BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0055.p         (281 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_05918952.1| conserved hypothetical protein [Prevotella sp...    45   0.009
ref|ZP_06422969.1| conserved hypothetical protein [Prevotella sp...    43   0.066
ref|ZP_07326732.1| hypothetical protein AceceDRAFT_2080 [Acetivi...    39   0.88 
gb|EGY41394.1| hypothetical protein H5P1_0454 [Aggregatibacter a...    39   1.3  
ref|ZP_06634483.1| hypothetical protein D7S_0253 [Aggregatibacte...    38   1.6  

>ref|ZP_05918952.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gb|EEX51618.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 603

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 28/51 (54%)

Query: 223 HRVGIGILRRIAKPSLIDQDQASMCGPSALMFSYASDKPGQYARFAIDLRR 273
             V   I++R+ KP LIDQ   S+CG + L + +A   P +Y  F ID+  
Sbjct: 280 QEVKAQIIQRMGKPWLIDQSGTSLCGMACLFYVFAKLHPVEYGEFIIDMHH 330


>ref|ZP_06422969.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gb|EFC67812.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 475

 Score = 42.7 bits (99), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 217 FPKLDPHRVGIGILRRIAKPSLIDQDQASMCGPSALMFSYASDKPGQYARFAIDLRR 273
           F   D   V   I +RIA P L+DQ+  S+CG +AL + +  + P  Y     D+  
Sbjct: 148 FRYFDFATVSDEIEKRIADPWLVDQNSTSLCGMAALFYVFIKNNPTMYKSLVTDIHH 204


>ref|ZP_07326732.1| hypothetical protein AceceDRAFT_2080 [Acetivibrio cellulolyticus
           CD2]
 gb|EFL62031.1| hypothetical protein AceceDRAFT_2080 [Acetivibrio cellulolyticus
           CD2]
          Length = 486

 Score = 38.9 bits (89), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 18/71 (25%), Positives = 39/71 (54%)

Query: 201 AAEMVCDFLKNTRTTFFPKLDPHRVGIGILRRIAKPSLIDQDQASMCGPSALMFSYASDK 260
           A +++ +F K+  +  +P +D   +   I   IA P  ++Q +A +CGP+A+++     +
Sbjct: 234 ANQLLDEFKKSGASGVWPNIDKTHLIDDISAIIANPLRVNQGRAPLCGPAAVVYELVKRE 293

Query: 261 PGQYARFAIDL 271
           P ++ +   DL
Sbjct: 294 PARFIKICRDL 304


>gb|EGY41394.1| hypothetical protein H5P1_0454 [Aggregatibacter
           actinomycetemcomitans serotype a str. H5P1]
          Length = 365

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 220 LDPHRVGIGILRRIAKPSLIDQDQASMCGPSALMFSYASDKPGQYARFA 268
            D   +   I  R+A+P   DQD+ S+CGP+A  +    D+P  Y + A
Sbjct: 165 FDKREIATQIKNRLAEP-YPDQDETSLCGPAAFYYCLLKDRPDIYDKVA 212


>ref|ZP_06634483.1| hypothetical protein D7S_0253 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gb|EFE00802.1| hypothetical protein D7S_0253 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gb|EGY36023.1| hypothetical protein I63B_1115 [Aggregatibacter
           actinomycetemcomitans serotype d str. I63B]
 gb|EGY40138.1| hypothetical protein D18P1_1672 [Aggregatibacter
           actinomycetemcomitans serotype f str. D18P1]
          Length = 401

 Score = 38.1 bits (87), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 220 LDPHRVGIGILRRIAKPSLIDQDQASMCGPSALMFSYASDKPGQYARFA 268
            D   +   I  R+A+P   DQD+ S+CGP+A  +    D+P  Y + A
Sbjct: 165 FDKREIATQIKNRLAEP-YPDQDETSLCGPAAFYYCLLKDRPDIYDKVA 212