BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0072.p (437 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_557501.1| major facilitator superfamily metabolite/H(+) s... 416 e-114 ref|YP_552968.1| major facilitator superfamily transporter metab... 405 e-111 sp|Q44470.1|TUB4_AGRVI RecName: Full=Putative tartrate transport... 354 1e-95 ref|YP_001927288.1| d-galactonate transporter [Methylobacterium ... 345 7e-93 ref|YP_001241431.1| MFS family transporter [Bradyrhizobium sp. B... 345 1e-92 >ref|YP_557501.1| major facilitator superfamily metabolite/H(+) symporter [Burkholderia xenovorans LB400] gb|ABE29449.1| Major facilitator superfamily (MFS) metabolite/H+ symporter [Burkholderia xenovorans LB400] Length = 446 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/413 (47%), Positives = 288/413 (69%), Gaps = 1/413 (0%) Query: 23 IRKVALRLMWFVMAMYFLAILDRGNISFAALQMNKELGLNAEKFGIAVGIMYFTYSIFEI 82 + ++ RLMW+++A+Y +++LDRGN+SFA+ MNKELGL + +GI VGI++ Y++FE+ Sbjct: 30 VSRIGRRLMWYLIALYVVSVLDRGNLSFASFSMNKELGLTPQMYGIGVGILFLGYALFEV 89 Query: 83 PSNLILSKYGARVTLTRIAILWGIATVLMAFTQGPLSLYAFRGFLGFAESGLFPGVMLLL 142 PSNLIL+KYGARVTLTRIAI++GI T+ MAF +GP S + R LG AE+GL PGV L L Sbjct: 90 PSNLILAKYGARVTLTRIAIMFGIVTMSMAFVRGPYSFFTMRALLGIAEAGLTPGVFLFL 149 Query: 143 SLWFPFSYRARYNAMFNYAVPISYIFASLISGAILELNGVFGISGWKWLFILEGLPPVIL 202 S W P YRARYNAMF+Y++P +Y+ ASL+SGAI++L+G +G+ GWKWLF+LEGLP V L Sbjct: 150 SYWIPQQYRARYNAMFSYSIPAAYVLASLVSGAIMQLDGTWGVPGWKWLFVLEGLPAVTL 209 Query: 203 GIVGIFYLTDRPQQASWLSAAQRNWLIGALERDAKATGVVHAEGVLRTITKPMVLLFGLC 262 G+ G FYLTDRP QA WLS+ ++ WL LE+D A GV+ + +P + + L Sbjct: 210 GVFGAFYLTDRPHQAGWLSSGEKLWLEKQLEKDNVAPAHGVPTGVMALMRRPEMWVLTLG 269 Query: 263 NFGLFCGLASLFPWLPQIIKSFGLPNSQVGFVTAIPPVAGLIGMIALSRHSDHVGERFYY 322 G+F G A++ WLPQI+ G+P +GFV+ +PP+AG++GM LSR SD ER + Sbjct: 270 YVGIFSGNATVGAWLPQILHHAGVPLRTIGFVSMVPPLAGIVGMTLLSRRSDRRKERVLH 329 Query: 323 AAMTFVIAAAGFAIAAFSTSPVWIIIGFMVANVGVYGTQAVFWTIPQSYMSRQSAPGAIG 382 +IAAAG+ A ST+ ++GFM+AN+GVY + AVFW+IPQ+Y+ + P I Sbjct: 330 TVACMLIAAAGYTTVALSTTLAVALVGFMLANIGVYASLAVFWSIPQTYLPANAKPAVIA 389 Query: 383 LVSTIGSI-GGATIPIVIGRAKDASGSFTVGFLVVTGVLLVAAILVLIARSQL 434 ++S+ G+I GG +PI++GR + + + G +VV +++++ V A ++ Sbjct: 390 IISSFGAIFGGWIVPIMVGRLQQQTHNLAAGMIVVAVFFVLSSVCVFFAGRRM 442 >ref|YP_552968.1| major facilitator superfamily transporter