BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0023.p (485 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002979057.1| permease for cytosine/purines uracil thiamin... 634 e-179 ref|YP_887291.1| permease, cytosine/purines, uracil, thiamine, a... 480 e-133 ref|YP_003653152.1| permease for cytosine/purines uracil thiamin... 436 e-120 ref|YP_003336331.1| hypothetical protein Sros_0564 [Streptospora... 436 e-120 ref|YP_643246.1| cytosine/purines, uracil, thiamine, allantoin p... 427 e-117 >ref|YP_002979057.1| permease for cytosine/purines uracil thiamine allantoin [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS60506.1| permease for cytosine/purines uracil thiamine allantoin [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 479 Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust. Identities = 308/459 (67%), Positives = 368/459 (80%), Gaps = 2/459 (0%) Query: 3 KQTQLPAQDEAGFDAHGIEPVPAAHRTSSSFDQFWIWTGANIAPINWVLGALGIQLGLSL 62 K + + + +D HGI PVP +HRTSS DQFWIW GAN+APINWVLGALGIQ+GLSL Sbjct: 3 KSANFTSDELSAYDVHGIAPVPVSHRTSSPLDQFWIWAGANVAPINWVLGALGIQMGLSL 62 Query: 63 LQTLAVIVVGNLFGAALFAAFCLMGHRTGVPQMVLGRLAFGRRGAYLPALAQVLMPMGWV 122 T VI +GNL GAALFA FCLMG+RTGVPQMVL RLAFGRRGAYLP Q+LM MGWV Sbjct: 63 WDTFLVIAIGNLVGAALFATFCLMGYRTGVPQMVLTRLAFGRRGAYLPTFVQLLMAMGWV 122 Query: 123 AINTWIVLDLCMAALERMGIGGGVELKYAIAVLVMLFQIAIAAWGFNAIKVFERYTMPVI 182 A NTWIVLDL +AAL+RMGIGGG+E+KYAIA+++M+ QI IAAWGFNAIK FERYTMP I Sbjct: 123 ATNTWIVLDLSVAALDRMGIGGGMEVKYAIALVIMVVQIGIAAWGFNAIKYFERYTMPAI 182 Query: 183 LLIMAVMTALAFFRVDIKWQSATVTGMPAFAAATQLMTAIGIGWGISWLTYASDYTRFTR 242 LLIM MT +A F VDI+W ++TVTG+ ++A +QLMTAIGIGWGISWL YASDYTRF++ Sbjct: 183 LLIMVAMTFMASFTVDIQWSTSTVTGIARWSAMSQLMTAIGIGWGISWLVYASDYTRFSK 242 Query: 243 PSLSAAKVFRATFLGMFLPTVWLAFLGAAIASAGAGSDPSKLIIAAFGAMALPVLLVLLH 302 P L + VF+ATFLGMF+PTVWLA LGAAIASAG GSDP++LIIAAFG MALPVLLVL+H Sbjct: 243 PGLKPSSVFKATFLGMFVPTVWLATLGAAIASAGVGSDPAQLIIAAFGVMALPVLLVLVH 302 Query: 303 GPIATNIVVIYSAALSSLALDLRRPRWVISVMSSLIASAILYAFLQSGDFAHAFDNFMVA 362 GPIATNIVVIYSAALSSLA+D+ +PRWV+S+ + S ILY F+QS DFAHAF+ FMV Sbjct: 303 GPIATNIVVIYSAALSSLAMDINKPRWVVSLACGVAGSIILYGFMQSQDFAHAFETFMVT 362 Query: 363 LIVWISPWAGVTLADFYLVRRGRIDVASLYEEPGRDR--DFNWAGLIAFAAGFAAAWAFQ 420 ++VWISPWAGVT ADF+++RRG I+V LY+ R D NW G+++ G AA+ FQ Sbjct: 363 MVVWISPWAGVTAADFFIMRRGSINVDELYKPHTTSRLGDVNWTGVLSLLVGVFAAYLFQ 422 Query: 421 MGTIKAMQGPLALATGGVDLSWLTGIGVAMASYLALHRL 459 M ++ +QGPLAL GG+DLSWL G VA +Y+ H+L Sbjct: 423 MSVVEVLQGPLALGLGGIDLSWLAGFVVAFMAYIVSHKL 461 >ref|YP_887291.1| permease, cytosine/purines, uracil, thiamine, allantoin family protein [Mycobacterium smegmatis str. MC2 155] gb|ABK74325.1| permease, cytosine/purines, uracil, thiamine, allantoin family protein [Mycobacterium smegmatis str. MC2 155] Length = 473 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 241/454 (53%), Positives = 324/454 (71%), Gaps = 5/454 (1%) Query: 8 PAQDEA-GFDAHGIEPVPAAHRTSSSFDQFWIWTGANIAPINWVLGALGIQLGLSLLQTL 66 P Q A FDAHGIEP+ R S + FWIW GANIAPINWVLGALGI LGLSL++TL Sbjct: 17 PEQSAAVPFDAHGIEPIAPTDRDCSPAELFWIWCGANIAPINWVLGALGITLGLSLVETL 76 Query: 67 AVIVVGNLFGAALFAAFCLMGHRTGVPQMVLGRLAFGRRGAYLPALAQVLMPMGWVAINT 126 V+ VGNL G A+F F ++GHRT V QMVLGR FGR GA +P L Q L+ MGWV +NT Sbjct: 77 IVVAVGNLLGCAVFGVFNVIGHRTAVNQMVLGRAPFGRMGARIPGLVQFLLTMGWVGVNT 136 Query: 127 WIVLDLCMAALERMGIGGGVELKYAIAVLVMLFQIAIAAWGFNAIKVFERYTMPVILLIM 186 W+VLDL +A G+ GG+ L+ +A +M+ Q+A+A +GF AI+ FE+YT+P ++M Sbjct: 137 WVVLDLVLAVFAEFGVTGGLWLEVVVAAGIMVIQLALALYGFYAIRSFEKYTVPATAVVM 196 Query: 187 AVMTALAFFRVDIKWQSA--TVTGMPAFAAATQLMTAIGIGWGISWLTYASDYTRFTRPS 244 AVMTALAF D++W A +T F A TQL+TAIGIGWG++W+ YASDY+RF R Sbjct: 197 AVMTALAFAATDVQWSLAGHAMTAGEKFTAVTQLLTAIGIGWGLTWIPYASDYSRFVRVG 256 Query: 245 LSAAKVFRATFLGMFLPTVWLAFLGAAIASAGAGSDPSKLIIAAFGAMALPVLLVLLHGP 304 S+ VF A+ LGM++PTVWLA +GA +ASAG GSDPS L+++ FG MA+PVLL+L+HGP Sbjct: 257 ASSRSVFWASSLGMYVPTVWLAAVGACLASAGTGSDPSALVVSTFGIMAVPVLLLLVHGP 316 Query: 305 IATNIVVIYSAALSSLALDLRRPRWVISVMSSLIASAILYAFLQSGDFAHAFDNFMVALI 364 IATNI+ +YS +L++L++ +R RW +++++ +AS +L F+Q+ FAHAFDN++V+++ Sbjct: 317 IATNILNLYSCSLAALSIGVRMTRWKVTLLAGAVASVVLAVFVQADSFAHAFDNWLVSIL 376 Query: 365 VWISPWAGVTLADFYLVRRGRIDVASLYEEPGRDRDFNWAGLIAFAAGFAAAWAFQMGTI 424 VWISPWA + L D+ ++RRG +DV SLY E +N AGL++ A G A W++Q G + Sbjct: 377 VWISPWAAIMLVDYVVLRRGALDVTSLYRE--DSARWNHAGLVSLAVGIVAGWSWQYGLV 434 Query: 425 KAMQGPLALATGGVDLSWLTGIGVAMASYLALHR 458 AMQGP+A + G D SWL+G VA Y L R Sbjct: 435 PAMQGPIATSFGNTDFSWLSGSLVAGGLYWVLRR 468 >ref|YP_003653152.1| permease for cytosine/purines uracil thiamine allantoin [Thermobispora bispora DSM 43833] gb|ADG89259.1| permease for cytosine/purines uracil thiamine allantoin [Thermobispora bispora DSM 43833] Length = 484 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 225/453 (49%), Positives = 305/453 (67%), Gaps = 4/453 (0%) Query: 12 EAGFDAHGIEPVPAAHRTSSSFDQFWIWTGANIAPINWVLGALGIQLGLSLLQTLAVIVV 71 +A AH ++PV + R S++ QFWIW GANIAPINWVLGALGI LGLSL T+ V+V+ Sbjct: 10 DAAHGAHALDPVADSQRVSTAMHQFWIWAGANIAPINWVLGALGIVLGLSLADTVLVLVI 69 Query: 72 GNLFGAALFAAFCLMGHRTGVPQMVLGRLAFGRRGAYLPALAQVLMPMGWVAINTWIVLD 