BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0041.p         (87 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770206.1| ABC transporter substrate-binding protein [Brad...   169   9e-41
ref|ZP_02882409.1| extracellular solute-binding protein family 1...   139   1e-31
ref|YP_003609759.1| extracellular solute-binding protein family ...   138   2e-31
ref|YP_001889355.1| family 1 extracellular solute-binding protei...   138   3e-31
ref|YP_004232411.1| family 1 extracellular solute-binding protei...   137   7e-31

>ref|NP_770206.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
 dbj|BAC48831.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 452

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 84/85 (98%), Positives = 85/85 (100%)

Query: 3   AALKAVVDAPDFPKSAAFAPQFLESMGIVKDFWAEPSYAQLLLDMQKRVHDYVVADKGTA 62
           +ALKAVVDAPDFPKSAAFAPQFLESMGIVKDFWAEPSYAQLLLDMQKRVHDYVVADKGTA
Sbjct: 368 SALKAVVDAPDFPKSAAFAPQFLESMGIVKDFWAEPSYAQLLLDMQKRVHDYVVADKGTA 427

Query: 63  QQALDLLVKDWTKVFKEQGKQVASQ 87
           QQALDLLVKDWTKVFKEQGKQVASQ
Sbjct: 428 QQALDLLVKDWTKVFKEQGKQVASQ 452


>ref|ZP_02882409.1| extracellular solute-binding protein family 1 [Burkholderia
           graminis C4D1M]
 gb|EDT11612.1| extracellular solute-binding protein family 1 [Burkholderia
           graminis C4D1M]
          Length = 442

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 74/80 (92%)

Query: 3   AALKAVVDAPDFPKSAAFAPQFLESMGIVKDFWAEPSYAQLLLDMQKRVHDYVVADKGTA 62
           +A K+VVDAPDFP SA FAP FL+SM IVKDFWAEP+YA+LLLDMQKRVHDYVVADKGTA
Sbjct: 363 SAAKSVVDAPDFPNSAPFAPAFLKSMAIVKDFWAEPAYAELLLDMQKRVHDYVVADKGTA 422

Query: 63  QQALDLLVKDWTKVFKEQGK 82
           + ALDLLVKDWTKVFK++GK
Sbjct: 423 KDALDLLVKDWTKVFKQEGK 442


>ref|YP_003609759.1| extracellular solute-binding protein family 1 [Burkholderia sp.
           CCGE1002]
 gb|ADG20248.1| extracellular solute-binding protein family 1 [Burkholderia sp.
           CCGE1002]
          Length = 443

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/81 (80%), Positives = 74/81 (91%)

Query: 3   AALKAVVDAPDFPKSAAFAPQFLESMGIVKDFWAEPSYAQLLLDMQKRVHDYVVADKGTA 62
           +A K+VVDAPDFPKSA FAP FL+SM IVKDFWAEP+YA+LLLDMQKRVHDYVVADKGT+
Sbjct: 363 SAAKSVVDAPDFPKSAPFAPTFLKSMAIVKDFWAEPAYAELLLDMQKRVHDYVVADKGTS 422

Query: 63  QQALDLLVKDWTKVFKEQGKQ 83
           ++ALDLLVKDW KVFK +GK 
Sbjct: 423 KEALDLLVKDWNKVFKAEGKN 443


>ref|YP_001889355.1| family 1 extracellular solute-binding protein [Burkholderia
           phytofirmans PsJN]
 gb|ACD19985.1| extracellular solute-binding protein family 1 [Burkholderia
           phytofirmans PsJN]
          Length = 443

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/81 (80%), Positives = 73/81 (90%)

Query: 3   AALKAVVDAPDFPKSAAFAPQFLESMGIVKDFWAEPSYAQLLLDMQKRVHDYVVADKGTA 62
           +A K+VVDAPDFPKSA FAP FL+SM IVKDFW EP+YA+LLLDMQKRVHDYVVADKGTA
Sbjct: 363 SAAKSVVDAPDFPKSAPFAPAFLKSMSIVKDFWTEPAYAELLLDMQKRVHDYVVADKGTA 422

Query: 63  QQALDLLVKDWTKVFKEQGKQ 83
           ++ALDLLVKDW KVFK +GK 
Sbjct: 423 KEALDLLVKDWNKVFKAEGKN 443


>ref|YP_004232411.1| family 1 extracellular solute-binding protein [Burkholderia sp.
           CCGE1001]
 gb|ADX59351.1| extracellular solute-binding protein family 1 [Burkholderia sp.
           CCGE1001]
          Length = 443

 Score =  137 bits (344), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 64/81 (79%), Positives = 74/81 (91%)

Query: 3   AALKAVVDAPDFPKSAAFAPQFLESMGIVKDFWAEPSYAQLLLDMQKRVHDYVVADKGTA 62
           +A K+VVDAPDFPKSA FAP FL+SM IVKDFWAEP+YA+LLLDMQKRVHDYVVADKG++
Sbjct: 363 SAAKSVVDAPDFPKSAPFAPAFLKSMSIVKDFWAEPAYAELLLDMQKRVHDYVVADKGSS 422

Query: 63  QQALDLLVKDWTKVFKEQGKQ 83
           ++ALDLLVKDW KVFK +GK 
Sbjct: 423 KEALDLLVKDWNKVFKAEGKN 443