BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0058.p         (194 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770225.1| hypothetical protein blr3585 [Bradyrhizobium ja...   350   5e-95
ref|YP_002744178.1| membrane protein [Streptococcus equi subsp. ...    39   0.39 
ref|YP_002744971.1| membrane protein [Streptococcus equi subsp. ...    39   0.40 
ref|YP_002745243.1| membrane protein [Streptococcus equi subsp. ...    39   0.42 
ref|YP_002122924.1| hypothetical protein CF-7 Family [Streptococ...    39   0.50 

>ref|NP_770225.1| hypothetical protein blr3585 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48850.1| blr3585 [Bradyrhizobium japonicum USDA 110]
          Length = 216

 Score =  350 bits (899), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 176/216 (81%), Positives = 186/216 (86%), Gaps = 22/216 (10%)

Query: 1   VNSKDDPMSLRSRVLDVLNGPAVARIRFRFPIRGSHVTIAPQTFHHVARAIRLGQVSVRV 60
           +N++DD MSLRSRVLDVL+GPAVAR+RFRFPIRGSHVTIAPQTFHHVARAIRLGQV+VR 
Sbjct: 1   MNNEDDQMSLRSRVLDVLSGPAVARMRFRFPIRGSHVTIAPQTFHHVARAIRLGQVTVRP 60

Query: 61  PTDLAANVAAQYNDVARTRADGTVVAANTLEVVSATGRMDEAYIVHEALHAAYDLLRTGL 120
           PTDLAA VAAQYNDVARTRADGT VAANTLEVVSATGR+DEAYIVHE+LHAAYDLLRTGL
Sbjct: 61  PTDLAAGVAAQYNDVARTRADGTAVAANTLEVVSATGRLDEAYIVHESLHAAYDLLRTGL 120

Query: 121 DGNX----------------------WANGPIYANAAEVARTLLSQYQKGDPGIPWVGEH 158
           D N                       WANGPIYANAAEVARTLLSQYQKGDPGIPWVGEH
Sbjct: 121 DANAEEASAYVCTALYCRMTGLPRPRWANGPIYANAAEVARTLLSQYQKGDPGIPWVGEH 180

Query: 159 EWRMLRAGVGLSAVYASGPGGIVTGWLLGQQYTHDG 194
           EW+MLRAGVGL  VYASGPGGI+TGWLLGQQYTHDG
Sbjct: 181 EWKMLRAGVGLDPVYASGPGGILTGWLLGQQYTHDG 216


>ref|YP_002744178.1| membrane protein [Streptococcus equi subsp. zooepidemicus]
 emb|CAW98680.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus]
          Length = 640

 Score = 38.9 bits (89), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 35  SHVTIAPQTFHHVARAIRLGQVSVRVPTDLAANVAAQYNDVARTRADGTVVAANTL---- 90
           SH  +  Q F  +   +RL Q  ++   +L  N  A+ +D+        V  A T+    
Sbjct: 92  SHAQLPGQVFKTLQSELRLSQAHLKDQLELLQNTRAKLSDLVHYSG---VSHAKTVVDYS 148

Query: 91  EVVSATGRMDEAYIVHEALHAAYDL 115
           E+++   R+DEA I +E+ HA+ DL
Sbjct: 149 ELITDINRLDEAIIQYESNHASQDL 173


>ref|YP_002744971.1| membrane protein [Streptococcus equi subsp. zooepidemicus]
 emb|CAX00089.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus]
          Length = 640

 Score = 38.9 bits (89), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 35  SHVTIAPQTFHHVARAIRLGQVSVRVPTDLAANVAAQYNDVARTRADGTVVAANTL---- 90
           SH  +  Q F  +   +RL Q  ++   +L  N  A+ +D+        V  A T+    
Sbjct: 92  SHAQLPGQVFKTLQSELRLSQAHLKDQLELLQNTRAKLSDLVHYSG---VSHAKTVVDYS 148

Query: 91  EVVSATGRMDEAYIVHEALHAAYDL 115
           E+++   R+DEA I +E+ HA+ DL
Sbjct: 149 ELITDINRLDEAIIQYESNHASQDL 173


>ref|YP_002745243.1| membrane protein [Streptococcus equi subsp. zooepidemicus]
 emb|CAX00569.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus]
          Length = 652

 Score = 38.9 bits (89), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 35  SHVTIAPQTFHHVARAIRLGQVSVRVPTDLAANVAAQYNDVARTRADGTVVAANTL---- 90
           SH  +  Q F  +   +RL Q  ++   +L  N  A+ +D+        V  A T+    
Sbjct: 110 SHAQLPGQVFKTLQSELRLSQAHLKDQLELLQNTRAKLSDLVHYSG---VSHAKTVVDYS 166

Query: 91  EVVSATGRMDEAYIVHEALHAAYDL 115
           E+++   R+DEA I +E+ HA+ DL
Sbjct: 167 ELITDINRLDEAIIQYESNHASQDL 191


>ref|YP_002122924.1| hypothetical protein CF-7 Family [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gb|ACG61911.1| hypothetical protein CF-7 Family [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 606

 Score = 38.5 bits (88), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 35  SHVTIAPQTFHHVARAIRLGQVSVRVPTDLAANVAAQYNDVARTRADGTVVAANTL---- 90
           SH  +  Q F  +   +RL Q  ++   +L  N  A+ +D+        V  A T+    
Sbjct: 58  SHAQLPGQVFKTLQSELRLSQAHLKDQLELLQNARAKVSDLVHYSG---VSHAKTVVDYS 114

Query: 91  EVVSATGRMDEAYIVHEALHAAYDL 115
           E+++   R+DEA I +E+ HA+ DL
Sbjct: 115 ELITDINRLDEAIIQYESNHASQDL 139