BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0064.p (168 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770231.1| hypothetical protein bll3591 [Bradyrhizobium ja... 290 4e-77 ref|YP_002362655.1| type VI secretion system lysozyme-like prote... 164 4e-39 ref|YP_002498283.1| type VI secretion system lysozyme-like prote... 149 1e-34 ref|ZP_01546326.1| hypothetical protein SIAM614_12743 [Stappia a... 117 5e-25 ref|ZP_05741110.1| conserved hypothetical protein [Silicibacter ... 84 5e-15 >ref|NP_770231.1| hypothetical protein bll3591 [Bradyrhizobium japonicum USDA 110] dbj|BAC48856.1| bll3591 [Bradyrhizobium japonicum USDA 110] Length = 182 Score = 290 bits (743), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 144/168 (85%), Positives = 157/168 (93%) Query: 1 MLAFRAAHDARDARKPLELRDQFGERVIAGRRSAGRFPISETLLRREVSQDVETLLNTIA 60 MLAFR+AH+ARDARK L LRD+FGER+IAGRRSAGRFPISETLLRREVS D+ETLLNTIA Sbjct: 15 MLAFRSAHEARDARKKLNLRDEFGERIIAGRRSAGRFPISETLLRREVSHDLETLLNTIA 74 Query: 61 LESTLDLTGRGCVRASILNYGFPDIANRSIDEVTDEELSDALRMSLTTYEPRLDRKSIRV 120 LESTLDL+GR VR SILNYGFPDIA+RSIDEVTD+EL+ ALR +LTTYEPRLDRK+IRV Sbjct: 75 LESTLDLSGRDSVRTSILNYGFPDIAHRSIDEVTDDELTGALRETLTTYEPRLDRKTIRV 134 Query: 121 RRDTSVGAEQLKLRFVVHSDLKCEPLNVPVEFVADVDLDSGDIQINRL 168 RRD SVG EQLKLRF+VH+DLK EPLNVPVEFVADVDLDSGDIQINRL Sbjct: 135 RRDGSVGPEQLKLRFIVHADLKAEPLNVPVEFVADVDLDSGDIQINRL 182 >ref|YP_002362655.1| type VI secretion system lysozyme-like protein [Methylocella silvestris BL2] gb|ACK51293.1| type VI secretion system lysozyme-related protein [Methylocella silvestris BL2] Length = 182 Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 83/167 (49%), Positives = 120/167 (71%) Query: 1 MLAFRAAHDARDARKPLELRDQFGERVIAGRRSAGRFPISETLLRREVSQDVETLLNTIA 60 M AFR+A + +D+R+ +LRD G+R+IA RR+A R ISE LRREV++D+E L+N +A Sbjct: 15 MHAFRSAFEQKDSRQKQDLRDAAGDRIIAPRRAAVRATISEPNLRREVARDLEALVNAVA 74 Query: 61 LESTLDLTGRGCVRASILNYGFPDIANRSIDEVTDEELSDALRMSLTTYEPRLDRKSIRV 120 EST DL+ VR SILNYG PD+ +R+IDE + D + +L YEPRL +I+V Sbjct: 75 FESTEDLSDFDGVRKSILNYGLPDLIHRTIDEAGVNLIEDEIANALRRYEPRLVANTIKV 134 Query: 121 RRDTSVGAEQLKLRFVVHSDLKCEPLNVPVEFVADVDLDSGDIQINR 167 RD ++ ++LK+RF+V +DL C P+NVPVEF+ADV++DSGD+ + + Sbjct: 135 SRDDNLDKDELKVRFLVRADLICAPVNVPVEFIADVEIDSGDVVVKK 181 >ref|YP_002498283.1| type VI secretion system lysozyme-like protein [Methylobacterium nodulans ORS 2060] gb|ACL57980.1| type