BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0086.p         (53 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004109717.1| nitrate ABC transporter inner membrane subun...   104   4e-21
ref|NP_947458.1| nitrate transport system permease [Rhodopseudom...   104   4e-21
ref|YP_783537.1| nitrate ABC transporter inner membrane subunit ...   104   4e-21
ref|NP_772373.1| nitrate ABC transporter permease protein [Brady...   104   4e-21
ref|YP_485673.1| nitrate transport permease [Rhodopseudomonas pa...   103   7e-21

>ref|YP_004109717.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas
           palustris DX-1]
 gb|ADU44984.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris DX-1]
          Length = 279

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/53 (96%), Positives = 52/53 (98%)

Query: 1   MLVGGTGIGYFVWNEWNNLSITNVIIAILLIGLVGMLLDQVLARFTRMVTFPE 53
           MLVGGTGIGYFVWNEWNNLSI NVIIAIL+IGLVGMLLDQVLARFTRMVTFPE
Sbjct: 227 MLVGGTGIGYFVWNEWNNLSIVNVIIAILMIGLVGMLLDQVLARFTRMVTFPE 279


>ref|NP_947458.1| nitrate transport system permease [Rhodopseudomonas palustris
           CGA009]
 emb|CAE27554.1| possible nitrate transport system permease protein
           [Rhodopseudomonas palustris CGA009]
          Length = 279

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/53 (96%), Positives = 52/53 (98%)

Query: 1   MLVGGTGIGYFVWNEWNNLSITNVIIAILLIGLVGMLLDQVLARFTRMVTFPE 53
           MLVGGTGIGYFVWNEWNNLSI NVIIAIL+IGLVGMLLDQVLARFTRMVTFPE
Sbjct: 227 MLVGGTGIGYFVWNEWNNLSIVNVIIAILMIGLVGMLLDQVLARFTRMVTFPE 279


>ref|YP_783537.1| nitrate ABC transporter inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
 gb|ABJ08557.1| nitrate ABC transporter, inner membrane subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 279

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 50/53 (94%), Positives = 53/53 (100%)

Query: 1   MLVGGTGIGYFVWNEWNNLSITNVIIAILLIGLVGMLLDQVLARFTRMVTFPE 53
           MLVGGTGIGYFVWNEWNNLSITNVIIAIL+IG+VGMLLDQ+LARFTRMVTFPE
Sbjct: 227 MLVGGTGIGYFVWNEWNNLSITNVIIAILMIGVVGMLLDQILARFTRMVTFPE 279


>ref|NP_772373.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 dbj|BAC50998.1| nitrate ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 335

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 50/53 (94%), Positives = 52/53 (98%)

Query: 1   MLVGGTGIGYFVWNEWNNLSITNVIIAILLIGLVGMLLDQVLARFTRMVTFPE 53
           MLVGGTGIGYFVWNEWNNLSITNVIIAILLIG+VGMLLDQ+LARFT MVTFPE
Sbjct: 283 MLVGGTGIGYFVWNEWNNLSITNVIIAILLIGIVGMLLDQILARFTHMVTFPE 335


>ref|YP_485673.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
 gb|ABD06762.1| nitrate transport permease [Rhodopseudomonas palustris HaA2]
          Length = 279

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/53 (94%), Positives = 52/53 (98%)

Query: 1   MLVGGTGIGYFVWNEWNNLSITNVIIAILLIGLVGMLLDQVLARFTRMVTFPE 53
           MLVGGTGIGYFVWNEWNNLSI NVIIAILLIG+VGMLLDQ+LARFTRMVTFPE
Sbjct: 227 MLVGGTGIGYFVWNEWNNLSIVNVIIAILLIGVVGMLLDQILARFTRMVTFPE 279