursor,... 319 5e-85 >ref|YP_004010871.1| RND family efflux transporter MFP subunit [Rhodomicrobium vannielii ATCC 17100] gb|ADP69772.1| efflux transporter, RND family, MFP subunit [Rhodomicrobium vannielii ATCC 17100] Length = 364 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 187/362 (51%), Positives = 250/362 (69%), Gaps = 4/362 (1%) Query: 6 LSSRRWLGLRAKPFGIAVLLLVCAAAGLFAWRAGGSSASAKATAEAPPTPVAAMVVRAET 65 L SR + +A+ +L +G++AWR+ +S PP V A V + Sbjct: 4 LQSRSFFAKSVSVHILALAILTTVFSGVYAWRSMRLQSSGPQAL--PPIEVEAWTVEPKA 61 Query: 66 LPRSIEAIGSLQAVRQVILAPEVAGRVTAINFDAGTDVAEGAPLVQLYDAPLRAARTVAV 125 +P+ ++AIGSL +V +V +APEVAGRV AI+F+AG +VA GA L++LYDAP RA A Sbjct: 62 VPQELDAIGSLSSVNEVTIAPEVAGRVIAIDFEAGVEVAAGAELLRLYDAPERADLETAK 121 Query: 126 SKGRFAQLQEKRSQGLAPSGFVTQETLQQRQEDLKQADASLDQLDAQIAQMTIRAPFAGQ 185 +K FA+LQ R+Q LAP G +++ LQQR +L Q +A++ +A++ Q TIRAPFAG+ Sbjct: 122 AKLEFARLQFDRAQELAPKGAESRQMLQQRAAELAQGEAAVRLAEARLTQRTIRAPFAGR 181 Query: 186 VGLRKVNLGQYVNAGDALATLTALDQLYANFTVPQQRLSNLKVGGAVTIRTDAFPDRVFE 245 +G+R+VNLGQYVNAG+ L TLTALD+LY NFT+PQQ LS L GG V++RTDA+P+R FE Sbjct: 182 LGVRRVNLGQYVNAGEPLVTLTALDRLYVNFTLPQQELSKLANGGKVSVRTDAWPERDFE 241 Query: 246 AKINAIEPQVAEDTRNVLVQALFSNPDRLLRPGLFVMVNVVLPPQPDAIVVPVTAIQTSA 305 A+INAIEP VA +TRN+ VQA N D LRPGL+V V+LPP+ AI+VPVTA+ T Sbjct: 242 ARINAIEPVVAAETRNISVQATLGNADGALRPGLYVTAKVILPPRARAILVPVTAVVTGP 301 Query: 306 SGESVLVVRDNKAVGVAVKTGQRIGERVVVEQGLAPGDHVVTAGQLRVMPGAAVQ--TTM 363 SG++ VVR K V V+TG+R G VVVE+GL GD V+T GQLR+ PGAA+ TTM Sbjct: 302 SGDTAYVVRGGKVEIVPVETGRRFGPHVVVERGLKGGDVVITTGQLRLQPGAAITLATTM 361 Query: 364 AE 365 A+ Sbjct: 362 AK 363 >ref|YP_570267.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5] gb|ABE40366.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5] Length = 360 Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 189/344 (54%), Positives = 236/344 (68%), Gaps = 2/344 (0%) Query: 16 AKPFGIAVLLLVCAAAGLFAWRAGGSSASAKATAEAPPTPVAAMVVRAETLPRSIEAIGS 75 A+P I ++ + A +FAWR A +T + P M V E +P+S+EA+G+ Sbjct: 15 ARPVAITIVAIGVGFALIFAWRL--MRQPAVSTGASAPISAPLMTVSTENVPQSLEAVGT 72 Query: 76 LQAVRQVILAPEVAGRVTAINFDAGTDVAEGAPLVQLYDAPLRAARTVAVSKGRFAQLQE 135 L+AVRQV LA EV GRV A++FDAG VA G L+QLYDAP RA A ++ FA+ + Sbjct: 73 LEAVRQVTLAAEVPGRVVALSFDAGETVAAGRTLIQLYDAPERADLAAAQARVDFAKHEF 132 Query: 136 KRSQGLAPSGFVTQETLQQRQEDLKQADASLDQLDAQIAQMTIRAPFAGQVGLRKVNLGQ 195 RSQ LAPSG QQR+ +L QA A+ +Q++A+IAQ +RAPFAG +GLRKVNLGQ Sbjct: 133 DRSQALAPSGSEPVRIYQQRRAELAQARAATEQIEARIAQKAVRAPFAGVIGLRKVNLGQ 192 Query: 196 