BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0059.p (533 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770226.1| hypothetical protein bll3586 [Bradyrhizobium ja... 936 0.0 ref|ZP_01089500.1| hypothetical protein DSM3645_17570 [Blastopir... 325 1e-86 ref|YP_821528.1| type 12 methyltransferase [Candidatus Solibacte... 318 2e-84 ref|ZP_03131713.1| Methyltransferase type 12 [Chthoniobacter fla... 316 6e-84 ref|YP_002431043.1| type 12 methyltransferase [Desulfatibacillum... 315 2e-83 >ref|NP_770226.1| hypothetical protein bll3586 [Bradyrhizobium japonicum USDA 110] dbj|BAC48851.1| bll3586 [Bradyrhizobium japonicum USDA 110] Length = 533 Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/533 (83%), Positives = 483/533 (90%) Query: 1 VELTAMNIQTEHRQPTTGTTAYDEVYYPGHVYGLTHPNHLATIASVYGMQPAPVERCRVL 60 +EL MNIQTEHR P+TG T YDEVYYPGHVYGLTHPNHLATIA+VYGMQ APVERCRVL Sbjct: 1 MELRTMNIQTEHRHPSTGPTPYDEVYYPGHVYGLTHPNHLATIAAVYGMQAAPVERCRVL 60 Query: 61 ELGCGVGGNLLPMAFQYPDSEFIGIDLSGATIERGQRNITALGLSNIRLLHCDIMDVDAA 120 ELGCGVGGNLLPMAFQYP+SEF+G+DLSG TIERGQRNI LGLSNI+LLHCDIM+VD + Sbjct: 61 ELGCGVGGNLLPMAFQYPNSEFVGVDLSGVTIERGQRNIATLGLSNIKLLHCDIMNVDES 120 Query: 121 FGQFDYIIAHGVYSWVPPIVREKMMSIFKRNLAPKGLCYVSYNAHPFSHLRDMVRDMMRY 180 FGQFDYIIAHGVYSWVPP VREKMM IFK+N+AP+G+CYVSYNAHPFSHLRD+VRDMMRY Sbjct: 121 FGQFDYIIAHGVYSWVPPAVREKMMMIFKQNMAPRGVCYVSYNAHPFSHLRDLVRDMMRY 180 Query: 181 HTRRITGMKEKVGQARAIVKFLSEGSKSNSVHGAVMRDQCTRVLNAPDELLFHDDLDSGA 240 HTRR+T MKEKVGQARAI+KFLS+GSK+NSVHGAVMRDQ RVL +PDELLFHDDLD GA Sbjct: 181 HTRRLTDMKEKVGQARAILKFLSDGSKANSVHGAVMRDQYNRVLKSPDELLFHDDLDDGA 240 Query: 241 TAFLLHEVVEDAGRHGLQYLSDADFSRRYLAGYTEEVRATLQRFPESEFMARDQYQDFID 300 A LLHEV EDA RHGLQYLSDADFSRRYLAGY+EEVRATLQRFPESEFMARDQYQDFID Sbjct: 241 EALLLHEVAEDASRHGLQYLSDADFSRRYLAGYSEEVRATLQRFPESEFMARDQYQDFID 300 Query: 301 GNGFRRTLLCHEGISLDRKVDLDFITAFYLLSTASPRRPDACLTDDSEMEFENQDGSRIT 360 GNGFRRTLLCH+ ISL R++DLDF+T F+LLST +P PDAC+TDDS MEFENQDGSR+T Sbjct: 301 GNGFRRTLLCHDSISLSRQIDLDFVTKFHLLSTTNPVDPDACVTDDSAMEFENQDGSRVT 360 Query: 361 VTNPLLKAAHLCLGRAWPRALSFTELLYGARTLLEGRQTGDDRRILTEALYILACSGEVS 