BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0038.p         (135 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772818.1| hypothetical protein bll6178 [Bradyrhizobium ja...   135   2e-30
ref|NP_768991.1| hypothetical protein blr2351 [Bradyrhizobium ja...   124   6e-27
ref|YP_001239977.1| hypothetical protein BBta_4004 [Bradyrhizobi...   108   2e-22
ref|YP_001205583.1| hypothetical protein BRADO3578 [Bradyrhizobi...   108   3e-22
ref|ZP_08628464.1| hypothetical protein CSIRO_1539 [Bradyrhizobi...    70   8e-11

>ref|NP_772818.1| hypothetical protein bll6178 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51443.1| bll6178 [Bradyrhizobium japonicum USDA 110]
          Length = 149

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/134 (51%), Positives = 90/134 (67%), Gaps = 1/134 (0%)

Query: 1   MLKNGTYAAWFRTSLADGTGIVHVADGRLWGSDAVMLYSGTYEVDGERFSAVLTTQRHSR 60
           MLK+GTY AW++T L  GTGIVHVADG++WG D++M Y G+ +VDG+RF+A + T+RH+ 
Sbjct: 15  MLKDGTYTAWYKTPLDQGTGIVHVADGQIWGRDSLMTYHGSCKVDGDRFTATVLTKRHTD 74

Query: 61  DGTTVFGTDD-LLVRLEGIWSGAIATCTGRADAVPDLAFEVTLIPSQEVAPEPPPDLPLP 119
              TVFG DD L + +EG   G IAT T  A  VP +    TLI +++    P     LP
Sbjct: 75  GRATVFGVDDELTLDIEGHCPGKIATYTATAQQVPGMILHGTLILTEQKPAAPEQAGQLP 134

Query: 120 KFDPSKLPKLPKRS 133
            F+P KLPKLPKRS
Sbjct: 135 AFNPRKLPKLPKRS 148


>ref|NP_768991.1| hypothetical protein blr2351 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47616.1| blr2351 [Bradyrhizobium japonicum USDA 110]
          Length = 152

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 84/135 (62%)

Query: 1   MLKNGTYAAWFRTSLADGTGIVHVADGRLWGSDAVMLYSGTYEVDGERFSAVLTTQRHSR 60
           ML++G YAAWFRT    GTG+V + +GR+ GSD+   Y G+Y V+ + FSAVLT  RH+ 
Sbjct: 1   MLRDGKYAAWFRTPRGQGTGVVDLIEGRISGSDSFFTYGGSYRVNEKHFSAVLTVNRHTD 60

Query: 61  DGTTVFGTDDLLVRLEGIWSGAIATCTGRADAVPDLAFEVTLIPSQEVAPEPPPDLPLPK 120
              +VFG D++ V L G+ +G +ATC+G A   PD+ FE TLI SQE AP       + K
Sbjct: 61  GPPSVFGPDEVEVDLAGVCNGLVATCSGTAKEAPDVKFEATLIYSQEDAPAADARCAVVK 120

Query: 121 FDPSKLPKLPKRSSR 135
            +  KLPK     SR
Sbjct: 121 LNADKLPKNLDSRSR 135


>ref|YP_001239977.1| hypothetical protein BBta_4004 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36071.1| hypothetical protein BBta_4004 [Bradyrhizobium sp. BTAi1]
          Length = 132

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 81/128 (63%)

Query: 1   MLKNGTYAAWFRTSLADGTGIVHVADGRLWGSDAVMLYSGTYEVDGERFSAVLTTQRHSR 60
           M+K GTY+AWF+T    GTGIV +A G + G D V+ YSG+YE  G+RF+A++ T+RH+ 
Sbjct: 1   MIKEGTYSAWFKTPRGQGTGIVQLAAGNVRGGDGVLSYSGSYEARGDRFTAIIRTKRHAP 60

Query: 61  DGTTVFGTDDLLVRLEGIWSGAIATCTGRADAVPDLAFEVTLIPSQEVAPEPPPDLPLPK 120
              ++FG D+L + LEG       TC+GRA+  PD+ FE  L+ S      PP   P PK
Sbjct: 61  GQPSLFGPDELTLSLEGCCRTIPFTCSGRAEEAPDVPFEAFLLYSAPDDAPPPAPRPAPK 120

Query: 121 FDPSKLPK 128
           F+  +LPK
Sbjct: 121 FNLEQLPK 128


>ref|YP_001205583.1| hypothetical protein BRADO3578 [Bradyrhizobium sp. ORS 278]
 emb|CAL77357.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 132

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 7/131 (5%)

Query: 2   LKNGTYAAWFRTSLADGTGIVHVADGRLWGSDAVMLYSGTYEVDGERFSAVLTTQRHSRD 61
           +K GTY+AWF+T    GTGIV +  G + G D V+ Y G+Y+  G+RF+A++ T+RH+  
Sbjct: 1   MKEGTYSAWFKTPRGQGTGIVELVGGIVRGGDTVLSYFGSYKTQGDRFTALIKTRRHASG 60

Query: 62  GTTVFGTDDLLVRLEGIWSGAIATCTGRADAVPDLAFEVTLIPSQEVAPE----PPPDLP 117
             ++FG D+L + LEG   G   TC+GRA   PD+ FE  L+ S   AP+    PP   P
Sbjct: 61  QPSLFGPDELTLSLEGCCRGTPLTCSGRAAEAPDVPFEAILLYS---APDDVACPPAQRP 117

Query: 118 LPKFDPSKLPK 128
             KF+P + PK
Sbjct: 118 ARKFNPDQWPK 128


>ref|ZP_08628464.1| hypothetical protein CSIRO_1539 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08788.1| hypothetical protein CSIRO_1539 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 129

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 2   LKNGTYAAWFRTSLADGTGIVHVADGRLWGSDAVMLYSGTYEVDGERFSAVLTTQRHSRD 61
           L  G Y   F T      G++H  +G+L G  +   Y G+Y  +G+  +  +++ RH+RD
Sbjct: 22  LLQGLYKVEFETPRGKALGVIHAENGKLRGGSSAFAYVGSYTQNGQTVTGTVSSLRHTRD 81

Query: 62  GT--TVFGTDDLLVRLEGIWSGAIATCTGRADAVPDLAFEVTL 102
               +VFG D++ +   G   G  A C G A  VP LAF+  L
Sbjct: 82  QNLPSVFGHDEVRISFNGTVKGEFAICEGTAAEVPSLAFKAVL 124