metabolite/H(+) symporter [Burkholderia xenovorans LB400] gb|ABE33618.1| Major facilitator superfamily (MFS)metabolite/H+ symporter [Burkholderia xenovorans LB400] Length = 447 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/417 (47%), Positives = 290/417 (69%), Gaps = 3/417 (0%) Query: 23 IRKVALRLMWFVMAMYFLAILDRGNISFAALQMNKELGLNAEKFGIAVGIMYFTYSIFEI 82 + +V RLMW+++A+Y +++LDRGN+SFA+ MNKELGL + + + VGI++ YS+FE+ Sbjct: 31 VSRVGRRLMWYLIALYVVSVLDRGNLSFASFSMNKELGLTPQMYAVGVGILFLGYSLFEV 90 Query: 83 PSNLILSKYGARVTLTRIAILWGIATVLMAFTQGPLSLYAFRGFLGFAESGLFPGVMLLL 142 PSNL L+++GAR+TLTRIAIL+G+ T+ MAF GP S Y R LG AE+GL PGV L L Sbjct: 91 PSNLALARFGARITLTRIAILFGLVTMSMAFVTGPRSFYTVRALLGIAEAGLTPGVFLFL 150 Query: 143 SLWFPFSYRARYNAMFNYAVPISYIFASLISGAILELNGVFGISGWKWLFILEGLPPVIL 202 S W P +RARYNAMF+Y++P +Y+ +SL+SGAI++L+G +G+ GWKWLF+LEGLP V+L Sbjct: 151 SYWIPQQHRARYNAMFSYSIPAAYVVSSLVSGAIMQLDGAWGVPGWKWLFLLEGLPAVML 210 Query: 203 GIVGIFYLTDRPQQASWLSAAQRNWLIGALER-DAKATGVVHAEGVLRTITKPMVLLFGL 261 GI G FYLTDRP QA+WLSA +++WL LE DA + V A GV+ + +P + + L Sbjct: 211 GIFGAFYLTDRPHQATWLSADEKSWLAKQLESGDAPSAHGVPA-GVMTLLRRPEMWVLTL 269 Query: 262 CNFGLFCGLASLFPWLPQIIKSFGLPNSQVGFVTAIPPVAGLIGMIALSRHSDHVGERFY 321 G+F G A++ WLPQI+ G+P S +GFVTA+PP+AG++GM LSR SD ER Sbjct: 270 GYVGIFSGNATVGAWLPQILHHTGVPLSIIGFVTALPPLAGIVGMTFLSRRSDRSKERVL 329 Query: 322 YAAMTFVIAAAGFAIAAFSTSPVWIIIGFMVANVGVYGTQAVFWTIPQSYMSRQSAPGAI 381 + +IAA G+ A S + + GF +AN+GVY + A+FW+IPQ+Y+ ++ P I Sbjct: 330 HTVAAMLIAAVGYTTVAMSGTLAVALFGFALANIGVYASLAIFWSIPQTYLPARAKPAVI 389 Query: 382 GLVSTIGSI-GGATIPIVIGRAKDASGSFTVGFLVVTGVLLVAAILVLIARSQLVKE 437 ++S+ G+I GG +P++IGR + + S G +VV + +++++ V A +L Sbjct: 390 AVISSFGAILGGWVVPMMIGRVQQQAHSLAAGMIVVAILFVLSSVCVFFAGRRLASR 446 >sp|Q44470.1|TUB4_AGRVI RecName: Full=Putative tartrate transporter gb|AAA68697.1| putative tartrate transporter; inducible by tartrate; Method: conceptual translation supplied by author [Agrobacterium vitis] prf||2124372B ttuB gene Length = 433 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 179/415 (43%), Positives = 266/415 (64%), Gaps = 1/415 (0%) Query: 15 DPEIERSTIRKVALRLMWFVMAMYFLAILDRGNISFAALQMNKELGLNAEKFGIAVGIMY 74 + ++E +RK+ LR++ F+M +YF+A LDR NI FAAL MN++LG ++ FGI GI + Sbjct: 2 NSDLETRVLRKITLRIVPFIMLLYFVAFLDRVNIGFAALTMNEDLGFSSTVFGIGAGIFF 61 Query: 75 