BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0054.p (171 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06634483.1| hypothetical protein D7S_0253 [Aggregatibacte... 91 6e-17 gb|EGY41394.1| hypothetical protein H5P1_0454 [Aggregatibacter a... 78 5e-13 ref|YP_001335217.1| hypothetical protein KPN_01556 [Klebsiella p... 77 1e-12 ref|ZP_08307905.1| hypothetical protein HMPREF9538_05625 [Klebsi... 76 2e-12 ref|YP_001393348.1| hypothetical protein YpsIP31758_B0050 [Yersi... 76 2e-12 >ref|ZP_06634483.1| hypothetical protein D7S_0253 [Aggregatibacter actinomycetemcomitans D7S-1] gb|EFE00802.1| hypothetical protein D7S_0253 [Aggregatibacter actinomycetemcomitans D7S-1] gb|EGY36023.1| hypothetical protein I63B_1115 [Aggregatibacter actinomycetemcomitans serotype d str. I63B] gb|EGY40138.1| hypothetical protein D18P1_1672 [Aggregatibacter actinomycetemcomitans serotype f str. D18P1] Length = 401 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 27/167 (16%) Query: 13 VDWLTCASIRDSENWFLDFDDTGRISD-VAGITLPSEMEQWFRKAGYQDVREETNLKFSK 71 +DWLT AS+RDS N F D+D+ +SD V GITLPS + WF K G +++ + TNL FS+ Sbjct: 246 LDWLTLASLRDSSNTFRDYDE---VSDQVPGITLPSGLVDWFIKIGSKEIAKNTNLFFSR 302 Query: 72 GLDSVNEANSLLAGGYRVCLFISANMIEYDDQSDEGSVLTRHWVVLRDRIQVSN------ 125 L S+ E N LF++ +I ++ HWVVL I V+N Sbjct: 303 SLASLVELNQYYVDNSHTLLFVAHKIINGSSATNTKD----HWVVLTSSITVNNQPISIN 358 Query: 126 ----GNVTTTIFTWGKGDYAIPHPGKGGAQKPLSIGDFLMNYYGYVA 168 G V FTWG G + P+S+ +FL ++YG +A Sbjct: 359 SPLDGIVNCKFFTWG---------SIRGFRNPVSLKEFLNHFYGGLA 396 >gb|EGY41394.1| hypothetical protein H5P1_0454 [Aggregatibacter actinomycetemcomitans serotype a str. H5P1] Length = 365 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 6/120 (5%) Query: 13 VDWLTCASIRDSENWFLDFDDTGRISDVAGITLPSEMEQWFRKAGYQDVREETNLKFSKG 72 +DWLT AS+RDS N F D+D+ V GITLPS + WF K G +++ + TNL FS+ Sbjct: 246 LDWLTLASLRDSSNTFRDYDEVS--DQVPGITLPSGLVDWFIKIGSKEIAKNTNLFFSRS 303 Query: 73 LDSVNEANSLLAGGYRVCLFISANMIEYDDQSDEGSVLTRHWVVLRDRIQVSNGNVTTTI 132 L S+ E N LF++ +I ++ HWVVL I V+N ++ + Sbjct: 304 LASLVELNQYYVDNSHTLLFVAHKIINGSSATNTKD----HWVVLTSSITVNNQPISIKL 359 >ref|YP_001335217.1| hypothetical protein KPN_01556 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gb|ABR76987.1| hypothetical protein KPN_01556 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 407 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 7/131 (5%) Query: 13 VDWLTCASIRDSENWFLDFDDTGRISDVAGITLPSEMEQWFRKAGYQDVREETNLKFSKG 72 +DW+T A +RDSEN L FD S VAGIT+ + +WF KAGY+ V + G Sbjct: 262 LDWITLAGLRDSENAALSFDALD--SPVAGITMWPTLAEWFEKAGYEMVFSNVGIT-QAG 318 Query: 73 LDSVNEANSLLAGGYRVCLFISANMIEYDDQSDEGSVLTRHWVVLRDRI-QVSNGNVTTT 131 + + + N +A G++V I+ ++E S + L HWVV + Q NG V Sbjct: 319 VQGIRDLNRYVAQGFKVVTLINDGLLE---GSTNNTTLPTHWVVWDSSVTQDDNGYVNLK 375 Query: 132 IFTWGKGDYAI 142 +F+WG+ Y I Sbjct: 376 LFSWGRSTYWI 386 >ref|ZP_08307905.1| hypothetical protein HMPREF9538_05625 [Klebsiella sp. MS 92-3] gb|EGF59945.1| hypothetical protein HMPREF9538_05625 [Klebsiella sp. MS 92-3] Length = 542 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 7/131 (5%) Query: 13 VDWLTCASIRDSENWFLDFDDTGRISDVAGITLPSEMEQWFRKAGYQDVREETNLKFSKG 72 +DW+T A +RDSEN L FD S VAGIT+ + +WF KAGY+ V + G Sbjct: 262 LDWITLAGLRDSENAALSFDALD--SPVAGITMWPTLAEWFEKAGYEMVFSNVGIT-QAG 318 Query: 73 LDSVNEANSLLAGGYRVCLFISANMIEYDDQSDEGSVLTRHWVVLRDRI-QVSNGNVTTT 131 + + + N +A G++V I+ ++E S + L HWVV + Q NG V Sbjct: 319 VQGIRDLNRYVAQGFKVVTLINDGLLE---GSTNNTTLPTHWVVWDSSVTQDDNGYVNLK 375 Query: 132 IFTWGKGDYAI 142 +F+WG+ Y I Sbjct: 376 LFSWGRSTYWI 386 >ref|YP_001393348.1| hypothetical protein YpsIP31758_B0050 [Yersinia pseudotuberculosis IP 31758] gb|ABS45715.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 31758] Length = 392 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 7/126 (5%) Query: 13 VDWLTCASIRDSENWFLDFDDTGRISDVAGITLPSEMEQWFRKAGYQDVREETNLKFSKG 72 +DW+T A +RDSEN L FD S VAGIT+ + QWF KAGY+ V + G Sbjct: 245 LDWITLAGLRDSENAVLSFDALD--SPVAGITMWGTLSQWFEKAGYEKVFSNVGVT-QAG 301 Query: 73 LDSVNEANSLLAGGYRVCLFISANMIEYDDQSDEGSVLTRHWVVLRDRI-QVSNGNVTTT 131 + + + N + GY+V I+ ++E S+ + HWVV + + +NG+V Sbjct: 302 VRGIRDLNEYVKKGYKVVTLINDGLLE---GSNSNLTVPTHWVVWEGPVTEDANGHVHLE 358 Query: 132 IFTWGK 137 +F+WGK Sbjct: 359 LFSWGK 364