BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0110.p (158 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001371487.1| MerR family transcriptional regulator [Ochro... 186 1e-45 ref|YP_432727.1| redox-sensitive transcriptional activator SoxR ... 186 1e-45 ref|YP_970628.1| MerR family transcriptional regulator [Acidovor... 183 9e-45 ref|NP_890689.1| MerR family transcriptional regulator [Bordetel... 183 9e-45 ref|NP_881430.1| MerR family transcriptional regulator [Bordetel... 182 1e-44 >ref|YP_001371487.1| MerR family transcriptional regulator [Ochrobactrum anthropi ATCC 49188] gb|ABS15658.1| putative transcriptional regulator, MerR family [Ochrobactrum anthropi ATCC 49188] Length = 161 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 87/146 (59%), Positives = 112/146 (76%) Query: 3 LAQELSVGEVARRSGLAVSTLHFYESKGLIASRRTGGNQRRYMRGVLRRIAVIRIAQRAG 62 L + L+VG+V+RR+G+AVST+HFYE+KGLI RT GNQRRY R VLRRIA+I+IAQRAG Sbjct: 12 LKKSLAVGDVSRRAGVAVSTVHFYETKGLIEGWRTEGNQRRYHRAVLRRIAIIKIAQRAG 71 Query: 63 IPLDEIRQTFAAIPLDRAPTVREWERAMRAWTETLEQRINDLTDLRDKLFNCIGCGCLSV 122 IPL IR+ A +P D PTV +W R AW + L++RI+ L LRD++ +CIGCGCLS+ Sbjct: 72 IPLVIIREALADLPHDHVPTVEDWRRFSEAWKDMLQERIDSLMQLRDQITSCIGCGCLSL 131 Query: 123 TDCPLRNCDDKLGAQGPGPRILITAA 148 ++CPLRN DD LG QG GPR L+ + Sbjct: 132 SECPLRNPDDVLGQQGAGPRRLMVKS 157 >ref|YP_432727.1| redox-sensitive transcriptional activator SoxR [Hahella chejuensis KCTC 2396] gb|ABC28302.1| redox-sensitive transcriptional activator SoxR [Hahella chejuensis KCTC 2396] Length = 153 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 85/140 (60%), Positives = 105/140 (75%) Query: 5 QELSVGEVARRSGLAVSTLHFYESKGLIASRRTGGNQRRYMRGVLRRIAVIRIAQRAGIP 64 +ELSVGEVA+RSG+AVSTLHFYESKGL+ S R GNQRRY RGVLRR+A+I++AQR G+P Sbjct: 11 KELSVGEVAKRSGVAVSTLHFYESKGLLKSNRNSGNQRRYPRGVLRRVAIIKVAQRTGVP 70 Query: 65 LDEIRQTFAAIPLDRAPTVREWERAMRAWTETLEQRINDLTDLRDKLFNCIGCGCLSVTD 124 L I++ + +P RAP+ +W R W + L RI LT LRD+L CIGCGCLS+ D Sbjct: 71 LSAIKEALSTLPEGRAPSAADWRRLSEQWKQVLNDRIRKLTQLRDQLDECIGCGCLSMED 130 Query: 125 CPLRNCDDKLGAQGPGPRIL 144 CPLRN D+L QGPGP +L Sbjct: 131 CPLRNPWDELAEQGPGPHLL 150 >ref|YP_970628.1| MerR family transcriptional regulator [Acidovorax citrulli AAC00-1] gb|ABM32854.1| transcriptional regulator, MerR family [Acidovorax citrulli AAC00-1] Length = 184 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 93/146 (63%), Positives = 105/146 (71%) Query: 6 ELSVGEVARRSGLAVSTLHFYESKGLIASRRTGGNQRRYMRGVLRRIAVIRIAQRAGIPL 65 EL+VGEVA RSGLAVS LHFYESKGLIAS R+ GNQRRY R VLRR+AVI+IAQR G+PL Sbjct: 36 ELTVGEVAERSGLAVSALHFYESKGLIASVRSAGNQRRYPRSVLRRVAVIKIAQRMGLPL 95 Query: 66 DEIRQTFAAIPLDRAPTVREWERAMRAWTETLEQRINDLTDLRDKLFNCIGCGCLSVTDC 125 I A+P R PTV +W R AW E L++RI LT LRD+L CIGCGCLS+ C Sbjct: 96 ATIAGALQALPEGRTPTVADWRRLSAAWREELDERIATLTRLRDQLDGCIGCGCLSLRAC 155 Query: 126 PLRNCDDKLGAQGPGPRILITAAERR 151 PLRN DD LGA+G GP A RR Sbjct: 156 PLRNPDDALGAEGAGPHFSPDPAARR 181 >ref|NP_890689.1| MerR family transcriptional regulator [Bordetella bronchiseptica RB50] emb|CAE34518.1| putative MerR-family transcriptional regulator [Bordetella bronchiseptica RB50] Length = 154 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 89/137 (64%), Positives = 102/137 (74%) Query: 7 LSVGEVARRSGLAVSTLHFYESKGLIASRRTGGNQRRYMRGVLRRIAVIRIAQRAGIPLD 66 LSVGEVA R+GLAVS LHFYE+KGLIAS RT GNQRRY R VLRR+AVIR+AQR G+PL Sbjct: 14 LSVGEVAARTGLAVSALHFYEAKGLIASTRTAGNQRRYARAVLRRVAVIRVAQRMGLPLA 73 Query: 67 EIRQTFAAIPLDRAPTVREWERAMRAWTETLEQRINDLTDLRDKLFNCIGCGCLSVTDCP 126 I Q A +P RAPTV +W R RAW + L+QRI LT LRD+L CIGCGCLS+ +CP Sbjct: 74 AIAQALATLPTSRAPTVADWRRLSRAWRQELDQRILGLTQLRDQLDGCIGCGCLSLRECP 133 Query: 127 LRNCDDKLGAQGPGPRI 143 LRN DD + G GP Sbjct: 134 LRNPDDAMACLGAGPHF 150 >ref|NP_881430.1| MerR family transcriptional regulator [Bordetella pertussis Tohama I] ref|NP_885863.1| MerR family transcriptional regulator [Bordetella parapertussis 12822] emb|CAE43109.1| putative MerR-family transcriptional regulator [Bordetella pertussis Tohama I] emb|CAE38991.1| putative MerR-family transcriptional regulator [Bordetella parapertussis] gb|AEE68035.1| MerR family transcriptional regulator [Bordetella pertussis CS] Length = 154 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 89/137 (64%), Positives = 102/137 (74%) Query: 7 LSVGEVARRSGLAVSTLHFYESKGLIASRRTGGNQRRYMRGVLRRIAVIRIAQRAGIPLD 66 LSVGEVA R+GLAVS LHFYE+KGLIAS RT GNQRRY R VLRR+AVIR+AQR G+PL Sbjct: 14 LSVGEVAARTGLAVSALHFYEAKGLIASTRTAGNQRRYARAVLRRVAVIRVAQRMGLPLA 73 Query: 67 EIRQTFAAIPLDRAPTVREWERAMRAWTETLEQRINDLTDLRDKLFNCIGCGCLSVTDCP 126 I Q A +P RAPTV +W R RAW + L+QRI LT LRD+L CIGCGCLS+ +CP Sbjct: 74 AIAQALATLPTSRAPTVADWRRLSRAWRQELDQRILGLTQLRDQLDGCIGCGCLSLRECP 133 Query: 127 LRNCDDKLGAQGPGPRI 143 LRN DD + G GP Sbjct: 134 LRNPDDAMARLGAGPHF 150