BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0052.p (199 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770217.1| dihydroxyacetone kinase subunit DhaK [Bradyrhiz... 285 3e-75 ref|YP_001206560.1| dihydroxyacetone kinase subunit DhaK [Bradyr... 237 9e-61 ref|YP_004139440.1| dihydroxyacetone kinase, DhaK subunit [Mesor... 230 7e-59 ref|NP_105979.1| dihydroxyacetone kinase subunit DhaK [Mesorhizo... 229 1e-58 ref|YP_004608809.1| dihydroxyacetone kinase, DhaK subunit [Mesor... 228 3e-58 >ref|NP_770217.1| dihydroxyacetone kinase subunit DhaK [Bradyrhizobium japonicum USDA 110] dbj|BAC48842.1| blr3577 [Bradyrhizobium japonicum USDA 110] Length = 338 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 142/156 (91%), Positives = 146/156 (93%) Query: 1 MKKFINAVDDVLGESLDGFAAAHADLVVLGAERKFVRRRELNSKKVALVSGGGSGHEPLH 60 MKKFIN+VD VL ESLDG AAAHADLV LG ERKFVRRRELN KKVALVSGGGSGHEPLH Sbjct: 12 MKKFINSVDGVLAESLDGLAAAHADLVALGPERKFVRRRELNPKKVALVSGGGSGHEPLH 71 Query: 61 AGCVGYGMLDAACPGQVFTSPTPDQIVEAAQAVAGDAGVLFIVKNYAGDRMNFEMAAEIA 120 AG VGYGMLDAACPGQVFTSPTPDQIVEAAQAV+G+AGVLFIVKNYAGDRMNFEMAAEIA Sbjct: 72 AGFVGYGMLDAACPGQVFTSPTPDQIVEAAQAVSGEAGVLFIVKNYAGDRMNFEMAAEIA 131 Query: 121 EGRTATIVTDDDVAVEKSTYSIGRRGVAGTLIVENI 156 EG TATIVTDDDVAVE ST+SIGRRGVAGTLIVE I Sbjct: 132 EGLTATIVTDDDVAVENSTHSIGRRGVAGTLIVEKI 167 >ref|YP_001206560.1| dihydroxyacetone kinase subunit DhaK [Bradyrhizobium sp. ORS 278] emb|CAL78341.1| PTS-dependent dihydroxyacetone kinase, dihydroxyacetone binding subunit dhaK [Bradyrhizobium sp. ORS 278] Length = 329 Score = 237 bits (604), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 116/156 (74%), Positives = 127/156 (81%) Query: 1 MKKFINAVDDVLGESLDGFAAAHADLVVLGAERKFVRRRELNSKKVALVSGGGSGHEPLH 60 MKK INAVDDVL ESL GFAA H D+V LG E KFVRR+ L KVAL+SGGGSGHEPLH Sbjct: 1 MKKLINAVDDVLTESLQGFAAIHGDIVTLGDESKFVRRKSLKPGKVALISGGGSGHEPLH 60 Query: 61 AGCVGYGMLDAACPGQVFTSPTPDQIVEAAQAVAGDAGVLFIVKNYAGDRMNFEMAAEIA 120 AG VG GMLDAACPGQVFTSPTPDQ++ AAQAV G LFIVKNY GD MNF MAAE+ Sbjct: 61 AGFVGQGMLDAACPGQVFTSPTPDQMLAAAQAVETGGGSLFIVKNYEGDVMNFAMAAEMM 120 Query: 121 EGRTATIVTDDDVAVEKSTYSIGRRGVAGTLIVENI 156 + + AT++TDDDVAVE STYS GRRGVAGTL+VE I Sbjct: 121 DAKVATVITDDDVAVETSTYSTGRRGVAGTLVVEKI 156 >ref|YP_004139440.1| dihydroxyacetone kinase, DhaK subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV09390.1| dihydroxyacetone kinase, DhaK subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 