BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0067.p         (159 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770233.1| hypothetical protein bll3593 [Bradyrhizobium ja...   300   4e-80
ref|YP_002362653.1| type VI secretion protein, EvpB/VC_A0108 fam...   237   4e-61
ref|YP_002498284.1| EvpB family type VI secretion protein [Methy...   236   6e-61
ref|ZP_02907707.1| type VI secretion protein, EvpB/VC_A0108 fami...   176   1e-42
ref|ZP_03270398.1| type VI secretion protein, EvpB/VC_A0108 fami...   173   7e-42

>ref|NP_770233.1| hypothetical protein bll3593 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48858.1| bll3593 [Bradyrhizobium japonicum USDA 110]
          Length = 503

 Score =  300 bits (768), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 145/153 (94%), Positives = 149/153 (97%)

Query: 1   MAKEAIHKETTTKVGTVEADEFAALLKQSFKPRTERAATEVENAVSTLVQEALKDTSVIK 60
           MAKEA+HKE+TT+V TVEADEFA LLKQSFKPRTERAATEVENAVSTLVQEALKDTSVIK
Sbjct: 4   MAKEAVHKESTTQVKTVEADEFATLLKQSFKPRTERAATEVENAVSTLVQEALKDTSVIK 63

Query: 61  SDVLDTIEEMIARIDQKLTAQMNEILHAPEFQAIESAWRGLHYLVFNSETDANLKIRVMN 120
           SDVLDTIEEMIARIDQKLTAQMNEILH PEFQ+IESAWRGLHYLVFNSETDANLKIRVMN
Sbjct: 64  SDVLDTIEEMIARIDQKLTAQMNEILHTPEFQSIESAWRGLHYLVFNSETDANLKIRVMN 123

Query: 121 VSKNELYRNLRLYPDARWDQSPLFKQIYEYEXG 153
           VSKNELYRNLRLYPDARWDQSPLFKQIYEYE G
Sbjct: 124 VSKNELYRNLRLYPDARWDQSPLFKQIYEYEFG 156


>ref|YP_002362653.1| type VI secretion protein, EvpB/VC_A0108 family [Methylocella
           silvestris BL2]
 gb|ACK51291.1| type VI secretion protein, EvpB/VC_A0108 family [Methylocella
           silvestris BL2]
          Length = 504

 Score =  237 bits (605), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 115/142 (80%), Positives = 123/142 (86%)

Query: 12  TKVGTVEADEFAALLKQSFKPRTERAATEVENAVSTLVQEALKDTSVIKSDVLDTIEEMI 71
           T V T E DEFA LLKQSFKPRTERA TEVENAVSTLVQ+AL D SVIK+DVLDTIE MI
Sbjct: 16  TGVATQEVDEFATLLKQSFKPRTERAETEVENAVSTLVQQALADQSVIKADVLDTIESMI 75

Query: 72  ARIDQKLTAQMNEILHAPEFQAIESAWRGLHYLVFNSETDANLKIRVMNVSKNELYRNLR 131
           AR+D+KLTAQMNEILHAP FQ +ES WRGLHYLVFNSETDA LKI VMNVSK+ELY+NLR
Sbjct: 76  ARLDEKLTAQMNEILHAPAFQKMESTWRGLHYLVFNSETDAQLKIHVMNVSKSELYKNLR 135

Query: 132 LYPDARWDQSPLFKQIYEYEXG 153
            YP ARWDQSPLFK+ YE E G
Sbjct: 136 NYPGARWDQSPLFKKTYEAEFG 157


>ref|YP_002498284.1| EvpB family type VI secretion protein [Methylobacterium nodulans
           ORS 2060]
 gb|ACL57981.1| type VI secretion protein, EvpB/VC_A0108 family [Methylobacterium
           nodulans ORS 2060]
          Length = 506

 Score =  236 bits (603), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 112/139 (80%), Positives = 125/139 (89%)

