BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0061.p (506 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_578199.1| hypothetical protein Nham_2979 [Nitrobacter ham... 840 0.0 ref|YP_001768167.1| hypothetical protein M446_1208 [Methylobacte... 626 e-177 ref|YP_260554.1| hypothetical protein PFL_3450 [Pseudomonas fluo... 618 e-175 ref|YP_003907068.1| hypothetical protein BC1003_1811 [Burkholder... 596 e-168 ref|YP_306546.1| hypothetical protein Mbar_A3077 [Methanosarcina... 550 e-154 >ref|YP_578199.1| hypothetical protein Nham_2979 [Nitrobacter hamburgensis X14] gb|ABE63739.1| protein of unknown function DUF1214 [Nitrobacter hamburgensis X14] Length = 462 Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/462 (89%), Positives = 436/462 (94%) Query: 45 LPPSPEWARALPPGPDARVKITEAYAAHVARDAFFWAWPLVNMFNRRLAFSKMTEQRYVG 104 +P SPEWARALPPGPDARVKITEAYAAHVARD FFWAWPLVNM+NRRLAFSKMTEQRYVG Sbjct: 1 MPLSPEWARALPPGPDARVKITEAYAAHVARDVFFWAWPLVNMYNRRLAFSKMTEQRYVG 60 Query: 105 PLLEAPLNRLTMLTDYVDPEERNVACPNQDVVYGLGMIALDVSPVVVQVPDFGDRFWVYQ 164 PLLEAPLNRLTMLTDYVDPEERNVACPNQDVVYGLGM+AL+VSPVVVQVPDFGDRFWVYQ Sbjct: 61 PLLEAPLNRLTMLTDYVDPEERNVACPNQDVVYGLGMVALEVSPVVVQVPDFGDRFWVYQ 120 Query: 165 IVDLRTDSFVQLGKMYGTLPGFYLLVGPNWNSEVPKGISRVFRASSNTGLIAPRVFQDDT 224 IVDLRTDSFVQLGKM+G+ PGFYLLVGPNWN +VP GI+RVFRASSNTGL+APR+ Q+DT Sbjct: 121 IVDLRTDSFVQLGKMHGSTPGFYLLVGPNWNGQVPNGITRVFRASSNTGLVAPRIAQNDT 180 Query: 225 PQDKRAIQAALTGIAMYPLAEYDGRTKSMEWSKLPKVPGAPHGEEETRWVFPEKFFDELP 284 P+DKRAIQ ALTGIAMYPLAEYDGR KS+EWSKLPKVPGAP GEEETRWV+PEKFFDELP Sbjct: 181 PEDKRAIQGALTGIAMYPLAEYDGRMKSIEWSKLPKVPGAPPGEEETRWVYPEKFFDELP 240 Query: 285 AVLADAPPLPGEEARYAQVLAVLAAAKDNSKLKQAMIEAAKDAEEKLVNPLFQLRNYGQQ 344 VLADAPPL GEEA YAQVLAVLAAAKDN K+KQAMI AAKDAEEKLVNPLFQ RNYGQQ Sbjct: 241 MVLADAPPLSGEEACYAQVLAVLAAAKDNPKIKQAMIGAAKDAEEKLVNPLFQFRNYGQQ 300 Query: 345 LPHNWSTISNESAFGTDYFTRTAVAKSNILVNSPNETKYYYQDLDASGGRLNSANRYTVT 404 LPH+WSTISNESAFGTDYFTRTAVAKSNILVNSP+ETKY+YQD DASG RLNS+NRYTVT Sbjct: 301 LPHHWSTISNESAFGTDYFTRTAVAKSNILVNSPDETKYFYQDFDASGARLNSSNRYTVT 360 Query: 405 