BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0071.p (187 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770237.1| hypothetical protein blr3597 [Bradyrhizobium ja... 317 5e-85 ref|YP_002362648.1| hypothetical protein Msil_2356 [Methylocella... 115 4e-24 ref|YP_004134510.1| hypothetical protein Mesci_6360 [Mesorhizobi... 109 2e-22 ref|YP_002498288.1| hypothetical protein Mnod_3044 [Methylobacte... 92 5e-17 ref|ZP_01546333.1| hypothetical protein SIAM614_12778 [Stappia a... 90 2e-16 >ref|NP_770237.1| hypothetical protein blr3597 [Bradyrhizobium japonicum USDA 110] dbj|BAC48862.1| blr3597 [Bradyrhizobium japonicum USDA 110] Length = 187 Score = 317 bits (812), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 163/187 (87%), Positives = 172/187 (91%) Query: 1 MNQVRFSTVHDLFEAYPLARYDVGKAAPDKLSLDFLQEAADAGNWHQAVSFCAYLLPRRV 60 M QVRF TV DLF+AYPLARYDVGKA DK SLDFLQEAADA NW+QAVS+CAYLLPRRV Sbjct: 1 MGQVRFGTVRDLFQAYPLARYDVGKADADKPSLDFLQEAADARNWYQAVSYCAYLLPRRV 60 Query: 61 AVAWGCRSLRQMFDHFDGNEGRSLNFAETWVRQPDEQSRNKALAVGNANDPEQPATWLAL 120 A+AWGCRSLR+MFDHFD + RSLN ETWVRQPDEQSRNKALAVGNANDPEQPATWLAL Sbjct: 61 AIAWGCRSLRRMFDHFDAYDSRSLNVVETWVRQPDEQSRNKALAVGNANDPEQPATWLAL 120 Query: 121 AAGWSGGSVVPAEFAPVEAKPDQTARAVRAALLIGLCRLTRESRDRIMTACLEDGIQLAR 180 AAGWSGGSVVP EFAPVEAKPDQ ARAVRAALLIGLCRL R+SRD+IMT+CLEDGIQLAR Sbjct: 121 AAGWSGGSVVPPEFAPVEAKPDQAARAVRAALLIGLCRLPRDSRDQIMTSCLEDGIQLAR 180 Query: 181 GEPRPPR 187 GEPRPPR Sbjct: 181 GEPRPPR 187 >ref|YP_002362648.1| hypothetical protein Msil_2356 [Methylocella silvestris BL2] gb|ACK51286.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 180 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/181 (43%), Positives = 110/181 (60%), Gaps = 5/181 (2%) Query: 1 MNQVRFSTVHDLFEAYPLARYDVGKAAPDKLSLDFLQEAADAGNWHQAVSFCAYLLPRRV 60 M ++RF+T DL+EAYP AR D+G AA SLDFL + A A+SFCAYLLPRR Sbjct: 1 MPRLRFATAQDLYEAYPTARSDIGVAANAAPSLDFLAALSSADALKAALSFCAYLLPRRE 60 Query: 61 AVAWGCRSLRQMFDHFDGNEGRSLNFAETWVRQPDEQSRNKALAVGNANDPEQPATWLAL 120 AVAWGC+ LRQ +E R L +E WVR+P+E++R +AL + +D + +TW+A Sbjct: 61 AVAWGCQCLRQWSGLNAADEAR-LAASEAWVREPEERNRRRALDLAERSDIKDASTWIAF 119 Query: 121 AAGWSGGSVV--PAEFAPVEAKPDQTARAVRAALLIGLCRLTRESRDRIMTACLEDGIQL 178 AAG +GG + F P+ TA+AVR AL++ + E+R I LE G+++ Sbjct: 120 AAGRAGGQIAIDGDHFTPMPQYA--TAQAVRIALILAGAAGSFEARAEIQRRWLELGLRI 177 Query: 179 A 179 A Sbjct: 178 A 178 >ref|YP_004134510.1| hypothetical protein Mesci_6360 [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV15336.1| hypothetical protein Mesci_6360 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 195 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 90/182 (49%), Gaps = 2/182 (1%) Query: 2 NQVRFSTVHDLFEAYPLARYDVGKAAPDKLSLDFLQEAADAGNWHQAVSFCAYLLPRRVA 61 N +RF T DLF A P D+ D+ S++F ++ +AV+FCAYLLP R A Sbjct: 6 NGLRFKTARDLFAACPAIARDMRSLPTDQRSIEFCRDLLAGRVPEEAVTFCAYLLPERAA 65 Query: 62 VAWGCRSLRQMFDHFDGNEGRSLNFAETWVRQPDEQSRNKALAVGNANDPEQPATWLALA 121 V W L + D D + + L WV +PD AL+ A P P W+ALA Sbjct: 66 VWWAHECLSHLADLLDETDHQLLPLVHNWVGEPDSLRHQAALSTAGATPPTTPVGWIALA 125 Query: 122 AGW-SGGSVVPAEFAPVEAKPDQTARAVRAALLIGLCRLTRESRDRIMTACLEDGIQLAR 180 AGW GS A AP P A A+ A +L GL R+ R +++A +E GIQ+A Sbjct: 126 AGWRDNGSARAATMAPA-LLPFPAAHAINAGILAGLARVALADRFAVLSAFVEMGIQMAE 184 Query: 181 GE 182 E Sbjct: 185 IE 186 >ref|YP_002498288.1| hypothetical protein Mnod_3044 [Methylobacterium nodulans ORS 2060] gb|ACL57985.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 183 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 86/178 (48%), Gaps = 1/178 (0%) Query: 1 MNQVRFSTVHDLFEAYPLARYDVGKAAPDKLSLDFLQEAADAGNWHQAVSFCAYLLPRRV 60 M Q RF+ ++FEA+P + D+ F + A AV+FCA+ LPRR Sbjct: 1 MPQPRFTRAREVFEAFPPVAEMIATPPTDEAPARFARALAAGPTPEDAVAFCAHALPRRE 60 Query: 61 AVAWGCRSLRQMFDHFDGNEGRSLNFAETWVRQPDEQSRNKALAVGNANDPEQPATWLAL 120 AV W C +R + G E +L AE W P E R ALA G D WLAL Sbjct: 61 AVWWACVCVRALLGIRPGEEDDALRAAEAWGSDPGEAQRRAALARGE-GDRRLATAWLAL 119 Query: 121 AAGWSGGSVVPAEFAPVEAKPDQTARAVRAALLIGLCRLTRESRDRIMTACLEDGIQL 178 AA WSGGS+ P P A P TARA A+L L R+T R + AC+E + L Sbjct: 120 AAAWSGGSLAPPGEPPRPALPHMTARAATIAILTALARVTARERAARLGACVEAALGL 177 >ref|ZP_01546333.1| hypothetical protein SIAM614_12778 [Stappia aggregata IAM 12614] gb|EAV44889.1| hypothetical protein SIAM614_12778 [Stappia aggregata IAM 12614] Length = 176 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 4/159 (2%) Query: 27 APDKLSLDFLQEAADAGNWHQAVSFCAYLLPRRVAVAWGCRSLRQMFDHFDGNEGRSLNF 86 APD +L+ Q A A+++ A++LP+R V WG + + ++ + L Sbjct: 10 APDAYALELQQSEAPL----SAIAYFAHVLPKRETVWWGMNCVAGLDQAKTEHDRQVLQL 65 Query: 87 AETWVRQPDEQSRNKALAVGNANDPEQPATWLALAAGWSGGSVVPAEFAPVEAKPDQTAR 146 +ETWVR+ DE +R+ A A + + W+ LAAGWSGGS+ P VE D TA+ Sbjct: 66 SETWVREGDEDARSAVHAAAEAAKMDSASVWIGLAAGWSGGSLSPNPEQRVEMPDDLTAK 125 Query: 147 AVRAALLIGLCRLTRESRDRIMTACLEDGIQLARGEPRP 185 AV A+LI L + + R+ + +CL G+ A G P Sbjct: 126 AVNTAVLIALGTVEPDKRNDALKSCLSAGLSFAEGGTMP 164