BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0051.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770216.1| hypothetical protein blr3576 [Bradyrhizobium ja...   229   8e-59
ref|YP_004139439.1| hypothetical protein Mesci_0216 [Mesorhizobi...   130   9e-29
ref|NP_105980.1| hypothetical protein mll5290 [Mesorhizobium lot...   127   4e-28
ref|YP_004608808.1| hypothetical protein Mesop_0219 [Mesorhizobi...   126   1e-27
ref|YP_001206561.1| hypothetical protein BRADO4610 [Bradyrhizobi...   125   2e-27

>ref|NP_770216.1| hypothetical protein blr3576 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48841.1| blr3576 [Bradyrhizobium japonicum USDA 110]
          Length = 116

 Score =  229 bits (585), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 109/116 (93%), Positives = 114/116 (98%)

Query: 25  VLESRPSGMRLRLAHAMGKNRSFVSQISNPAYPVPIPVQHLNTIFDVCHFPPQAKSAFLR 84
           +LESRPSGMRLRLAHA+GKNRSFVSQISNPAYPVPIPVQHLNTIFDVCHFPPQAK+AFLR
Sbjct: 1   MLESRPSGMRLRLAHAIGKNRSFVSQISNPAYPVPIPVQHLNTIFDVCHFPPQAKTAFLR 60

Query: 85  AYARAHPRRVGRLSEGSHERTLTLHLPDLGSAKRNAELDTLLQEFTRRLIAIMREK 140
           AYARAHPRR+GRL+EGSHERTLTLHLPDLGSAKRNAELD LLQEF RRLIAIMREK
Sbjct: 61  AYARAHPRRIGRLTEGSHERTLTLHLPDLGSAKRNAELDALLQEFARRLIAIMREK 116


>ref|YP_004139439.1| hypothetical protein Mesci_0216 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gb|ADV09389.1| hypothetical protein Mesci_0216 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 140

 Score =  130 bits (326), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 3/133 (2%)

Query: 7   DEAPEVG---AVAVYKRIFKEVLESRPSGMRLRLAHAMGKNRSFVSQISNPAYPVPIPVQ 63
           D  PE G   A+  YK I  +V++ RPSGMR RLA A+GK+RSFV+QIS+PAY +PIP +
Sbjct: 3   DRTPEPGSEEAIRAYKTILSQVIDQRPSGMRQRLADALGKHRSFVTQISSPAYSIPIPSK 62

Query: 64  HLNTIFDVCHFPPQAKSAFLRAYARAHPRRVGRLSEGSHERTLTLHLPDLGSAKRNAELD 123
           HL  IF VCHF P  +  FL AY +AHP ++   S     R ++L +PD G  K+NA LD
Sbjct: 63  HLPAIFSVCHFSPAERDQFLAAYHQAHPGKMSIASGMRKTRHVSLIVPDFGDDKQNAALD 122

Query: 124 TLLQEFTRRLIAI 136
             + +F +++ +I
Sbjct: 123 KAVNDFIQKITSI 135


>ref|NP_105980.1| hypothetical protein mll5290 [Mesorhizobium loti MAFF303099]
 dbj|BAB51766.1| mll5290 [Mesorhizobium loti MAFF303099]
          Length = 141

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/130 (48%), Positives = 86/130 (66%), Gaps = 3/130 (2%)

Query: 10  PEVG---AVAVYKRIFKEVLESRPSGMRLRLAHAMGKNRSFVSQISNPAYPVPIPVQHLN 66
           PE G   A+  YK I  +V++ RPSGMR RLA A+GK+RSFV+QIS+PAY VPIP +HL 
Sbjct: 6   PEPGSEEAIRAYKTILSQVIDQRPSGMRQRLADALGKHRSFVTQISSPAYTVPIPSKHLP 65

Query: 67  TIFDVCHFPPQAKSAFLRAYARAHPRRVGRLSEGSHERTLTLHLPDLGSAKRNAELDTLL 126
            IF VCHF P  +  FL AY +AHP ++   +     R ++L +PD G  K+NA LD  +
Sbjct: 66  AIFSVCHFSPAERDQFLAAYHQAHPGKMSIAAGMRKTRHVSLVVPDFGDDKQNAALDRAI 125

Query: 127 QEFTRRLIAI 136
            EF +++ +I
Sbjct: 126 NEFIQKITSI 135


>ref|YP_004608808.1| hypothetical protein Mesop_0219 [Mesorhizobium opportunistum
           WSM2075]
 gb|AEH84714.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 141

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/133 (45%), Positives = 86/133 (64%), Gaps = 3/133 (2%)

Query: 7   DEAPEVG---AVAVYKRIFKEVLESRPSGMRLRLAHAMGKNRSFVSQISNPAYPVPIPVQ 63
           D+ PE G   A+  YK I   V++ RPSGMR RLA A+GK+RSFV+QIS+P Y +PIP +
Sbjct: 3   DKTPEPGSEEAIRAYKTILSHVIDQRPSGMRQRLADALGKHRSFVTQISSPTYSIPIPSK 62

Query: 64  HLNTIFDVCHFPPQAKSAFLRAYARAHPRRVGRLSEGSHERTLTLHLPDLGSAKRNAELD 123
           HL  IF VCHF P  +  FL AY +AHP ++   +     R ++L +PD G  K+NA LD
Sbjct: 63  HLPAIFSVCHFSPAERDQFLAAYHQAHPGKMSVAAGMRKTRHVSLVVPDFGDDKQNAALD 122

Query: 124 TLLQEFTRRLIAI 136
             + +F +++ +I
Sbjct: 123 RAVNDFIQKITSI 135


>ref|YP_001206561.1| hypothetical protein BRADO4610 [Bradyrhizobium sp. ORS 278]
 emb|CAL78342.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 150

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/134 (47%), Positives = 82/134 (61%), Gaps = 6/134 (4%)

Query: 7   DEAPEVGAVAVYKRIFKEVLESRPSGMRLRLAHAMGKNRSFVSQISNPAYPVPIPVQHLN 66
           D +     +A YK I + V++SRPSG R RLA A+GKNRSF+SQI NPAY  PIP+QH+ 
Sbjct: 5   DSSGSASPLAEYKAILRAVIDSRPSGTRQRLAEAIGKNRSFISQIVNPAYATPIPLQHVE 64

Query: 67  TIFDVCHFPPQAKSAFLRAYARAHPRRVGRLSEGSHERT---LTLHLPDLGSAKRNAELD 123
           TIF +CHF P  + AFL AY  AHP   GRL E   +R    L + LPD G    NA  D
Sbjct: 65  TIFHICHFSPHEQQAFLTAYRAAHP---GRLDEAETQRPMRRLVVELPDFGDPALNAHAD 121

Query: 124 TLLQEFTRRLIAIM 137
            ++    R + A++
Sbjct: 122 RIITGVARGITALI 135