BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0096.p         (57 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001241121.1| hypothetical protein BBta_5224 [Bradyrhizobi...    34   6.4  

>ref|YP_001241121.1| hypothetical protein BBta_5224 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37215.1| hypothetical protein BBta_5224 [Bradyrhizobium sp. BTAi1]
          Length = 172

 Score = 34.3 bits (77), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 33  ESVDKAIADENKAVERRTKGICRGC 57
           +S D  I  EN  V+R+ K ICRGC
Sbjct: 148 DSTDATIQQENSTVDRKVKSICRGC 172