131 GN+ G ++F F LMG RTGV QMVL R AFGRRGAYLPA+ Q ++ GW AINTWI+LD Sbjct: 70 GNVIGMSVFGFFVLMGQRTGVSQMVLARSAFGRRGAYLPAIIQGVISAGWCAINTWIILD 129 Query: 132 LCMAALERMGIGGGVELKYAIAVLVMLFQIAIAAWGFNAIKVFERYTMPVILLIMAVMTA 191 L +A +++GI GGVELK I ++VM Q+ IAA GF AI VFE+YT+P +L++ MT Sbjct: 130 LVLALFQQIGIRGGVELKIVIVLVVMAAQVLIAASGFRAIAVFEKYTVPATILVLIAMTV 189 Query: 192 LAFFRVDIKWQSA--TVTGMPAFAAATQLMTAIGIGWGISWLTYASDYTRFTRPSLSAAK 249 +A+ R+ + W A +TG +A + +MTAIGIGWGI+WL YASDY+RF + K Sbjct: 190 VAWTRLGVDWGYAGDGLTGSARISAMSTVMTAIGIGWGITWLAYASDYSRFVPRDMPKLK 249 Query: 250 VFRATFLGMFLPTVWLAFLGAAIASAGAGSDPSKLIIAAFGAMALPVLLVLLHGPIATNI 309 ++ A+ LG F+P +WL LGA +A+ +DP +LI+ AFGA+A+PVLL+++HGPIATNI Sbjct: 250 LYAASTLGQFVPVIWLGVLGATVATISRQADPGQLIVNAFGALAIPVLLLVIHGPIATNI 309 Query: 310 VVIYSAALSSLALDLRRPRWVISVMSSLIASAILYAFLQSGDFAHAFDNFMVALIVWISP 369 + IYS +L +L +D + R ++ + A+A + +FAHA D ++ LI+W+SP Sbjct: 310 LNIYSCSLCALTIDWKLSRKTVAYGVGVFATAFTIVLVFQDNFAHALDAWLAGLIMWVSP 369 Query: 370 WAGVTLADFYLVRRGRIDVASLYEEPGRDR--DFNWAGLIAFAAGFAAAWAFQMGTIKAM 427 WA V +Y RR RIDV +LY+ PGR R D W L++F G AA+W F G + + Sbjct: 370 WATVMAVHYYGFRRQRIDVDALYDPPGRSRLGDVRWGALVSFLCGLAASWCFAYGIPELL 429 Query: 428 QGPLALATGGVDLSWLTGIGVAMASYLALHRLF 460 QGP A G +DLSWL G VA Y L R++ Sbjct: 430 QGPGARMLGNIDLSWLAGSLVAGTLYAVLGRVW 462 >ref|YP_003336331.1| hypothetical protein Sros_0564 [Streptosporangium roseum DSM 43021] gb|ACZ83588.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 487 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 218/446 (48%), Positives = 310/446 (69%), Gaps = 3/446 (0%) Query: 16 DAHGIEPVPAAHRTSSSFDQFWIWTGANIAPINWVLGALGIQLGLSLLQTLAVIVVGNLF 75 D GI PVP R +++ QFWIW GAN+API+W++G +GI LGLSLL+T+ + V+G Sbjct: 18 DEIGIRPVPPEGRDATALQQFWIWAGANLAPISWIVGTVGIALGLSLLETILIAVIGQAV 77 Query: 76 GAALFAAFCLMGHRTGVPQMVLGRLAFGRRGAYLPALAQVLMPMGWVAINTWIVLDLCMA 135 GA +F F LMGHRTGV QMVL R FGRRGAYLPAL Q LM GW+ INT++VLDLC+ Sbjct: 78 GALIFGLFALMGHRTGVNQMVLARATFGRRGAYLPALLQTLMATGWIGINTYVVLDLCLG 137 Query: 136 ALERMGIGGGVELKYAIAVLVMLFQIAIAAWGFNAIKVFERYTMPVILLIMAVMTALAFF 195 +MG+ G +KY +AV +M+ Q+ I GF AI+ FE+YT+PV+ ++M +MT + Sbjct: 138 IAHQMGLQPGDTVKYGLAVAIMIVQVVIGVLGFYAIRTFEKYTVPVVTVVMVIMTVVVLT 197 Query: 196 RV-DIKWQSATVTGMPAFAAATQLMTAIGIGWGISWLTYASDYTRFTRPSLSAAKVFRAT 254 R+ DI W +++ G F AATQL+TA+G+GWG+ W+T+ASDY+RFTRP +S +++ A+ Sbjct: 198 RLEDISWTESSLAGGERFTAATQLLTAVGVGWGMGWITWASDYSRFTRPGVSPRRLYAAS 257 Query: 255 FLGMFLPTVWLAFLGAAIASAGAGSDPSKLIIAAFGAMALPVLLVLLHGPIATNIVVIYS 314 +G+F P WL+ LGA +A DP++++ + FG M +PVL V+LHGP+ TNIV IY+ Sbjct: 258 AMGIFAPLSWLSILGALSGTASQAGDPAEIVASLFGIMTVPVLFVILHGPVGTNIVNIYT 317 Query: 315 AALSSLALDLRRPRWVISVMSSLIASAILYAFLQSGDFAHAFDNFMVALIVWISPWAGVT 374 A+L L+LD++ R S+++ ++ L+ F++S FA F NFM ++++W+SPWAGVT Sbjct: 318 ASLGLLSLDMKLKRTTASLLTGVVGFLPLFVFIESESFAAGFTNFMSSVVIWLSPWAGVT 377 Query: 375 LADFYLVRRGRIDVASLYEEPGRDR--DFNWAGLIAFAAGFAAAWAFQMGTIKAMQGPLA 432 L D+Y++RR +++ +LY +P R D N + AF AG A+AWAFQ G I+A QGP+A Sbjct: 378 LVDWYVIRRRQVECDALYADPRTSRYGDVNMRAVSAFLAGLASAWAFQYGAIEAFQGPVA 437 Query: 433 LATGGVDLSWLTGIGVAMASYLALHR 458 A G VDLSW G+GV+ Y L R Sbjct: 438 RAMGNVDLSWAAGMGVSAVLYFLLTR 463 >ref|YP_643246.1| cytosine/purines, uracil, thiamine, allantoin permease [Rubrobacter xylanophilus DSM 9941] gb|ABG03434.1| permease for cytosine/purines, uracil, thiamine, allantoin [Rubrobacter xylanophilus DSM 9941] Length = 502 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 220/467 (47%), Positives = 303/467 (64%), Gaps = 5/467 (1%) Query: 18 HGIEPVPAAHRTSSSFDQFWIWTGANIAPINWVLGALGIQLGLSLLQTLAVIVVGNLFGA 77 + IEPVP ++ + QFWIW GANIAPINWVLGALGI LGL L +T+ + VGNL G Sbjct: 28 NSIEPVPEEYKDAKPLHQFWIWAGANIAPINWVLGALGIVLGLGLWETVLTLAVGNLLGM 87 Query: 78 ALFAAFCLMGHRTGVPQMVLGRLAFGRRGAYLPALAQVLMPMGWVAINTWIVLDLCMAAL 137 LF +F LMG RTGV QMVL R AFGRRGAYLPA+ Q+++P GW+AINTWI+LDL L Sbjct: 88 LLFGSFVLMGQRTGVTQMVLSRSAFGRRGAYLPAIFQIIIPTGWIAINTWIILDLTATLL 147 Query: 138 ERMGIGGGVELKYAIAVLVMLFQIAIAAWGFNAIKVFERYTMPVILLIMAVMTALAFFRV 197 E +GI G K + +++M Q+ +A GF AI+ FE++T+P LLI+ M+ +A+ Sbjct: 148 ELLGIPGTALTKVIVVLVIMATQVGLATLGFYAIRSFEKWTVPPTLLILVAMSVVAWTGG 207 Query: 198 DIKWQSA-TVTGMPAFAAATQLMTAIGIGWGISWLTYASDYTRFTRPSLSAAKVFRATFL 256 D+ W A G + A +Q+MTAIGIGWGI WL YASDY+RF + S ++F A+ L Sbjct: 208 DVNWSFAGEAEGAERWTAMSQVMTAIGIGWGIGWLPYASDYSRFVPRATSRKRLFWASAL 267 Query: 257 GMFLPTVWLAFLGAAIASAGAGSDPSKLIIAAFGAMALPVLLVLLHGPIATNIVVIYSAA 316 G F+P +WL LGA+IA+ G G DP +I+ FGA+A+PVL +++HGPIATNI+ +YS + Sbjct: 268 GQFVPVLWLGLLGASIATTGTGVDPGLVIVQIFGALAIPVLFLVVHGPIATNILNVYSMS 327 Query: 317 LSSLALDLRRPRWVISVMSSLIASAILYAFLQSGDFAHAFDNFMVALIVWISPWAGVTLA 376 +++LA+D++ PR V+SV+ A+ + +GD A D ++ +++ W+SPWA + Sbjct: 328 VAALAVDIKIPRHVLSVIVGFFATLFTIYLVFAGDLAKNLDAWLASVVAWVSPWAAIMFI 387 Query: 377 DFYLVRRGRIDVASLYEEPGRDR--DFNWAGLIAFAAGFAAAWAFQMGTIKAMQGPLALA 434 +Y++RR IDVA+LY+ PG R D NW + G A W+F G + +QGP A A Sbjct: 388 HYYIIRRENIDVAALYQRPGESRVGDINWGAIACLVIGLAVTWSFLYGLVPVLQGPFARA 447 Query: 435 TGGVDLSWLTGIGVAMASYLALHRLFGRPLPRSVRSPATDAASIEPA 481 G+DLSW G+ V A Y L+RL G P RS +A PA Sbjct: 448 LNGLDLSWAVGLTVTGALYYGLYRL-GLVNPGGSRS-GEEARQATPA 492