420 VTNPLLKAA+LCLGRAWPRALSF ELL GA LL GR T D ++LTEA++ILACSGEVS Sbjct: 361 VTNPLLKAAYLCLGRAWPRALSFGELLDGAGALLGGRHTDDAEKVLTEAMFILACSGEVS 420 Query: 421 FLKSRPFLVKEVTDCPQASLLARRQALSGPLVTNLLHQTVQLEDDRTRHFLQLLDGSRTI 480 FL SRPFL+KE T+ PQASLLARRQA +GPLVTNLLHQTVQLEDDRTR FLQLLDG+RTI Sbjct: 421 FLLSRPFLLKEATEYPQASLLARRQAQTGPLVTNLLHQTVQLEDDRTRDFLQLLDGARTI 480 Query: 481 EQITAEMTETFGPTIQVKQMDDAGQPTAPLLLSTRQSVDRSLASVGKLGLLVA 533 +QITAEMTE FGPTIQV Q D AG+P PLLLSTR+SV RSLA VGKLGLLVA Sbjct: 481 DQITAEMTEKFGPTIQVDQKDSAGKPADPLLLSTRESVQRSLAMVGKLGLLVA 533 >ref|ZP_01089500.1| hypothetical protein DSM3645_17570 [Blastopirellula marina DSM 3645] gb|EAQ81984.1| hypothetical protein DSM3645_17570 [Blastopirellula marina DSM 3645] Length = 540 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 182/544 (33%), Positives = 300/544 (55%), Gaps = 17/544 (3%) Query: 3 LTAMNIQTEHRQPTTGTT--AYDEVYYPGHVYGLTHPNHLATIASVYGMQPAPVERCRVL 60 +TA N+Q+ + + +YD V YP H + THP L I+ ++GM PA + +CRVL Sbjct: 1 MTAENMQSNESNESLDASKYSYDIVPYPSHPFRQTHPERLHAISRMFGMSPAEITQCRVL 60 Query: 61 ELGCGVGGNLLPMAFQYPDSEFIGIDLSGATIERGQRNITALGLSNIRLLHCDIMDVDAA 120 E+GC GGN++PMA P+S+F+GIDLS IE ++ LGL+NI L H D+MDVD + Sbjct: 61 EIGCAGGGNIIPMAETLPESQFVGIDLSQRQIESALSSVEKLGLTNIELKHLDVMDVDQS 120 Query: 121 FGQFDYIIAHGVYSWVPPIVREKMMSIFKRNLAPKGLCYVSYNAHPFSHLRDMVRDMMRY 180 G+FDYII HGV+SWVPP ++K++++ + +L P+G+ VSYN P LR +RDMM Y Sbjct: 121 LGKFDYIICHGVFSWVPPDAQDKILAVCRDHLNPQGVALVSYNTLPGWRLRGAIRDMMSY 180 Query: 181 HTRRITGMKEKVGQARAIVKFL-SEGSKSNSVHGAVMRDQCTRVLNAPDELLFHDDLDSG 239 H R ++ +K+ QARA+++FL S S +G ++ + + N D L+HD L+ Sbjct: 181 HVRNLSDPTKKIQQARALLEFLASSVSAETGAYGKMIHSELNLLKNQTDNYLYHDHLEMN 240 Query: 240 ATAFLLHEVVEDAGRHGLQYLSDADFSRRYLAGYTEEVRATLQRFPESEFMARDQYQDFI 299 F H+ +E A +H LQYL+++ + + + ++V TL+R + + R+QY DF+ Sbjct: 241 NYQFYFHQFIEQANKHNLQYLAESHIATMWTGNFAKDVAQTLERVA-PDIIQREQYADFV 299 Query: 300 DGNGFRRTLLCHEGISLDRKVDLDFITAFYLLSTASPRRPDACLT-DDSEMEFEN-QDGS 357 FR+T+LC +G LDR ++ + + ++ S D ++ + F N Q Sbjct: 300 RNRMFRQTILCAKGTKLDRALNENTLNGSWINSPMRMIEKDPAKNFPENTVSFRNLQTNQ 