BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0096.p (526 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206738.1| putative carbohydrate kinase [Bradyrhizobium... 791 0.0 ref|YP_001239243.1| putative carbohydrate kinase [Bradyrhizobium... 785 0.0 gb|AAQ87121.1| Xylulose kinase [Sinorhizobium fredii NGR234] 579 e-163 ref|YP_002823951.1| xylulose kinase [Sinorhizobium fredii NGR234... 579 e-163 ref|YP_004614293.1| carbohydrate kinase, FGGY [Mesorhizobium opp... 567 e-159 >ref|YP_001206738.1| putative carbohydrate kinase [Bradyrhizobium sp. ORS 278] emb|CAL78521.1| putative carbohydrate kinase (xylulose/erythritol kinase, lyx/eryA-like) [Bradyrhizobium sp. ORS 278] Length = 526 Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/526 (72%), Positives = 439/526 (83%) Query: 1 MTASASRDVIIGIDAGTSLIKAVAFTLTGEQLADVSRPNAYSSLAGGHVEQDMARTWSDT 60 M A+A+RDVI+GIDAGTS+IKAVAF G Q+ + + PN+Y++L GG VEQDMARTW+DT Sbjct: 1 MAATATRDVIVGIDAGTSVIKAVAFARDGRQIGEFAIPNSYATLPGGRVEQDMARTWTDT 60 Query: 61 VAVIRALAKSVPDLSARIAAIAVTGQGDGTWLIDDDGRPVAPALLWLDSRAGRLVEEIRG 120 VA +R L ++P+LS R+AAIAVTGQGDGTWLID DGRPVAPALLWLDSRA R VE R Sbjct: 61 VAALRGLGAALPELSGRVAAIAVTGQGDGTWLIDADGRPVAPALLWLDSRAARFVEAFRS 120 Query: 121 SEHNAILYRRTGSGLNACQQGPQLAWLQAHLPDTIARATTAFHCKDWLYFLLTGERATDP 180 E NA Y+RTGSGLNACQQGPQLAWLQAH + + RA+T FHCKDWLYF LTG RATDP Sbjct: 121 GERNAAHYQRTGSGLNACQQGPQLAWLQAHGMEMLGRASTVFHCKDWLYFKLTGVRATDP 180 Query: 181 SEATFSCGDFRRRAFDAETARLIGIADLTRLFPPVVDGAVMTHPLTAAAAIEIGLPEGVP 240 SEA+FSCGDFR+R FD E+A LIGI+ RLFP VVDG V TH LT AA E GLPEGVP Sbjct: 181 SEASFSCGDFRKRCFDRESADLIGISSSLRLFPDVVDGVVTTHRLTGMAAAETGLPEGVP 240 Query: 241 VCLGYVDVICNALGAGLYDPSPDVGCTIIGSTGMHMRLVPSADAVTLNREATGYTMPFPV 300 V LGYVDVICNALG GLYDP+PDVGCTIIGSTGMHMRL SAD V LN EATGYTMPFPV Sbjct: 241 VSLGYVDVICNALGGGLYDPNPDVGCTIIGSTGMHMRLATSADDVRLNAEATGYTMPFPV 300 Query: 301 PGHYAQMQSNMAATLNIDWMLDLACDLLAAEGVTRTRAELIRRLDDQVLRARPGEVLFHP 360 GHYAQMQS MAATLNIDW+LD+A +LA EG+ R+R +LIRRLD++VL+A+ GE+L+HP Sbjct: 301 AGHYAQMQSTMAATLNIDWLLDVARGVLAMEGIARSRNDLIRRLDERVLQAKAGELLYHP 360 Query: 361 FISDAGERGPFVAHEASAQFFGLRSRHRYGDLMRGVMEGLAFAARDCYAAMGSLPRDVRI 420 FISDAGERGPFV+HEASAQ GLR+RH Y DLMR VMEGLAFAARDCYAAMGSLP ++R+ Sbjct: 361 FISDAGERGPFVSHEASAQLIGLRTRHGYWDLMRAVMEGLAFAARDCYAAMGSLPSEIRL 420 Query: 421 TGGAAKSRALGAILGAALDCDVRICSRAEAGAAGAAMIAAVAIDAYPDMRACAERWVAPH 480 TGGAA+SRALGAILGAA+ +R+C R EAGA+GAAMIAAVA Y +M CAE WV P+ Sbjct: 421 TGGAARSRALGAILGAAVGSSIRVCRREEAGASGAAMIAAVATGLYSNMMDCAEEWVRPY 480 Query: 481 LSAPQSPDAALAKRYASIFPTYLEARLASRPVWKQLAALRAGGDHV 526 L PQ+P+ ALA+RYA +FP Y+EARLA+RPVWKQLAA RAG +HV Sbjct: 481 LDEPQAPEPALAERYARLFPAYVEARLAARPVWKQLAAQRAGANHV 526 >ref|YP_001239243.1| putative carbohydrate kinase [Bradyrhizobium sp. BTAi1] gb|ABQ35337.1| erythritol kinase (L-erythritol 4-phosphate-forming) [Bradyrhizobium sp. BTAi1] Length = 526 Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/526 (74%), Positives = 441/526 (83%) Query: 1 MTASASRDVIIGIDAGTSLIKAVAFTLTGEQLADVSRPNAYSSLAGGHVEQDMARTWSDT 60 M ++ +RDVIIGIDAGTS++KAVAFT G Q+ D + PN+Y++ GG VEQD+ RTW+DT Sbjct: 1 MASATTRDVIIGIDAGTSVVKAVAFTRDGRQIGDFAIPNSYTTAPGGRVEQDLQRTWADT 60 Query: 61 VAVIRALAKSVPDLSARIAAIAVTGQGDGTWLIDDDGRPVAPALLWLDSRAGRLVEEIRG 120 VA +R LA++VPDL+ R++AIAVTGQGDGTWLID DGRPVAPALLWLDSRAG VE R Sbjct: 61 VAALRGLAQAVPDLARRVSAIAVTGQGDGTWLIDADGRPVAPALLWLDSRAGAFVESFRA 120 Query: 121 SEHNAILYRRTGSGLNACQQGPQLAWLQAHLPDTIARATTAFHCKDWLYFLLTGERATDP 180 SE NA LYRRTGSGL+ACQQGPQLAWLQAH +ARA+T FHCKDWLYF LTG+RATDP Sbjct: 121 SERNAALYRRTGSGLSACQQGPQLAWLQAHDAQMLARASTVFHCKDWLYFKLTGQRATDP 180 Query: 181 SEATFSCGDFRRRAFDAETARLIGIADLTRLFPPVVDGAVMTHPLTAAAAIEIGLPEGVP 240 SEATFSCGDFR R FD E A LIGI+ RLFP VVDGA THPL A AA+E LPEGVP Sbjct: 181 SEATFSCGDFRTRCFDDEAASLIGISAAARLFPAVVDGAAATHPLAATAAVETELPEGVP 240 Query: 241 VCLGYVDVICNALGAGLYDPSPDVGCTIIGSTGMHMRLVPSADAVTLNREATGYTMPFPV 300 V LGYVDVICNALG GLYDPSPDVGCTIIGSTGMHMRLV ADAV LN EATGYTMPFPV Sbjct: 241 VALGYVDVICNALGGGLYDPSPDVGCTIIGSTGMHMRLVNGADAVRLNPEATGYTMPFPV 300 Query: 301 PGHYAQMQSNMAATLNIDWMLDLACDLLAAEGVTRTRAELIRRLDDQVLRARPGEVLFHP 360 PGHYAQMQS MAATLNIDW+LD+A +LA EG+ R+R +LIRRLD++VL AR GE+L+HP Sbjct: 301 PGHYAQMQSTMAATLNIDWLLDVARGVLAMEGIARSRNDLIRRLDERVLDARAGELLYHP 360 Query: 361 FISDAGERGPFVAHEASAQFFGLRSRHRYGDLMRGVMEGLAFAARDCYAAMGSLPRDVRI 420 FISDAGERGPFV+HEA+AQ GLR+RH Y DLMR VMEGLAFAARDCYAAMGSLP ++R+ Sbjct: 361 FISDAGERGPFVSHEAAAQLIGLRTRHGYWDLMRAVMEGLAFAARDCYAAMGSLPAEIRL 420 Query: 421 TGGAAKSRALGAILGAALDCDVRICSRAEAGAAGAAMIAAVAIDAYPDMRACAERWVAPH 480 TGGAA+SRALG ILGAAL VR+C R EAGA+GAAMIAAVA + Y +M CAE WV P+ Sbjct: 421 TGGAARSRALGTILGAALGSTVRVCRREEAGASGAAMIAAVATNIYSNMMDCAEDWVRPY 480 Query: 481 LSAPQSPDAALAKRYASIFPTYLEARLASRPVWKQLAALRAGGDHV 526 L Q+PDAALA RY +FPTY+EARLA+RPVWKQLAA RAG +HV Sbjct: 481 LDVAQAPDAALAARYEQMFPTYVEARLAARPVWKQLAAQRAGANHV 526 >gb|AAQ87121.1| Xylulose kinase [Sinorhizobium fredii NGR234] Length = 526 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 283/511 (55%), Positives = 352/511 (68%) Query: 7 RDVIIGIDAGTSLIKAVAFTLTGEQLADVSRPNAYSSLAGGHVEQDMARTWSDTVAVIRA 66 RDV+IGIDAGTS+IK+VAF L G QLA + PN+Y ++ QD++RTW+DTV + Sbjct: 3 RDVLIGIDAGTSVIKSVAFDLGGRQLAIAAVPNSYEAVGRTGSVQDLSRTWADTVKTLVE 62 Query: 67 LAKSVPDLSARIAAIAVTGQGDGTWLIDDDGRPVAPALLWLDSRAGRLVEEIRGSEHNAI 126 L+ V +L R+AAIAVTGQGDGTW+ID DG PV LWLD+RA VE +RG + Sbjct: 63 LSAGVENLPGRVAAIAVTGQGDGTWMIDGDGEPVGKGWLWLDARASETVERLRGDSGDVE 122 Query: 127 LYRRTGSGLNACQQGPQLAWLQAHLPDTIARATTAFHCKDWLYFLLTGERATDPSEATFS 186 + RTGSGL ACQQGPQL W+ H P+ +A A TAFHCKDWLYF LTG+RATDPSEA F+ Sbjct: 123 RFARTGSGLAACQQGPQLRWMMDHAPEMLAGAATAFHCKDWLYFNLTGQRATDPSEANFT 182 Query: 187 CGDFRRRAFDAETARLIGIADLTRLFPPVVDGAVMTHPLTAAAAIEIGLPEGVPVCLGYV 246 G+FR R + E +G+ L L P +VDGA H L+ AA GLP G+PV LGYV Sbjct: 183 FGNFRDRQYSDEVISFLGLEKLRHLLPEIVDGATSHHALSKAAGSATGLPAGIPVVLGYV 242 Query: 247 DVICNALGAGLYDPSPDVGCTIIGSTGMHMRLVPSADAVTLNREATGYTMPFPVPGHYAQ 306 DV+C ALGAGLYDP D GC+IIGSTGMHMRL SA+ V LNR+ TGYTM P+P + Q Sbjct: 243 DVVCTALGAGLYDPGTDAGCSIIGSTGMHMRLATSAEDVRLNRDLTGYTMCMPIPDTFTQ 302 Query: 307 MQSNMAATLNIDWMLDLACDLLAAEGVTRTRAELIRRLDDQVLRARPGEVLFHPFISDAG 366 MQSNMAATLNIDW+L +A +L GV +++ EL+ +D + A+ +LF P+IS+AG Sbjct: 303 MQSNMAATLNIDWILSIAGGVLKGMGVEKSKGELLAHVDGWLQEAKGTPLLFEPYISEAG 362 Query: 367 ERGPFVAHEASAQFFGLRSRHRYGDLMRGVMEGLAFAARDCYAAMGSLPRDVRITGGAAK 426 ERGPFV A A F GL S H +GD++R V +GLA AARDCYA MG LP +R+TGGAA+ Sbjct: 363 ERGPFVDASARASFVGLSSTHGFGDMLRAVFDGLALAARDCYAEMGPLPERIRLTGGAAR 422 Query: 427 SRALGAILGAALDCDVRICSRAEAGAAGAAMIAAVAIDAYPDMRACAERWVAPHLSAPQS 