BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0066.p (346 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770233.1| hypothetical protein bll3593 [Bradyrhizobium ja... 725 0.0 ref|YP_002498284.1| EvpB family type VI secretion protein [Methy... 604 e-171 ref|YP_002362653.1| type VI secretion protein, EvpB/VC_A0108 fam... 592 e-167 ref|ZP_01035622.1| hypothetical protein ROS217_05559 [Roseovariu... 509 e-142 ref|ZP_08863386.1| type VI secretion protein, EvpB/VC_A0108 fami... 508 e-142 >ref|NP_770233.1| hypothetical protein bll3593 [Bradyrhizobium japonicum USDA 110] dbj|BAC48858.1| bll3593 [Bradyrhizobium japonicum USDA 110] Length = 503 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/345 (99%), Positives = 345/345 (100%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD Sbjct: 159 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 218 Query: 62 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 121 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD Sbjct: 219 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 278 Query: 122 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 181 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI Sbjct: 279 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 338 Query: 182 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRLP 241 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFG+KGVDATASDNLSSRLP Sbjct: 339 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGEKGVDATASDNLSSRLP 398 Query: 242 YMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLAA 301 YMFAVSRFAHYLKCMVRDKIGSMKEKDELT+WLQTWINEYVDANPALSSEAQKARKPLAA Sbjct: 399 YMFAVSRFAHYLKCMVRDKIGSMKEKDELTIWLQTWINEYVDANPALSSEAQKARKPLAA 458 Query: 302 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPGPSS 346 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPGP+S Sbjct: 459 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPGPAS 503 >ref|YP_002498284.1| EvpB family type VI secretion protein [Methylobacterium nodulans ORS 2060] gb|ACL57981.1| type VI secretion protein, EvpB/VC_A0108 family [Methylobacterium nodulans ORS 2060] Length = 506 Score = 604 bits (1558), Expect = e-171, Method: Compositional matrix adjust. Identities = 273/343 (79%), Positives = 312/343 (90%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEPFGCLI DY+FSH+PTD+QLLRDLSKIAG+AHAPFF+GA+P L+GMDS+TEL+NPRD Sbjct: 162 GGEPFGCLIADYHFSHVPTDIQLLRDLSKIAGSAHAPFFAGADPALLGMDSFTELANPRD 221 Query: 62 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 121 +GK+F+TP+Y WK LRD D+RYLGLCMPR L RLPYGAK+EPVEEFAFEEETDGH G+ Sbjct: 222 LGKIFETPDYGPWKSLRDAPDARYLGLCMPRVLARLPYGAKTEPVEEFAFEEETDGHAGE 281 Query: 122 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 181 Y W+NAAYAMAVNINR++KE GW RIRGVQSGGEV+NLP HTFPTDDGGVDLKCPTEI Sbjct: 282 AYAWMNAAYAMAVNINRSYKENGWTVRIRGVQSGGEVVNLPNHTFPTDDGGVDLKCPTEI 341 Query: 182 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRLP 241 AISDRRE ELAKAGLIPLIHRKNTDKAAFIGAQS+Y+PK YFG+KGV+ATASDNLS+RLP Sbjct: 342 AISDRREAELAKAGLIPLIHRKNTDKAAFIGAQSVYRPKTYFGEKGVEATASDNLSARLP 401 Query: 242 YMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLAA 301 Y+FAVSRFAHYLKCMVRDKIGS KEKD+LT WLQ WIN+YVD +P SSE KARKPLA Sbjct: 402 YIFAVSRFAHYLKCMVRDKIGSTKEKDQLTKWLQEWINQYVDGDPTNSSEQTKARKPLAD 461 Query: 302 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPGP 344 A+V++ +EENPGYY+A+F+LRPH+QLE MD+G+SLVSRLP P Sbjct: 462 ARVDIFEDEENPGYYSAKFYLRPHYQLEGMDIGMSLVSRLPAP 504 >ref|YP_002362653.1| type VI secretion protein, EvpB/VC_A0108 family [Methylocella silvestris BL2] gb|ACK51291.1| type VI secretion protein, EvpB/VC_A0108 family [Methylocella silvestris BL2] Length = 504 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 281/342 (82%), Positives = 312/342 (91%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GG+P+GCLIGDY FSHLP DVQL+RDLSKIAGAAHAPFF+ A+PTLMGMDSWTEL NPRD Sbjct: 160 GGQPYGCLIGDYEFSHLPADVQLMRDLSKIAGAAHAPFFAAADPTLMGMDSWTELMNPRD 