359 Query: 358 RITVTNPLLKAAHLCLGRAWPRALSFTELLYGARTLLEGRQTGDD-----RRILTEALYI 412 + ++PL+ A LG +P A+SF +LL AR + + G+ RR + + Sbjct: 360 GLNTSDPLMITAIEYLGDQFPLAVSFDDLL--ARVQTKAEELGNVEMSQLRRAMANNMIH 417 Query: 413 LACSGEVSFLKSRPFLVKEVTDCPQASLLARRQALSGPLVTNLLHQTVQLEDDRTRHFLQ 472 LA G V + +E++ P+ S +AR QA S +TN H+ ++L DD TRH + Sbjct: 418 LAVGGVVELSYTPNRFTREISVKPKTSGVARLQAASVDRLTNARHEIIKL-DDLTRHIVT 476 Query: 473 LLDGSRTIEQITAEMTETF--GPTIQVKQMDDAGQPTAPLLLS-TRQSVDRSLASVGKLG 529 ++DG +T +I + + G K + P +L ++V +++ + K Sbjct: 477 MIDGEKTHHEIRNGLKDMLHNGKLTMRKDGEPMPAPNGEMLEKIATEAVAKAMQRLSKAA 536 Query: 530 LLVA 533 +L++ Sbjct: 537 MLIS 540 >ref|YP_821528.1| type 12 methyltransferase [Candidatus Solibacter usitatus Ellin6076] gb|ABJ81243.1| Methyltransferase type 12 [Candidatus Solibacter usitatus Ellin6076] Length = 496 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 179/475 (37%), Positives = 259/475 (54%), Gaps = 12/475 (2%) Query: 20 TAYDEVYYPGHVYGLTHPNHLATIASVYGMQPAPVERCRVLELGCGVGGNLLPMAFQYPD 79 T YD+V YP + THP+ LA++A ++GM P PV +CRVLE+GCG GGNL+PMAF+YP Sbjct: 3 TLYDQVLYPNTPFRQTHPDRLASLAILFGMTPPPVPQCRVLEVGCGDGGNLIPMAFEYPG 62 Query: 80 SEFIGIDLSGATIERGQRNITALGLSNIRLLHCDIMDVDAAFGQFDYIIAHGVYSWVPPI 139 S+F+G+D +I G+R I LGLSNIRL D+MD G FDY+IAHG YSWVP Sbjct: 63 SQFLGVDTGAVSIGAGRREIETLGLSNIRLEQMDLMDAGTDLGTFDYVIAHGFYSWVPEP 122 Query: 140 VREKMMSIFKRNLAPKGLCYVSYNAHPFSHLRDMVRDMMRYHTRRITGMKEKVGQARAIV 199 VR+K M++ K LAP+G+ YVSYN P +R M R+MM +H R T +G AR +V Sbjct: 123 VRDKFMALTKAILAPQGVAYVSYNVLPGGRIRQMFREMMLFHLRGETEFGASIGGARQMV 182 Query: 200 KFLSEGSKSNSVHGAVMRDQCTRVLNAPDELLFHDDLDSGATAFLLHEVVEDAGRHGLQY 259 ++ S+ + + Q V++ ++LFHD+L+ E A R GLQ+ Sbjct: 183 QWF-RASQPQESESSTLIAQVESVMDRTPQVLFHDELNPDYYPVYFQEFAAHAARSGLQF 241 Query: 260 LSDADFSRRYLAGYTEEVRATLQRFPESEFMARDQYQDFIDGNGFRRTLLCHEGISLDRK 319 LS+A++ +V A +++ + + + R+QY DF+ FR+TLLCH+ I L Sbjct: 242 LSEANYFDSQPRTLPADVVAEIEKAAKGDRIVREQYFDFMRCRMFRQTLLCHQEIVLPAA 301 Query: 320 VDLDFITAFYLLSTASP--RRPDACLTDDSEMEFENQDGSRITVTNPLLKAAHLCLGRAW 377 + A ST P ++PD L+ EF G+ +T +PL KA L LG AW Sbjct: 302 