486 S +L ILG AL ++ R EAGAAG AMIAAV++ YP M C WV PH + Sbjct: 423 SASLRRILGGALGASIQTSEREEAGAAGVAMIAAVSLGIYPSMADCVADWVRPHQRPAEP 482 Query: 487 PDAALAKRYASIFPTYLEARLASRPVWKQLA 517 D L +RY ++FP Y ++RLA RPVW L+ Sbjct: 483 ADEELVRRYDALFPAYQQSRLALRPVWHALS 513 >ref|YP_002823951.1| xylulose kinase [Sinorhizobium fredii NGR234] gb|ACP23198.1| xylulose kinase [Sinorhizobium fredii NGR234] Length = 525 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 283/511 (55%), Positives = 352/511 (68%) Query: 7 RDVIIGIDAGTSLIKAVAFTLTGEQLADVSRPNAYSSLAGGHVEQDMARTWSDTVAVIRA 66 RDV+IGIDAGTS+IK+VAF L G QLA + PN+Y ++ QD++RTW+DTV + Sbjct: 2 RDVLIGIDAGTSVIKSVAFDLGGRQLAIAAVPNSYEAVGRTGSVQDLSRTWADTVKTLVE 61 Query: 67 LAKSVPDLSARIAAIAVTGQGDGTWLIDDDGRPVAPALLWLDSRAGRLVEEIRGSEHNAI 126 L+ V +L R+AAIAVTGQGDGTW+ID DG PV LWLD+RA VE +RG + Sbjct: 62 LSAGVENLPGRVAAIAVTGQGDGTWMIDGDGEPVGKGWLWLDARASETVERLRGDSGDVE 121 Query: 127 LYRRTGSGLNACQQGPQLAWLQAHLPDTIARATTAFHCKDWLYFLLTGERATDPSEATFS 186 + RTGSGL ACQQGPQL W+ H P+ +A A TAFHCKDWLYF LTG+RATDPSEA F+ Sbjct: 122 RFARTGSGLAACQQGPQLRWMMDHAPEMLAGAATAFHCKDWLYFNLTGQRATDPSEANFT 181 Query: 187 CGDFRRRAFDAETARLIGIADLTRLFPPVVDGAVMTHPLTAAAAIEIGLPEGVPVCLGYV 246 G+FR R + E +G+ L L P +VDGA H L+ AA GLP G+PV LGYV Sbjct: 182 FGNFRDRQYSDEVISFLGLEKLRHLLPEIVDGATSHHALSKAAGSATGLPAGIPVVLGYV 241 Query: 247 DVICNALGAGLYDPSPDVGCTIIGSTGMHMRLVPSADAVTLNREATGYTMPFPVPGHYAQ 306 DV+C ALGAGLYDP D GC+IIGSTGMHMRL SA+ V LNR+ TGYTM P+P + Q Sbjct: 242 DVVCTALGAGLYDPGTDAGCSIIGSTGMHMRLATSAEDVRLNRDLTGYTMCMPIPDTFTQ 301 Query: 307 MQSNMAATLNIDWMLDLACDLLAAEGVTRTRAELIRRLDDQVLRARPGEVLFHPFISDAG 366 MQSNMAATLNIDW+L +A +L GV +++ EL+ +D + A+ +LF P+IS+AG Sbjct: 302 MQSNMAATLNIDWILSIAGGVLKGMGVEKSKGELLAHVDGWLQEAKGTPLLFEPYISEAG 361 Query: 367 ERGPFVAHEASAQFFGLRSRHRYGDLMRGVMEGLAFAARDCYAAMGSLPRDVRITGGAAK 426 ERGPFV A A F GL S H +GD++R V +GLA AARDCYA MG LP +R+TGGAA+ Sbjct: 362 ERGPFVDASARASFVGLSSTHGFGDMLRAVFDGLALAARDCYAEMGPLPERIRLTGGAAR 421 Query: 427 SRALGAILGAALDCDVRICSRAEAGAAGAAMIAAVAIDAYPDMRACAERWVAPHLSAPQS 486 S +L ILG AL ++ R EAGAAG AMIAAV++ YP M C WV PH + Sbjct: 422 SASLRRILGGALGASIQTSEREEAGAAGVAMIAAVSLGIYPSMADCVADWVRPHQRPAEP 481 Query: 487 