FTYSIFEIPSNLILSKYGARVTLTRIAILWGIATVLMAFTQGPLSLYAFRGFLGFAESGL 134 Y +FE+PSNLIL+K GAR+ + R+ I WGI + LMAF QG S YA R LG AE+G Sbjct: 62 VGYFLFEVPSNLILNKVGARIWIARVMITWGIVSGLMAFVQGTTSFYALRFLLGVAEAGF 121 Query: 135 FPGVMLLLSLWFPFSYRARYNAMFNYAVPISYIFASLISGAILELNGVFGISGWKWLFIL 194 FPG++L LS WFP RA A+F A P+S + S ISGA++E++G G++GW+W+F++ Sbjct: 122 FPGIILYLSFWFPARRRAAVTAIFMAAAPLSTVLGSPISGALMEMHGFLGLAGWQWMFLI 181 Query: 195 EGLPPVILGIVGIFYLTDRPQQASWLSAAQRNWLIGALERDAKATGVVHAEGVLRTITKP 254 E P VILG+V +FYLTDRP++A WLS +RNWL+ + + A G + +L + Sbjct: 182 EAAPAVILGVVVLFYLTDRPEKAKWLSEDERNWLVKTMNAEQAAKGKA-SHSILAGLADI 240 Query: 255 MVLLFGLCNFGLFCGLASLFPWLPQIIKSFGLPNSQVGFVTAIPPVAGLIGMIALSRHSD 314 V+ L FG GL +L W PQIIK FGL + QVGF+ A+P + + M+ +RHSD Sbjct: 241 RVIALALVYFGTSAGLYTLGIWAPQIIKEFGLSSLQVGFINAVPGIFAVAAMVLWARHSD 300 Query: 315 HVGERFYYAAMTFVIAAAGFAIAAFSTSPVWIIIGFMVANVGVYGTQAVFWTIPQSYMSR 374 GER ++ ++AA G A A +TS ++I + N+G+ ++ W++P ++S Sbjct: 301 KTGERTWHVVGACLLAAVGLAFATGATSVFTVLIALTLVNIGISCSKPPLWSMPTLFLSG 360 Query: 375 QSAPGAIGLVSTIGSIGGATIPIVIGRAKDASGSFTVGFLVVTGVLLVAAILVLI 429 +A I +++IG++GG P +IG KD +GSF G V G+L+V+AI+ L+ Sbjct: 361 PAAAAGIATINSIGNLGGFVGPSMIGWIKDTTGSFAGGLYFVAGLLVVSAIVTLV 415 >ref|YP_001927288.1| d-galactonate transporter [Methylobacterium populi BJ001] gb|ACB82753.1| d-galactonate transporter [Methylobacterium populi BJ001] Length = 432 Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 181/422 (42%), Positives = 266/422 (63%), Gaps = 1/422 (0%) Query: 17 EIERSTIRKVALRLMWFVMAMYFLAILDRGNISFAALQMNKELGLNAEKFGIAVGIMYFT 76 +ER+T+R+V+ RL+ F+ +YF+A +DR NI FAAL MNK+LG ++ FG G+ +F Sbjct: 4 SLERATMRRVSWRLVPFICLLYFIAFIDRVNIGFAALTMNKDLGFSSAVFGFGAGVFFFG 63 Query: 77 YSIFEIPSNLILSKYGARVTLTRIAILWGIATVLMAFTQGPLSLYAFRGFLGFAESGLFP 136 Y +FE+PSN++L K GAR+ + R+ I WGI + AF G S Y R LG AE+G FP Sbjct: 64 YFLFEVPSNIVLDKVGARIWIARVMITWGIISGSFAFVSGEYSFYVLRFLLGAAEAGFFP 123 Query: 137 GVMLLLSLWFPFSYRARYNAMFNYAVPISYIFASLISGAILELNGVFGISGWKWLFILEG 196 G++L LS WFP YRA ++F A PIS + S +S A+L ++G++G+ GW+W+FI+E Sbjct: 124 GIILYLSYWFPTRYRAGVVSLFMAAAPISVVIGSPLSSALLAMDGIWGLHGWQWMFIIEA 183 Query: 197 LPPVILGIVGIFYLTDRPQQASWLSAAQRNWLIGALERDAKATGVVHAEGVLRTITKPMV 256 +P VILG+V +FY+TDRP++A WL QRNWL+ + + V G+L + P V Sbjct: 184 IPAVILGVVVLFYMTDRPEKAKWLPEDQRNWLVAEMNEEHARKQVAAKHGILAGMADPRV 243 Query: 257 LLFGLCNFGLFCGLASLFPWLPQIIKSFGLPNSQVGFVTAIPPVAGLIGMIALSRHSDHV 