PLPARLEALRASSTVKPVSKKPD--LSPGVAEEFRGWKGTGVTAAHPLTKAVMLLLGEAW 359 Query: 378 PRALSFTELLYGARTLLEGRQTGD--DRRILTEALYILACSGEVSFLKSRPFLVKEVTDC 435 P+ + ++L + R TG+ D L++ L +G + V V+ Sbjct: 360 PQTVRVSDL-----SAAVSRLTGEPADPEALSQILLSTYAAGVIDLHTQPRQCVAHVSQF 414 Query: 436 PQASLLARRQALSGPLVTNLLHQTVQLEDDRTRHFLQLLDGSRTIEQITAEMTET 490 P AS LAR Q G T LH ++ D+R F+ LLDG+R + + E+ T Sbjct: 415 PVASELARSQVSRGKCATTALHAMMEAADERICAFIGLLDGTRDLAALVRELAPT 469 >ref|ZP_03131713.1| Methyltransferase type 12 [Chthoniobacter flavus Ellin428] gb|EDY17582.1| Methyltransferase type 12 [Chthoniobacter flavus Ellin428] Length = 505 Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 176/474 (37%), Positives = 259/474 (54%), Gaps = 5/474 (1%) Query: 19 TTAYDEVYYPGHVYGLTHPNHLATIASVYGMQPAPVERCRVLELGCGVGGNLLPMAFQYP 78 T+YD YP Y THP+ LA +A++YG+ PAPVERCRVLELGCG G NL+ MA+ P Sbjct: 3 ATSYDAFPYPSSAYPRTHPDRLAVMATLYGIDPAPVERCRVLELGCGDGWNLISMAYGLP 62 Query: 79 DSEFIGIDLSGATIERGQRNITALGLSNIRLLHCDIMDVDAAFGQFDYIIAHGVYSWVPP 138 EF GIDL+ IERG LGL N+ L D+++ G+FDYIIAHG+YSWVP Sbjct: 63 GGEFTGIDLASTPIERGIAFCQELGLRNVHLRQLDLLEA-GDLGEFDYIIAHGLYSWVPE 121 Query: 139 IVREKMMSIFKRNLAPKGLCYVSYNAHPFSHLRDMVRDMMRYHTRRITGMKEKVGQARAI 198 VR K++ + R+LA G+ +SYN +P +HLR++VR MM YH +EK+ Q+RA+ Sbjct: 122 PVRRKILEVCARSLARNGVALISYNVYPGNHLRELVRGMMHYHAAHFVRPEEKIRQSRAL 181 Query: 199 VKFLSEGSKSNSVHGAVMRDQCTRVLNAPDELLFHDDLDSGATAFLLHEVVEDAGRHGLQ 258 V+FL++ + ++ ++ + R+ N D LFHDDL+ F HE + A HG Q Sbjct: 182 VRFLADSQEPRELYHHLLDQEAKRLENYSDGALFHDDLNPLNQPFYFHEFMAQAAPHGFQ 241 Query: 259 YLSDADFSRRYLAGYTEEVRATLQRFPESEFMARDQYQDFIDGNGFRRTLLCHEGISLDR 318 +L++A+ S + Y+ A L ++ +A +QY DF+ GFR TLLC + + Sbjct: 242 FLAEAEVSDNFARHYSPRAEAALAELDPNDLVAHEQYLDFLRCRGFRHTLLCRQDQPRQK 301 Query: 319 KVDLDFITAFYLLSTASPRRPDACLTDDSEMEFENQDGSRITVTNPLLKAAHLCLGRAWP 378 ++ + + + P DA + F +GS+I +P+LKAA + LG WP Sbjct: 302 EMSPERVMLLRIAGEIRPATADADPRSLTPEIFHGPEGSQIETNDPVLKAALVHLGTLWP 361 Query: 379 RALSFTELLYGARTLLEGRQTGDDRRILTEALYI----LACSGEVSFLKSRPFLVKEVTD 434 +SF++LL A T+ + R E+L L + + F R +V++ Sbjct: 362 ECISFSDLLEHAITVSGAPSDPESRSRAAESLAAELLQLLGAAFLEFRAHRLPVVRQPGA 