219 Query: 62 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 121 + K+FDTPEYAAWKGLRD +DS+Y+GLCMPR L R+PYGAKSEPVEEFAFEE TDGH G+ Sbjct: 220 LSKLFDTPEYAAWKGLRDAEDSKYIGLCMPRVLSRVPYGAKSEPVEEFAFEENTDGHKGE 279 Query: 122 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 181 Y W+NAAYAMAVNINRAFKE+GWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI Sbjct: 280 NYAWMNAAYAMAVNINRAFKEYGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 339 Query: 182 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRLP 241 AISDRREHELAK+GLIPLIHRKNTDKAAFIGAQS+YKPKKY G GV+ATASDNL +RLP Sbjct: 340 AISDRREHELAKSGLIPLIHRKNTDKAAFIGAQSVYKPKKYEGKNGVEATASDNLKARLP 399 Query: 242 YMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLAA 301 YMFAVSRFAHYLKCMVRDKIG+ KE +EL +WLQ WI +YVD +P SSE+ KARKPLA Sbjct: 400 YMFAVSRFAHYLKCMVRDKIGATKETEELRIWLQEWITQYVDGDPIGSSESVKARKPLAD 459 Query: 302 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPG 343 A+V++ +EENPGYY ARF+LRPH+QLEAMD+GLSLVSRLP Sbjct: 460 ARVDIFPDEENPGYYAARFYLRPHYQLEAMDIGLSLVSRLPA 501 >ref|ZP_01035622.1| hypothetical protein ROS217_05559 [Roseovarius sp. 217] gb|EAQ25787.1| hypothetical protein ROS217_05559 [Roseovarius sp. 217] Length = 497 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 230/342 (67%), Positives = 282/342 (82%), Gaps = 3/342 (0%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEPFG L+ DY+F H P DV+LL ++SKIA AAHAP +GA PTL MDSW+EL+NPRD Sbjct: 156 GGEPFGALVADYHFDHSPPDVELLGEMSKIAAAAHAPLITGANPTLFQMDSWSELANPRD 215 Query: 62 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 121 + K+F TPEYA+W+ LR+ +DS+Y+GL MPR LGRLPYGAK++PVE+FAFEE+TDG Sbjct: 216 LTKIFQTPEYASWRSLRESEDSKYVGLAMPRFLGRLPYGAKTDPVEDFAFEEDTDGSDST 275 Query: 122 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 181 KYGW+NAAY MAVNINR+FKE+GWC+RIRG++SGG + NLP+HTFPTDDGGVD KCPTEI Sbjct: 276 KYGWVNAAYGMAVNINRSFKEYGWCSRIRGIESGGALTNLPSHTFPTDDGGVDQKCPTEI 335 Query: 182 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRLP 241 AISDRRE ELAK G++PLIHRKN+D AAFIGAQSL+KP +Y D DATA+ NL++RLP Sbjct: 336 AISDRREGELAKNGMMPLIHRKNSDLAAFIGAQSLHKPAEYDDD---DATANANLAARLP 392 Query: 242 YMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLAA 301 Y+FA RFAHYLKC+VRDK+GS K +D++ WLQ WIN+YVD NP S E+ KA+ PLAA Sbjct: 393 YLFATCRFAHYLKCIVRDKVGSYKSRDDMQEWLQKWINQYVDFNPESSPESVKAQHPLAA 452 Query: 302 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPG 343 A+V + E NPGYY ++FFLRPH+QLE + V L LVS+LP Sbjct: 453 AEVVIEEVEGNPGYYTSKFFLRPHYQLEGLSVSLRLVSKLPS 494 >ref|ZP_08863386.1| type VI secretion protein, EvpB/VC_A0108 family [Ruegeria sp. TW15] Length = 498 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 228/341 (66%), Positives = 280/341 (82%), Gaps = 3/341 (0%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEP+G L+ DY+F H P D++LL ++SKIA AAHAP +GA+P+L MDSW+EL+NPRD Sbjct: 156 GGEPYGSLVADYHFDHSPQDIELLGEMSKIAAAAHAPLITGAKPSLFQMDSWSELANPRD 215 Query: 62 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 121 + K+F TPEYAAW+ LR+ +DS+Y+GL MPR LGRLPYG+K+EPVEEFAFEE+T G D Sbjct: 216 LTKIFQTPEYAAWRSLRESEDSKYVGLAMPRFLGRLPYGSKTEPVEEFAFEEDTTGANSD 275 Query: 122 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 181 Y W+NAAY MAVNINR+FKE+GWC+RIRGV+SGG V LP HTFPTDDGGVD+KCPTEI Sbjct: 276 SYSWVNAAYGMAVNINRSFKEYGWCSRIRGVESGGTVEGLPAHTFPTDDGGVDMKCPTEI 335 Query: 182 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRLP 241 AISDRRE ELAK G++PLIHRKN+D A FIGAQSL+KP +Y DATA+ NL++RLP Sbjct: 336 AISDRREAELAKNGMMPLIHRKNSDAATFIGAQSLHKPAEY---DDADATANANLAARLP 392 Query: 242 YMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLAA 301 Y+FA RFAHYLKCMVRDK+GS K + ++ WLQ WIN+YVD N +S+EA+KARKPLA+ Sbjct: 393 YLFATCRFAHYLKCMVRDKVGSFKSRQDMESWLQDWINQYVDFNADISAEAEKARKPLAS 452 Query: 302 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLP 342 A+V V E NPGYY ++FFLRPH+QLE + V L LVS+LP Sbjct: 453 AEVVVEDVEGNPGYYTSKFFLRPHYQLEGLSVSLRLVSKLP 493