YVNAGDALATLTALDQLYANFTVPQQRLSNLKVGGAVTIRTDAFPDRVFEAKINAIEPQV 255 YVNAGD LAT+T LD LY NFTVPQQRL+ L VG VT+ +DA P R F A++NAIEPQV Sbjct: 193 YVNAGDRLATITDLDLLYVNFTVPQQRLAELAVGARVTLVSDAVPGREFIARMNAIEPQV 252 Query: 256 AEDTRNVLVQALFSNPDRLLRPGLFVMVNVVLPPQPDAIVVPVTAIQTSASGESVLVVRD 315 DTRNV QA+ N D +LRPGL+ V + LP +AI VP TAI TS SG++VLVVRD Sbjct: 253 GVDTRNVQAQAILDNRDHVLRPGLYGTVRMTLPALSNAITVPTTAIITSPSGDTVLVVRD 312 Query: 316 NKAVGVAVKTGQRIGERVVVEQGLAPGDHVVTAGQLRVMPGAAV 359 + A V+V TG RIG+RVVV +GL GD V+TAGQLRV PG V Sbjct: 313 DVAYSVSVITGARIGDRVVVARGLVAGDRVITAGQLRVQPGVRV 356 >ref|ZP_08868053.1| efflux transporter, RND family, MFP subunit [Azospirillum amazonense Y2] gb|EGY02361.1| efflux transporter, RND family, MFP subunit [Azospirillum amazonense Y2] Length = 377 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 193/368 (52%), Positives = 246/368 (66%), Gaps = 23/368 (6%) Query: 4 ASLSSRRWLGLRAKPFGIAVLLLVCAAAGLFAWR---AGGSSASAKATAEAPPTPVAAMV 60 A L ++R L A F +A+++L GLF+WR G A A PP V+AM Sbjct: 16 AFLMTKRIL---AAAFFMAIVVL-----GLFSWRQLRMGPPGAMA-----FPPADVSAMT 62 Query: 61 VRAETLPRSIEAIGSLQAVRQVILAPEVAGRVTAINFDAGTDVAEGAPLVQLYDAPLRAA 120 V A ++ ++ A+GSLQAV+ V LAPE GRV AINF AG V G PLVQLYD P RA Sbjct: 63 VEAHSVGSTLRAVGSLQAVQGVTLAPEQPGRVVAINFQAGQTVKAGTPLVQLYDGPERAG 122 Query: 121 RTVAVSKGRFAQLQEKRSQGLAPSGFVTQETLQQRQEDLKQADASLDQLDAQIAQMTIRA 180 A +K FA+LQ RS GLA +G ++ LQQRQ + QA A++ Q +AQI Q TI A Sbjct: 123 LADAEAKAEFARLQLDRSLGLASTGAEAKQVLQQRQSEFTQAKAAIAQYNAQIVQKTIVA 182 Query: 181 PFAGQVGLRKVNLGQYVNAGDALATLTALDQLYANFTVPQQRLSNLKVGGAVTIRTDAFP 240 PF G++G+R+ NLGQY++AGD +ATLT+LD LY NFTVPQQ LS L VGG+V + +DAFP Sbjct: 183 PFDGEIGVRRANLGQYLHAGDPIATLTSLDSLYVNFTVPQQNLSALHVGGSVDVSSDAFP 242 Query: 241 DRVFEAKINAIEPQVAEDTRNVLVQALFSNPDRLLRPGLFVMVNVVLPPQPDAIVVPVTA 300 ++ F +I IEP + +DTRNV VQA SN D LRPG++V + VVLP + AIVVP+TA Sbjct: 243 NQSFNGRITTIEPVIGDDTRNVTVQATISNADHSLRPGMYVTIGVVLPTR-SAIVVPLTA 301 Query: 301 IQTSASGESVLVVRDN------KAVGVAVKTGQRIGERVVVEQGLAPGDHVVTAGQLRVM 354 +QTSASG++V+VVR + KA V VK GQ+ G V+VE GL PGD VVT GQLR+ Sbjct: 302 VQTSASGDAVVVVRGSDAQHLGKAEFVPVKLGQQTGGDVIVEAGLKPGDVVVTVGQLRLQ 361 Query: 355 PGAAVQTT 362 PG AV+ T Sbjct: 362 PGGAVKVT 369 >ref|ZP_08387576.1| efflux transporter, RND family, MFP subunit [Sphingomonas sp. S17] gb|EGI56245.1| efflux transporter, RND family, MFP subunit [Sphingomonas sp. S17] Length = 359 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 166/301 (55%), Positives = 219/301 (72%), Gaps = 6/301 (1%) Query: 66 LPRSIEAIGSLQAVRQVILAPEVAGRVTAINFDAGTDVAEGAPLVQLYDAPLRAARTVAV 125 +P ++EA+GSL+AV++V LAPEVAGRVTAI G V+ GA LVQLYDAP +A R A+ Sbjct: 45 VPSALEAVGSLRAVQEVTLAPEVAGRVTAIALQPGVRVSRGAALVQLYDAPEQADRVAAL 104 Query: 126 SKGRFAQLQEKRSQGLAPSGFVTQETLQQRQEDLKQADASLDQLDAQIAQMTIRAPFAGQ 185 ++ + A Q R++ L P G +QE LQQRQ + QA A++ QLDA+IAQ IRAPF+GQ Sbjct: 105 ARMKLAAAQLARTRSLVPGGAESQELLQQRQAEYDQAAAAVRQLDARIAQKRIRAPFSGQ 164 Query: 186 VGLRKVNLGQYVNAGDALATLTALDQLYANFTVPQQRLSNLKVGGAVTIRTDAFPDRVFE 245 +G+R++NLGQY+N GDA+ATLTA+D+LYA+FTVPQQ L L++G V + TDA+P R F Sbjct: 165 IGIRRINLGQYLNPGDAVATLTAIDRLYADFTVPQQDLGKLRLGATVRLTTDAWPSRTFR 224 Query: 246 AKINAIEPQVAEDTRNVLVQALFSNPDRLLRPGLFVMVNVVLPPQPDAIVVPVTAIQTSA 305 ++ IEP++ ED+RNV+VQAL N D LRPG++V + LPP+ +A+VVP TAIQTSA Sbjct: 225 GRVTTIEPRIGEDSRNVMVQALVINSDSALRPGMYVTAALELPPRSNALVVPATAIQTSA 284 Query: 306 SGESVLVVRDN------KAVGVAVKTGQRIGERVVVEQGLAPGDHVVTAGQLRVMPGAAV 359 SG+SV V+R + KA V V G+RIG V+V G+ PGD VV GQLRV PGA V Sbjct: 285 SGDSVTVIRGHVPSRAGKAEIVPVVIGRRIGNSVIVTSGIRPGDVVVAEGQLRVQPGAQV 344 Query: 360 Q 360 + Sbjct: 345 R 345 >ref|XP_002534472.1| Multidrug resistance protein mdtA precursor, putative [Ricinus communis] gb|EEF27902.1| Multidrug resistance protein mdtA precursor, putative [Ricinus communis] Length = 382 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 196/356 (55%), Positives = 251/356 (70%), Gaps = 16/356 (4%) Query: 15 RAKPFGIAVLLLVCAAAGLFAWRAGGSSASAKATAEAPPTPVAAMVVRAETLPRSI---- 70 RAKP I+V+ LV L+AWRA S + + PP PV+ +RAE PRS+ Sbjct: 8 RAKPIVISVVGLVVVFGLLYAWRAARSGGAEQQVM--PPMPVS--TIRAE--PRSVAEEW 61 Query: 71 EAIGSLQAVRQVILAPEVAGRVTAINFDAGTDVAEGAPLVQLYDAPLRAARTVAVSKGRF 130 +A+GSLQAV +V+LAP+ +GRVTA+NFDAG V EGA L+QLYDAP +A R AV+K F Sbjct: 62 QAVGSLQAVHEVLLAPDTSGRVTAVNFDAGQSVKEGAVLIQLYDAPEQADRAAAVAKADF 121 Query: 131 AQLQEKRSQGLAPSGFVTQETLQQRQEDLKQADASLDQLDAQIAQMTIRAPFAGQVGLRK 190 AQLQ RSQ LA +G +E L+Q + D QA A++ QLDA+I Q IRAPF+GQ+G+R+ Sbjct: 122 AQLQLWRSQALASTGAEPRELLEQHKADAAQAAAAVRQLDARIQQKAIRAPFSGQLGIRR 181 Query: 191 VNLGQYVNAGDALATLTALDQLYANFTVPQQRLSNLKVGGAVTIRTDAFPDRVFEAKINA 250 +NLGQY+NAGDA+ATLT LD LY NFT+PQQ L L G V + DA P RVF A+I+A Sbjct: 182 INLGQYLNAGDAIATLTQLDPLYVNFTLPQQDLPRLTSGAPVQVTVDAVPGRVFTARISA 241 Query: 251 IEPQVAEDTRNVLVQALFSNPDRLLRPGLFVMVNVVLPPQPDAIVVPVTAIQTSASGESV 310 IEP++ +TRNV VQAL N DRLL+PG++V +VLP D IV+P+TAIQTSASG+SV Sbjct: 242 IEPRIDGETRNVAVQALLPNTDRLLKPGMYVTARLVLPATTDNIVLPLTAIQTSASGDSV 301 Query: 311 LVVRD------NKAVGVAVKTGQRIGERVVVEQGLAPGDHVVTAGQLRVMPGAAVQ 360 +VV+ K+V V V TG+R+GE V+V QG+ PGD VV AGQ R+ PGA V+ Sbjct: 302 VVVKGADAQGIGKSVAVPVVTGRRLGEEVLVSQGVKPGDIVVMAGQNRLPPGATVK 357