421 Query: 435 CPQASLLARRQALSGPLVTNLLHQTVQLEDDRTRHFLQLLDGSRTIEQITAEMT 488 P+ S LAR Q VT+L TV ++D +LLDGSR + AE+ Sbjct: 422 TPRISALARLQLRVVHFVTSLRQSTVVMDDPLGHALARLLDGSRDRAMLKAELA 475 >ref|YP_002431043.1| type 12 methyltransferase [Desulfatibacillum alkenivorans AK-01] gb|ACL03575.1| Methyltransferase type 12 [Desulfatibacillum alkenivorans AK-01] Length = 530 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 164/468 (35%), Positives = 270/468 (57%), Gaps = 11/468 (2%) Query: 20 TAYDEVYYPGHVYGLTHPNHLATIASVYGMQPAPVERCRVLELGCGVGGNLLPMAFQYPD 79 T+YD+V Y + + THP LA +A+++G+ P +++CRVLE+GC GGNL+PMA+ +P+ Sbjct: 9 TSYDDVPYESNPFPQTHPQRLAALAALFGLNPPDIQKCRVLEMGCASGGNLIPMAYHFPE 68 Query: 80 SEFIGIDLSGATIERGQRNITALGLSNIRLLHCDIMDVDAAFGQFDYIIAHGVYSWVPPI 139 +EF+G+DL+ ++ G+ I LGL NIR+ + IMD+D ++G+FD++I+HGV+SWVP Sbjct: 69 AEFVGVDLALEQVKVGRNVIEDLGLKNIRIENASIMDIDESWGKFDFVISHGVFSWVPGE 128 Query: 140 VREKMMSIFKRNLAPKGLCYVSYNAHPFSHLRDMVRDMMRYHTRRITGMKEKVGQARAIV 199 V+EKMM++ NL GL Y+SYN +P H+R M+R MM YHT + KV QARA+V Sbjct: 129 VQEKMMAVCSENLTDGGLAYLSYNVYPGWHMRGMIRHMMLYHTAQFEDQPRKVQQARALV 188 Query: 200 KFLSEGSKS-NSVHGAVMRDQCTRVLNAPDELLFHDDLDSGATAFLLHEVVEDAGRHGLQ 258 FL++ + N+ +G +++ + + + D LFH+ L+ H+ E A +HG+Q Sbjct: 189 DFLAKSVPTENNYYGLLLKSEMDLLKKSKDYYLFHEHLEDRNEPMYFHQFAEMANKHGVQ 248 Query: 259 YLSDADFSRRYLAGYTEEVRATLQRFPESEFMARDQYQDFIDGNGFRRTLLCHEGISLDR 318 YL ++DFS +G+++EV TL+R ++ + +QY DF+ FR+T++C G ++R Sbjct: 249 YLGESDFSTMLTSGFSKEVSETLKRVSKN-IIQTEQYMDFVRNRMFRQTIMCKTGSPVNR 307 Query: 319 KVDLDFITAFYLLSTASPRRPDACLTDDSEMEFENQDGSRITVTNPLLKAAHLCLGRAWP 378 V D + + S+A + L+ ++ + F++ G I+++ P+ KAA L WP Sbjct: 308 NVTADRLEKYLFASSAKAQDDLTDLSAETRITFKSPKGPSISISRPITKAALFALKEVWP 367 Query: 379 RALSFTELLYGARTLL--------EGRQTGDDRRILTEALYILACSGEVSFLKSRPFLVK 430 +AL EL A+ L E + +++L + V + + V Sbjct: 368 KALGIDELTAAAKKKLVEEGIKEVEKVEEAQFKQVLLADMLQCMTISLVEYHLWQGDFVS 427 Query: 431 EVTDCPQASLLARRQALSGPLVTNLLHQTVQLEDDRTRHFLQLLDGSR 478 EV++ P+ S L A P N H+TV L D + + L DG+R Sbjct: 428 EVSEKPKVSPLGAVYAKMRPRTVNQRHETVPL-DAALMNMIPLADGTR 474