316 L L FG GL +L W PQIIKSFGL VGF+ +PP +I MI +RHSD Sbjct: 244 LALALVYFGTSAGLYTLGIWAPQIIKSFGLSTMAVGFLNGVPPTIAIIAMILWARHSDKT 303 Query: 317 GERFYYAAMTFVIAAAGFAIAAFSTSPVWIIIGFMVANVGVYGTQAVFWTIPQSYMSRQS 376 GER ++ + ++A+ G +A +TS + +I + NVG+ + W +P ++S Q+ Sbjct: 304 GERTWHVVIACLVASVGLMLAGGATSALAVIAALSLVNVGISAAKPPLWAMPTMFLSGQA 363 Query: 377 APGAIGLVSTIGSIGGATIPIVIGRAKDASGSFTVGFLVVTGVLLVAAILVLI-ARSQLV 435 A I +++IG++GG P IG KD +GSFT G + V+G+L+++AI+ LI ARS Sbjct: 364 AAVGIATINSIGNLGGFVGPWAIGWIKDQTGSFTGGLIFVSGLLVLSAIVTLIVARSGRR 423 Query: 436 KE 437 E Sbjct: 424 TE 425 >ref|YP_001241431.1| MFS family transporter [Bradyrhizobium sp. BTAi1] gb|ABQ37525.1| putative transport protein, MFS superfamily [Bradyrhizobium sp. BTAi1] Length = 432 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 178/421 (42%), Positives = 267/421 (63%), Gaps = 1/421 (0%) Query: 17 EIERSTIRKVALRLMWFVMAMYFLAILDRGNISFAALQMNKELGLNAEKFGIAVGIMYFT 76 E+E +RK+ LR++ F+M +YF+A +DR N+ FAAL MNK++GL+A +G GI ++ Sbjct: 4 ELETRVLRKITLRIVPFIMLLYFVAFIDRVNVGFAALTMNKDIGLSASAYGFGAGIFFWG 63 Query: 77 YSIFEIPSNLILSKYGARVTLTRIAILWGIATVLMAFTQGPLSLYAFRGFLGFAESGLFP 136 Y +FE+PSNL L K+GAR+ + R+ I WG+ + MAF QGP+S Y R LG AE+G FP Sbjct: 64 YFLFEVPSNLALDKFGARIWIARVMITWGLVSGAMAFVQGPMSFYVLRFLLGAAEAGFFP 123 Query: 137 GVMLLLSLWFPFSYRARYNAMFNYAVPISYIFASLISGAILELNGVFGISGWKWLFILEG 196 G++L LS WFP RA A+F A P+S + S +SGA+LE++G+ G GW+WLF++E Sbjct: 124 GIILYLSYWFPARQRAAVTALFMAAAPLSTVLGSPVSGALLEMDGILGFKGWQWLFLIEA 183 Query: 197 LPPVILGIVGIFYLTDRPQQASWLSAAQRNWLIGALERDAKATGVVHAEGVLRTITKPMV 256 LP V+LG V + Y+TDRP+QA WL+ +R+WL+ + + + + + R + V Sbjct: 184 LPAVLLGFVVLGYMTDRPEQARWLADEERDWLVRTMNAELASKAATASHSIWRGLADIRV 243 Query: 257 LLFGLCNFGLFCGLASLFPWLPQIIKSFGLPNSQVGFVTAIPPVAGLIGMIALSRHSDHV 316 L L FG GL +L W PQIIK FGL + VGF+ A+PP ++ MI +RHSD Sbjct: 244 LALALVYFGTSAGLYTLGVWAPQIIKQFGLSSFAVGFLNAVPPTIAVVVMILWARHSDRT 303 Query: 317 GERFYYAAMTFVIAAAGFAIAAFSTSPVWIIIGFMVANVGVYGTQAVFWTIPQSYMSRQS 376 ER ++ + V+AA G +A STS ++ + NVG+ ++ W++P ++S + Sbjct: 304 AERTWHVVLACVVAAVGLWLAGLSTSVAAVLAALTLVNVGISSSKPPLWSMPTMFLSGSA 363 Query: 377 APGAIGLVSTIGSIGGATIPIVIGRAKDASGSFTVGFLVVTGVLLVAAIL-VLIARSQLV 435 A I +++IG++GG P +IG KD +GSF G V G+L+V+A+L +L+ARSQ Sbjct: 364 AAAGIATINSIGNLGGFVGPAMIGWIKDQTGSFNGGLYFVAGLLVVSAVLTLLLARSQSA 423 Query: 436 K 436 K Sbjct: 424 K 424