VI secretion system lysozyme-related protein [Methylobacterium nodulans ORS 2060] Length = 183 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 89/165 (53%), Positives = 112/165 (67%) Query: 3 AFRAAHDARDARKPLELRDQFGERVIAGRRSAGRFPISETLLRREVSQDVETLLNTIALE 62 AFR AH A DARKP R+ GERV+AGRRSA R I E LRR V+ DVETL+NTI L Sbjct: 17 AFRTAHAAHDARKPAPAREAGGERVVAGRRSAARAAIPEAELRRAVAGDVETLMNTIRLG 76 Query: 63 STLDLTGRGCVRASILNYGFPDIANRSIDEVTDEELSDALRMSLTTYEPRLDRKSIRVRR 122 ++LDL V S+LNYG PD+ +RSIDE L++ +R +L +EPRL SIRV R Sbjct: 77 ASLDLAAHPHVARSVLNYGLPDLVHRSIDEGAVRGLAEEIRATLEAHEPRLVPGSIRVAR 136 Query: 123 DTSVGAEQLKLRFVVHSDLKCEPLNVPVEFVADVDLDSGDIQINR 167 D + A LKLRF++ + L EPLN+PVEFVAD++ D+G I + R Sbjct: 137 DPAASAAALKLRFLITAALDAEPLNLPVEFVADLERDTGKIVLGR 181 >ref|ZP_01546326.1| hypothetical protein SIAM614_12743 [Stappia aggregata IAM 12614] gb|EAV44882.1| hypothetical protein SIAM614_12743 [Stappia aggregata IAM 12614] Length = 171 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 103/166 (62%), Gaps = 1/166 (0%) Query: 1 MLAFRAAHDA-RDARKPLELRDQFGERVIAGRRSAGRFPISETLLRREVSQDVETLLNTI 59 M AFRA D A + + Q G + +GRR + + +SE L EV +D++ LLNT+ Sbjct: 1 MWAFRALDDPDYKAAQARQKEAQGGRSLRSGRRLSRSYGVSEHTLLSEVRRDLQALLNTV 60 Query: 60 ALESTLDLTGRGCVRASILNYGFPDIANRSIDEVTDEELSDALRMSLTTYEPRLDRKSIR 119 L ST DL+ V +SI+NYG PD++ +D V L++ +R +L +EPR+D ++++ Sbjct: 61 NLNSTQDLSDFPEVESSIINYGLPDLSVHIVDTVRINRLAEDIRQALLHFEPRMDPRTLK 120 Query: 120 VRRDTSVGAEQLKLRFVVHSDLKCEPLNVPVEFVADVDLDSGDIQI 165 V RD V +E K+RF++ ++++C+P+ V EFVADVD G I+I Sbjct: 121 VERDDKVESETFKVRFLIKAEIRCDPIRVASEFVADVDPAFGRIKI 166 >ref|ZP_05741110.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] gb|EEW57911.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] Length = 197 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 3/166 (1%) Query: 4 FRAAHDARDARKPLELRDQFGERVIAGRRSAGRFPISETLLRREVSQDVETLLNTIALES 63 FRA+H+ +DA E+ ++ + R+ RF +SET LR+ + D+ LLNTI LE+ Sbjct: 30 FRASHNEKDAHHRREISGDGITKLTSARKQR-RFGVSETELRQHLEADLAALLNTIHLEA 88 Query: 64 TLDLTGRGCVRASILNYGFPDIANRSIDEVTDEELSDALRMSLTTYEPRLDRKSIRVR-R 122 L V SI+NYGF D++ + + LR SL +EPRL +S+ V+ R Sbjct: 89 ICPLDDAPHVADSIVNYGFRDLSGLGKVALNTPAVVATLRESLIRFEPRLIAESLDVQIR 148 Query: 123 DTSVGAEQLKLRFVVHSDLKCEPLNVPVEFVADVDLDSGDIQINRL 168 DTS G L V +++ +P++V ++F A++DL +G + ++ L Sbjct: 149 DTSNGKTH-HLAVFVTAEMLGDPVDVSLDFDAEIDLGAGKMSLSHL 193