BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0093.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239240.1| putative sugar ABC transporter permease [Bra... 516 e-144 ref|YP_001206741.1| putative sugar ABC transporter permease [Bra... 509 e-142 ref|NP_386344.1| ABC transporter permease [Sinorhizobium melilot... 432 e-119 ref|YP_001327830.1| binding-protein-dependent transport systems ... 432 e-119 ref|YP_004614296.1| binding-protein-dependent transport systems ... 432 e-119 >ref|YP_001239240.1| putative sugar ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ35334.1| carbohydrate ABC transporter membrane protein 2, CUT1 family [Bradyrhizobium sp. BTAi1] Length = 285 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 269/285 (94%), Positives = 280/285 (98%) Query: 1 MEHPSLAGRIFRGVALTLILIFFMFPIVWIFLMSFQTNEQILRIPPRILFEPTLANYEAL 60 M+H SLAGRIFRG+AL ++L+FFMFPIVWI LMSFQTNEQILRIPPRILFEPTLANYEAL Sbjct: 1 MDHSSLAGRIFRGIALAMVLVFFMFPIVWILLMSFQTNEQILRIPPRILFEPTLANYEAL 60 Query: 61 ISGQLRTAAGNLQISFMRNLFNSVVLSSAAVLLALLLGVPAAYAFARFRFRLGESIAFTL 120 ISGQLRTAAGNLQISFMRNL NS +LSSA+V+LALLLGVPAAYAFARF+FRLGE+IAFTL Sbjct: 61 ISGQLRTAAGNLQISFMRNLMNSFLLSSASVILALLLGVPAAYAFARFKFRLGETIAFTL 120 Query: 121 LSFRFAPPLLVLLPLSLYYQELGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH 180 LSFRFAPPLLVLLPLSLYYQ+LGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH Sbjct: 121 LSFRFAPPLLVLLPLSLYYQQLGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH 180 Query: 181 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA 240 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA Sbjct: 181 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA 240 Query: 241 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG 285 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG Sbjct: 241 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG 285 >ref|YP_001206741.1| putative sugar ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL78524.1| putative sugar ABC transporter, permease protein [Bradyrhizobium sp. ORS 278] Length = 285 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 266/285 (93%), Positives = 277/285 (97%) Query: 1 MEHPSLAGRIFRGVALTLILIFFMFPIVWIFLMSFQTNEQILRIPPRILFEPTLANYEAL 60 M+H S AGRIFRG+AL L+L+FFMFPIVWI LMSFQTNEQILRIPPR+LFEPT ANYEAL Sbjct: 1 MDHSSPAGRIFRGIALALVLVFFMFPIVWILLMSFQTNEQILRIPPRLLFEPTFANYEAL 60 Query: 61 ISGQLRTAAGNLQISFMRNLFNSVVLSSAAVLLALLLGVPAAYAFARFRFRLGESIAFTL 120 ISGQLRTAAGNLQI FMRNL NS VLSSA+V+LALLLGVPAAYAFARF+F+LGE+IAFTL Sbjct: 61 ISGQLRTAAGNLQIEFMRNLMNSFVLSSASVILALLLGVPAAYAFARFKFKLGETIAFTL 120 Query: 121 LSFRFAPPLLVLLPLSLYYQELGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH 180 LSFRFAPPLLVLLPLSLYYQ+LGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH Sbjct: 121 LSFRFAPPLLVLLPLSLYYQQLGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH 180 Query: 181 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA 240 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA Sbjct: 181 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA 240 Query: 241 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG 285 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG Sbjct: 241 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG 285 >ref|NP_386344.1| ABC transporter permease [Sinorhizobium meliloti 1021] ref|YP_004549552.1| ABC transporter integral membrane subunit [Sinorhizobium meliloti AK83] emb|CAC46817.1| Putative polyol ABC transporter, permease component [Sinorhizobium meliloti 1021] gb|AEG04967.1| ABC-type transporter, integral membrane subunit [Sinorhizobium meliloti BL225C] gb|AEG53938.1| ABC-type transporter, integral membrane subunit [Sinorhizobium meliloti AK83] gb|AEH78298.1| ABC transporter, permease [Sinorhizobium meliloti SM11] Length = 285 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 225/285 (78%), Positives = 255/285 (89%) Query: 1 MEHPSLAGRIFRGVALTLILIFFMFPIVWIFLMSFQTNEQILRIPPRILFEPTLANYEAL 60 ME S R+ RGVALTL+++FFMFPIVWIFLMSFQTNE ILRIPP ++F PTL NY AL Sbjct: 1 METTSPVERLLRGVALTLVVVFFMFPIVWIFLMSFQTNETILRIPPSVVFTPTLENYAAL 60 Query: 61 ISGQLRTAAGNLQISFMRNLFNSVVLSSAAVLLALLLGVPAAYAFARFRFRLGESIAFTL 120 I+G+L+TA+G L I+FMRNL NSV+LS A+V LAL+LGVPAAYAFAR +FR E IAFTL Sbjct: 61 ITGKLQTASGTLDIAFMRNLGNSVLLSVASVALALVLGVPAAYAFARHKFRGSEDIAFTL 120 Query: 121 LSFRFAPPLLVLLPLSLYYQELGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH 180 LSFRFAPPLLVLLPL+ Y+Q LGL++TYFG++W+YQLI LPLILWIVRGYFEDIS D+E+ Sbjct: 121 LSFRFAPPLLVLLPLTQYFQWLGLSNTYFGLIWIYQLICLPLILWIVRGYFEDISADVEY 180 Query: 181 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA 240 AYR+AGHSW F +IA+PLAGPGIAAAGLL+FIF WNNFVFAL+LASADKQPVTVGALA Sbjct: 181 AYRIAGHSWFSTFRKIALPLAGPGIAAAGLLAFIFAWNNFVFALVLASADKQPVTVGALA 240 Query: 241 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG 285 FVTASGIQYGQIAAAIVLS+TPTL LALYAQRYLVEGLSLGAVKG Sbjct: 241 FVTASGIQYGQIAAAIVLSITPTLALALYAQRYLVEGLSLGAVKG 285 >ref|YP_001327830.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gb|ABR60995.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 285 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 224/285 (78%), Positives = 255/285 (89%) Query: 1 MEHPSLAGRIFRGVALTLILIFFMFPIVWIFLMSFQTNEQILRIPPRILFEPTLANYEAL 60 ME S R+ RGVALTL+++FFMFPIVWIFLMSFQTNE ILRIPP ++F PTL NY AL Sbjct: 1 METTSPVERLLRGVALTLVVVFFMFPIVWIFLMSFQTNETILRIPPSVVFSPTLENYAAL 60 Query: 61 ISGQLRTAAGNLQISFMRNLFNSVVLSSAAVLLALLLGVPAAYAFARFRFRLGESIAFTL 120 I+G+L+TA+G L I+FMRNL NSV+LS A+V +ALLLGVPAAYAFAR +F+ E IAFTL Sbjct: 61 ITGKLQTASGTLDIAFMRNLGNSVLLSVASVAVALLLGVPAAYAFARHKFKGSEDIAFTL 120 Query: 121 LSFRFAPPLLVLLPLSLYYQELGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH 180 LSFRFAPPLLVLLPL+ Y+Q LGL++TYFG++W+YQLI LPLILWIVRGYFEDIS D+E+ Sbjct: 121 LSFRFAPPLLVLLPLTQYFQWLGLSNTYFGLIWIYQLICLPLILWIVRGYFEDISADVEY 180 Query: 181 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA 240 AYR+AGHSW F +IA+PLAGPGIAAAGLL+FIF WNNFVFAL+LASADKQPVTVGALA Sbjct: 181 AYRIAGHSWFSTFRKIALPLAGPGIAAAGLLAFIFAWNNFVFALVLASADKQPVTVGALA 240 Query: 241 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG 285 FVTASGIQYGQIAAAIVLS+TPTL LALYAQRYLVEGLSLGAVKG Sbjct: 241 FVTASGIQYGQIAAAIVLSITPTLALALYAQRYLVEGLSLGAVKG 285 >ref|YP_004614296.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] gb|AEH90202.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium opportunistum WSM2075] Length = 285 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 224/285 (78%), Positives = 255/285 (89%) Query: 1 MEHPSLAGRIFRGVALTLILIFFMFPIVWIFLMSFQTNEQILRIPPRILFEPTLANYEAL 60 MEH SL RI RGVALTL++IFFMFPIVWIF+MSFQTNE ILRIPP+++FEPTLANY AL Sbjct: 1 MEHTSLLERILRGVALTLVVIFFMFPIVWIFMMSFQTNETILRIPPQLIFEPTLANYTAL 60 Query: 61 ISGQLRTAAGNLQISFMRNLFNSVVLSSAAVLLALLLGVPAAYAFARFRFRLGESIAFTL 120 I+G+L TAAG L I+FMRNL+NSV LS +V ++LLLGVPAAYAFAR +FR E IAFTL Sbjct: 61 ITGKLMTAAGTLDIAFMRNLWNSVFLSVTSVAVSLLLGVPAAYAFARHKFRGSEDIAFTL 120 Query: 121 LSFRFAPPLLVLLPLSLYYQELGLNDTYFGIVWVYQLIALPLILWIVRGYFEDISPDIEH 180 LSF+FAP LLVLLPL+LY+Q+LGL +TY G++WVYQLI LPLILWIVRGYFEDI DIE+ Sbjct: 121 LSFKFAPALLVLLPLTLYFQKLGLANTYIGLIWVYQLICLPLILWIVRGYFEDIPADIEY 180 Query: 181 AYRLAGHSWREAFTRIAVPLAGPGIAAAGLLSFIFCWNNFVFALILASADKQPVTVGALA 240 AYR+ GHSW F +IA+PLAGPGIAAAGLL+FIF WNNFVFAL+LASADKQPVTVGALA Sbjct: 181 AYRIGGHSWFATFRKIALPLAGPGIAAAGLLAFIFAWNNFVFALVLASADKQPVTVGALA 240 Query: 241 FVTASGIQYGQIAAAIVLSVTPTLLLALYAQRYLVEGLSLGAVKG 285 F+T+SGIQYGQI+AAIVLS+TPTL LALYAQRYLVEGLSLGAVKG Sbjct: 241 FITSSGIQYGQISAAIVLSITPTLALALYAQRYLVEGLSLGAVKG 285