PDAALAKRYASIFPTYLEARLASRPVWKQLA 517 D L +RY ++FP Y ++RLA RPVW L+ Sbjct: 482 ADEELVRRYDALFPAYQQSRLALRPVWHALS 512 >ref|YP_004614293.1| carbohydrate kinase, FGGY [Mesorhizobium opportunistum WSM2075] gb|AEH90199.1| Carbohydrate kinase, FGGY [Mesorhizobium opportunistum WSM2075] Length = 517 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 292/514 (56%), Positives = 364/514 (70%) Query: 8 DVIIGIDAGTSLIKAVAFTLTGEQLADVSRPNAYSSLAGGHVEQDMARTWSDTVAVIRAL 67 DV+IGIDAGTS+IK++AF G Q+A + PN Y +L GG EQD+ARTWSD +R L Sbjct: 3 DVLIGIDAGTSIIKSIAFDTAGRQIAAAALPNHYETLPGGGAEQDLARTWSDAATTLRQL 62 Query: 68 AKSVPDLSARIAAIAVTGQGDGTWLIDDDGRPVAPALLWLDSRAGRLVEEIRGSEHNAIL 127 A VPDL++R AIAVTGQGDGTWLID G PVA LWLD+RA +VEEIR + + Sbjct: 63 ADKVPDLASRTVAIAVTGQGDGTWLIDGKGEPVAKGWLWLDARAAAIVEEIRARPQDRLR 122 Query: 128 YRRTGSGLNACQQGPQLAWLQAHLPDTIARATTAFHCKDWLYFLLTGERATDPSEATFSC 187 + +TGSGL ACQQG Q +++ ++P+ + +A TAFHCKDWLYF LTGERATDPSE TF+ Sbjct: 123 FEKTGSGLAACQQGSQFVFMKRNMPEMLGKAATAFHCKDWLYFKLTGERATDPSEGTFTF 182 Query: 188 GDFRRRAFDAETARLIGIADLTRLFPPVVDGAVMTHPLTAAAAIEIGLPEGVPVCLGYVD 247 GDF R + E ++G+ DL L PP+VDG + L+ AAA G+ G PV LGYVD Sbjct: 183 GDFHTRDYSDEVLDVLGVTDLRHLLPPIVDGTRHSTGLSQAAADATGMLAGTPVVLGYVD 242 Query: 248 VICNALGAGLYDPSPDVGCTIIGSTGMHMRLVPSADAVTLNREATGYTMPFPVPGHYAQM 307 V+C ALGAGL D GC+IIGSTGMHMRL + D V LN ATGYTM P PG +AQM Sbjct: 243 VVCTALGAGLLDRERKPGCSIIGSTGMHMRLAETPDDVQLNEAATGYTMAMPAPGVFAQM 302 Query: 308 QSNMAATLNIDWMLDLACDLLAAEGVTRTRAELIRRLDDQVLRARPGEVLFHPFISDAGE 367 QSNMAATLNIDW+L LA +LA++G+TR+ E+I +D + ++P +L+ P++S+AGE Sbjct: 303 QSNMAATLNIDWVLGLASGILASQGITRSNGEMIALVDAWIAASQPASLLYQPYVSEAGE 362 Query: 368 RGPFVAHEASAQFFGLRSRHRYGDLMRGVMEGLAFAARDCYAAMGSLPRDVRITGGAAKS 427 RGPFV A A F G+ SRH Y DL+R V EGLAFAARDCYAAMG LPR+VR+TGGAA+S Sbjct: 363 RGPFVDANARAGFVGISSRHGYADLVRAVFEGLAFAARDCYAAMGPLPREVRLTGGAARS 422 Query: 428 RALGAILGAALDCDVRICSRAEAGAAGAAMIAAVAIDAYPDMRACAERWVAPHLSAPQSP 487 AL ILGAAL D+R +R EAGAAGAAMIAAV + YP M AC WV P L + Sbjct: 423 PALRKILGAALGADIRTSAREEAGAAGAAMIAAVGVGLYPSMDACVGEWVTPLLGDAEPS 482 Query: 488 DAALAKRYASIFPTYLEARLASRPVWKQLAALRA 521 D +LA Y + P+Y+ A A RPVW+ +A+++A Sbjct: 483 DRSLAAIYDKMTPSYMLAHQALRPVWRAMASVQA 516