Query: 15  GTVEADEFAALLKQSFKPRTERAATEVENAVSTLVQEALKDTSVIKSDVLDTIEEMIARI 74
           G  +ADEF ALLKQSF+PRTERAATEVENAVSTLV +AL D S++K DVLDTIEEMIARI
Sbjct: 21  GMPDADEFKALLKQSFRPRTERAATEVENAVSTLVSQALADASLVKDDVLDTIEEMIARI 80

Query: 75  DQKLTAQMNEILHAPEFQAIESAWRGLHYLVFNSETDANLKIRVMNVSKNELYRNLRLYP 134
           D+KLTAQ+N ILHAPEFQ +ESAWRGLHYLVFNSETDA LKIRVMNVSK+EL RNL+L+P
Sbjct: 81  DEKLTAQVNAILHAPEFQKMESAWRGLHYLVFNSETDATLKIRVMNVSKSELSRNLKLFP 140

Query: 135 DARWDQSPLFKQIYEYEXG 153
            ARWDQSPLFK++YE E G
Sbjct: 141 GARWDQSPLFKKVYEAEFG 159


>ref|ZP_02907707.1| type VI secretion protein, EvpB/VC_A0108 family [Burkholderia
           ambifaria MEX-5]
 gb|EDT41166.1| type VI secretion protein, EvpB/VC_A0108 family [Burkholderia
           ambifaria MEX-5]
          Length = 498

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 80/146 (54%), Positives = 110/146 (75%)

Query: 8   KETTTKVGTVEADEFAALLKQSFKPRTERAATEVENAVSTLVQEALKDTSVIKSDVLDTI 67
           ++T      + AD+FA+LL++ FKP+T++A   +EN+V  L ++AL D  +I SDVLDT+
Sbjct: 9   EQTAGATEALGADDFASLLQKEFKPKTDKAQEAIENSVRALSEQALADAKLISSDVLDTV 68

Query: 68  EEMIARIDQKLTAQMNEILHAPEFQAIESAWRGLHYLVFNSETDANLKIRVMNVSKNELY 127
           E MIA ID+KLT Q+N+ILH  EFQ +E AWRGLHYLV N+E+D  LK+RVMNVSK +L+
Sbjct: 69  EAMIAEIDRKLTGQINQILHCEEFQKVEQAWRGLHYLVTNTESDEQLKVRVMNVSKADLH 128

Query: 128 RNLRLYPDARWDQSPLFKQIYEYEXG 153
           R L+ Y  + WDQSP+FK++YE E G
Sbjct: 129 RTLKKYKGSAWDQSPMFKKLYEEEYG 154


>ref|ZP_03270398.1| type VI secretion protein, EvpB/VC_A0108 family [Burkholderia sp.
           H160]
 gb|EDZ98017.1| type VI secretion protein, EvpB/VC_A0108 family [Burkholderia sp.
           H160]
          Length = 500

 Score =  173 bits (439), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 85/151 (56%), Positives = 112/151 (74%), Gaps = 2/151 (1%)

Query: 5   AIHKETTTKV--GTVEADEFAALLKQSFKPRTERAATEVENAVSTLVQEALKDTSVIKSD 62
           +I ++T   V     E D+F+ALL++ FKP++ERA   V NAV TL ++AL+DT VI  D
Sbjct: 5   SIQQQTGESVIEAAPELDDFSALLQREFKPKSERARDAVANAVRTLAEQALRDTGVISRD 64

Query: 63  VLDTIEEMIARIDQKLTAQMNEILHAPEFQAIESAWRGLHYLVFNSETDANLKIRVMNVS 122
           VL TIE +IA+ID+ LT Q+N ILH+  FQ +ESAWRGLHYLV N+ETD +LKIRV+N+S
Sbjct: 65  VLATIEALIAQIDEALTGQINLILHSEPFQRVESAWRGLHYLVNNTETDESLKIRVLNIS 124

Query: 123 KNELYRNLRLYPDARWDQSPLFKQIYEYEXG 153
           K EL++ L+ Y    WDQSPLFK++YE E G
Sbjct: 125 KGELHKTLKKYRGVAWDQSPLFKKLYEEEYG 155