328 Score = 230 bits (587), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 116/165 (70%), Positives = 132/165 (80%), Gaps = 1/165 (0%) Query: 1 MKKFINAVDDVLGESLDGFAAAHADLVVLGAERKFVRRRELNSKKVALVSGGGSGHEPLH 60 MKKFIN+VD VL ESLDGF AAHAD++VLG E KF+RR+ L K AL+SGGGSGHEPLH Sbjct: 1 MKKFINSVDTVLTESLDGFVAAHADILVLGDEHKFIRRKTLRPGKAALISGGGSGHEPLH 60 Query: 61 AGCVGYGMLDAACPGQVFTSPTPDQIVEAAQAVAGDAGVLFIVKNYAGDRMNFEMAAEIA 120 G VG+GMLDAACPGQVFTSPTPDQ++ AA+AV AG LFIVKNY GD MNFEMAAE++ Sbjct: 61 GGFVGHGMLDAACPGQVFTSPTPDQMLAAAEAVDTGAGCLFIVKNYEGDVMNFEMAAEMS 120 Query: 121 EGRTATIVTDDDVAVEKSTYSIGRRGVAGTLIVENIXERRRSHLL 165 EG IVT+DDVAVE S+Y+ GRRGVAGTL+VE I H L Sbjct: 121 EG-VQQIVTNDDVAVENSSYTTGRRGVAGTLVVEKIVGAAAEHGL 164 >ref|NP_105979.1| dihydroxyacetone kinase subunit DhaK [Mesorhizobium loti MAFF303099] dbj|BAB51765.1| mll5289 [Mesorhizobium loti MAFF303099] Length = 328 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 114/156 (73%), Positives = 130/156 (83%), Gaps = 1/156 (0%) Query: 1 MKKFINAVDDVLGESLDGFAAAHADLVVLGAERKFVRRRELNSKKVALVSGGGSGHEPLH 60 MKKF+NAVD VL ESLDGF AAHAD++ LG E KFVRRR L KVAL+SGGGSGHEPLH Sbjct: 1 MKKFMNAVDTVLTESLDGFVAAHADILALGEEHKFVRRRALRPGKVALISGGGSGHEPLH 60 Query: 61 AGCVGYGMLDAACPGQVFTSPTPDQIVEAAQAVAGDAGVLFIVKNYAGDRMNFEMAAEIA 120 AG VG+GMLDAACPGQVFTSPTPDQ++ A QAV AG LFIVKNY GD MNF+MAAE++ Sbjct: 61 AGFVGHGMLDAACPGQVFTSPTPDQMLAATQAVDSGAGCLFIVKNYEGDVMNFDMAAEMS 120 Query: 121 EGRTATIVTDDDVAVEKSTYSIGRRGVAGTLIVENI 156 +G +VT+DDVAVE S+Y+ GRRGVAGTL+VE I Sbjct: 121 DG-VLRVVTNDDVAVENSSYTTGRRGVAGTLVVEKI 155 >ref|YP_004608809.1| dihydroxyacetone kinase, DhaK subunit [Mesorhizobium opportunistum WSM2075] gb|AEH84715.1| dihydroxyacetone kinase, DhaK subunit [Mesorhizobium opportunistum WSM2075] Length = 328 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 113/163 (69%), Positives = 131/163 (80%), Gaps = 1/163 (0%) Query: 1 MKKFINAVDDVLGESLDGFAAAHADLVVLGAERKFVRRRELNSKKVALVSGGGSGHEPLH 60 MKKF+N+VD VL ESLDGF AAHAD++ LG E KF+RRR L KVAL+SGGGSGHEPLH Sbjct: 1 MKKFMNSVDTVLTESLDGFVAAHADILTLGEEHKFIRRRTLRPGKVALISGGGSGHEPLH 60 Query: 61 AGCVGYGMLDAACPGQVFTSPTPDQIVEAAQAVAGDAGVLFIVKNYAGDRMNFEMAAEIA 120 G VG+GMLDAACPGQVFTSPTPDQ++ AAQAV AG LFIVKNY GD MNF+MAAE++ Sbjct: 61 GGFVGHGMLDAACPGQVFTSPTPDQMLAAAQAVDTGAGCLFIVKNYEGDVMNFDMAAEMS 120 Query: 121 EGRTATIVTDDDVAVEKSTYSIGRRGVAGTLIVENIXERRRSH 163 +G +VT+DDVAVE S+Y+ GRRGVAGTL+VE I H Sbjct: 121 DG-ILQVVTNDDVAVENSSYTTGRRGVAGTLVVEKIVGAAAEH 162