BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0006.p (386 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08861028.1| hypothetical protein RTW15_08591 [Ruegeria sp... 177 2e-42 ref|YP_003121821.1| hypothetical protein Cpin_2127 [Chitinophaga... 107 3e-21 ref|YP_001849698.1| hypothetical protein MMAR_1384 [Mycobacteriu... 102 1e-19 ref|YP_003951110.1| hypothetical protein STAUR_1479 [Stigmatella... 102 2e-19 ref|NP_856237.1| hypothetical protein Mb2591 [Mycobacterium bovi... 98 3e-18 >ref|ZP_08861028.1| hypothetical protein RTW15_08591 [Ruegeria sp. TW15] Length = 363 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 145/288 (50%), Gaps = 4/288 (1%) Query: 1 MLPKAEAAYFAIADISGYTNFLAAVELDHAQDIIADFMDTVVKALRPPFRLAKFEGDAAF 60 M+ + Y IADI+GYT +L EL+HA II ++ +V L+ P +L EGDA Sbjct: 1 MIVSVQTGYLLIADITGYTGYLTRSELEHANPIIHSLLEAIVMELKDPMKLRGLEGDAVL 60 Query: 61 VYTTAEKIDGSLLQDAIEGAYFKFRRRLRSVRQASTCECQACVAMGDLDFKFVIHHGEMV 120 Y++ G + E Y F R R++ Q +TC C AC + DLD K + HHG+ Sbjct: 61 AYSSGPFPSGETFLNICESLYRAFAERRRNIVQNTTCPCNACRNVADLDLKILAHHGKFE 120 Query: 121 KQKMGGREELAGRDVILVHRLLKNTVGEKIGGRAYALYSDAAIRAMGVDPVAQGLIAHHE 180 + +G ++++G DVILVHR+ K V E G +YAL+S+ A AMG++ L+ + Sbjct: 121 ELSIGPMKDISGADVILVHRMAKTDVKEDTGILSYALFSEDAFEAMGIE---SDLMQYSA 177 Query: 181 TIDVIGDVTLWARDLEAAW-RQEDAQTRMQVTRDDAYAILEFDIAAPRQTVWEFFTVPGQ 239 + GDV + DL AAW R + +++T +DA + AP WE T P Sbjct: 178 QFEHFGDVPMRVYDLAAAWHRYREVAGPVRITDEDAVFTTRHMLNAPPGVAWEMLTDPQL 237 Query: 240 WQKWWDADAIVEDSGKGRRGLGTKNHCMHGNHTVVEEMLDWRPTDYFT 287 +W + R +G + HC+H ++DW+P +Y T Sbjct: 238 KMRWMMLKDAYREGDASRTSVGVRLHCIHEAAHFQMLIVDWQPFEYVT 285 >ref|YP_003121821.1| hypothetical protein Cpin_2127 [Chitinophaga pinensis DSM 2588] gb|ACU59620.1| hypothetical protein Cpin_2127 [Chitinophaga pinensis DSM 2588] Length = 360 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 4/153 (2%) Query: 12 IADISGYTNFLAAVELDHAQDIIADFMDTVVKALRPPFRLAKFEGDAAFVYTTAEKIDGS 71 I DISG+T F+ +EL+H+ II ++ ++ A + F +++ EGDA Y ++ Sbjct: 9 IPDISGFTRFVNEIELEHSHHIIQQLLEVLINANQAGFEISEIEGDAILFYKFGAPLELE 68 Query: 72 LLQDAIEGAYFKFRRRLRSVRQASTCECQACVAMGDLDFKFVIHHGEMVKQKMGGREELA 131 +L +E + +F R L + Q C+C ACVA +L K + H+GE ++ +L Sbjct: 69 VLYKQVERMFCEFHRHLNAYDQRKICQCHACVAAVNLTLKVITHYGEFTTYQVKNFSKLI 128 Query: 132 GRDVILVHRLLKNTVGEKIGGRAYALYSDAAIR 164 G+DVI+ H+LLKN + E Y L +D R Sbjct: 129 GKDVIVAHQLLKNDIAE----HEYWLVTDKLFR 157 >ref|YP_001849698.1| hypothetical protein MMAR_1384 [Mycobacterium marinum M] gb|ACC39843.1| conserved hypothetical protein [Mycobacterium marinum M] Length = 244 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 4/141 (2%) Query: 8 AYFAIADISGYTNFLA--AVELDHAQDIIADFMDTVVKALRPPFRLAKFEGDAAFVYTTA 65 A AIADI GYTN++ + L HAQ +A+ ++ V+ A + +LAK EGDAAF + Sbjct: 6 AVLAIADIGGYTNYMNWNRMHLAHAQWAVAELLEAVIDAGKG-LKLAKLEGDAAFFWAPG 64 Query: 66 EKIDGSLLQDAIEGAYFKFRRRLRSVRQASTCECQACVAMGDLDFKFVIHHGEMVKQKMG 125 ++ + I F R +++ +C+C++C + DL KFV H GE+ +QK+ Sbjct: 65 GDAK-VVVCERIAAMRQAFMERRERIKKDISCDCKSCAQLDDLSLKFVAHEGEVAEQKVK 123 Query: 126 GREELAGRDVILVHRLLKNTV 146 R ELAG DVILVHR+LKN+V Sbjct: 124 RRLELAGVDVILVHRMLKNSV 144 >ref|YP_003951110.1| hypothetical protein STAUR_1479 [Stigmatella aurantiaca DW4/3-1] gb|ADO69283.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 240 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 93/182 (51%), Gaps = 13/182 (7%) Query: 6 EAAYFAIADISGYTNFLAA--VELDHAQDIIADFMDTVVKALRPPFRLAKFEGDAAFVYT 63 E A IADI GYT F+ L HAQD +A ++ V+ A +LAK EGDAAF Y Sbjct: 4 EKALLLIADIGGYTRFMKQHRFGLAHAQDTVAQLLEVVIDA-AGGLKLAKLEGDAAFFYA 62 Query: 64 TAEKIDGSLLQDA-IEGAYFKFRRRLRSVRQASTCECQACVAMGDLDFKFVIHHGEMVKQ 122 E Q A I A+ + +L R C+C C+ +G L KFVIH GE+ Q Sbjct: 63 LGEDFTAFARQAANIRRAFIAKKEQLIIDR---MCKCGGCMQVGALTLKFVIHSGEIAFQ 119 Query: 123 KMGGREELAGRDVILVHRLLKNTVGEKIGGRAYALYSDAAIRAM--GVDPVAQGLIAHHE 180 K+ ELAG DVILVHR+LKN V Y L +D ++ + G+ P A L E Sbjct: 120 KVKRYTELAGVDVILVHRMLKNEVPLA----EYVLMTDPVLQQLDPGLRPFAHALDHEFE 175 Query: 181 TI 182 I Sbjct: 176 GI 177 >ref|NP_856237.1| hypothetical protein Mb2591 [Mycobacterium bovis AF2122/97] ref|YP_978670.1| hypothetical protein BCG_2584 [Mycobacterium bovis BCG str. Pasteur 1173P2] ref|YP_002645627.1| hypothetical protein JTY_2578 [Mycobacterium bovis BCG str. Tokyo 172] emb|CAD94776.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] emb|CAL72572.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] dbj|BAH26859.1| hypothetical protein JTY_2578 [Mycobacterium bovis BCG str. Tokyo 172] emb|CCC65160.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length = 245 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 4/141 (2%) Query: 8 AYFAIADISGYTNFL--AAVELDHAQDIIADFMDTVVKALRPPFRLAKFEGDAAFVYTTA 65 A IADI GYTN++ L HAQ +A +++V+ A + +LAK EGDAAF + Sbjct: 6 AVLLIADIGGYTNYMHWNRKHLAHAQWTVAQLLESVIDAAKG-MKLAKLEGDAAFFWAPG 64 Query: 66 EKIDGSLLQDAIEGAYFKFRRRLRSVRQASTCECQACVAMGDLDFKFVIHHGEMVKQKMG 125 L+ D +FR R +++ C+C++C +L KFV H GE+ +QK+ Sbjct: 65 GNT-SVLVCDRPPQMRQRFRTRREQIKKDHPCDCKSCEQRDNLSIKFVAHEGEVAEQKVK 123 Query: 126 GREELAGRDVILVHRLLKNTV 146 ELAG DVILVHR+LKN V Sbjct: 124 RNVELAGVDVILVHRMLKNEV 144