FAKDGTPPVNGFWSLSIYNEHHFFVANPINRFSVGTKNKDLGPGPDGSLTIYVQADAPTD 464 FAKDGTPPVNGFWSLSIYNEHHFFVANPINRFSVGTKNKDL DGSLTIYVQ+DAPTD Sbjct: 361 FAKDGTPPVNGFWSLSIYNEHHFFVANPINRFSVGTKNKDLKFAADGSLTIYVQSDAPTD 420 Query: 465 PTQRANWLPAPNGDFSLYIRAYWPKAPVLDGSWTPPAVQRVS 506 QRANWLPAP G+FSL+ RAYWPK PVLDG+WTPPAVQRVS Sbjct: 421 AVQRANWLPAPKGNFSLFGRAYWPKVPVLDGTWTPPAVQRVS 462 >ref|YP_001768167.1| hypothetical protein M446_1208 [Methylobacterium sp. 4-46] gb|ACA15733.1| protein of unknown function DUF1214 [Methylobacterium sp. 4-46] Length = 484 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 306/464 (65%), Positives = 362/464 (78%), Gaps = 5/464 (1%) Query: 45 LPPSPEWARALPPGPDARVKITEAYAAHVARDAFFWAWPLVNMFNRRLAFSKMTEQRYV- 103 L PSP+WA ALPP PD+ VKITEAYA VARDA+FWAWP+ N++NRR A S++ E + Sbjct: 20 LAPSPDWAAALPPAPDSAVKITEAYARMVARDAYFWAWPMENIYNRRQANSQVREAGLMN 79 Query: 104 GPLLEAPLNRLTMLTDYVDPEERNVACPNQDVVYGLGMIALDVSPVVVQVPDFGDRFWVY 163 G L APLN + ML DY+ PE+R VACPNQDVVYG + ALD +PVV+QVPDFG RFWVY Sbjct: 80 GVLAFAPLNAMAMLHDYIAPEQRWVACPNQDVVYGASIAALDETPVVLQVPDFGSRFWVY 139 Query: 164 QIVDLRTDSFVQLGKMYGTLPGFYLLVGPNWNSEVPKGISRVFRASSNTGLIAPRVFQDD 223 Q+VD RTD F QLG MYGT PGFYLLVGPNW EVPKGI+RVFRA + T + PRVF DD Sbjct: 140 QVVDTRTDGFAQLGSMYGTRPGFYLLVGPNWTGEVPKGIARVFRAKTGTAFVLPRVFMDD 199 Query: 224 TPQDKRAIQAALTGIAMYPLAEYDGRTKSMEWSKLPKVPGAPHGEEE--TRWVFPEKFFD 281 TP+D+RAIQ+A++GI YPLA++DG K +W +LPK+ G T+WV PEKFFD Sbjct: 200 TPEDRRAIQSAISGIDAYPLAQFDGTMKRHDWRQLPKLGSPGEGGGSGETKWVLPEKFFD 259 Query: 282 ELPAVLADAPPLPGEEARYAQVLAVLAAAKDNSKLKQAMIEAAKDAEEKLVNPLFQLRNY 341 ELP VL DAPPLPGEEARYAQV AVLAAA+ + LKQAM + A AE ++V+PL Q RN+ Sbjct: 260 ELPLVLRDAPPLPGEEARYAQVTAVLAAARRDPALKQAMADEASKAEREMVDPLLQFRNW 319 Query: 342 GQQLPHNWSTISNESAFGTDYFTRTAVAKSNILVNSPNETKYYYQDLDASGGRLNSANRY 401 G QL +WST SN +AFG DYFTRTA AKSNI VN+PNETKYYYQDLD SG RLN A RY Sbjct: 320 GVQLKDHWSTTSNNAAFGVDYFTRTAAAKSNIFVNAPNETKYYYQDLDVSGARLNGAKRY 379 Query: 402 TVTFAKDGTPPVNGFWSLSIYNEHHFFVANPINRFSVGTKNKDLGPGPDGSLTIYVQADA 461 TVTFAK TPPV+GFWSL++Y+ HFFV N I R+S+GTKNK + GPDGSLT+YVQ++ Sbjct: 380 TVTFAKGETPPVDGFWSLTLYDAAHFFVPNAIQRYSLGTKNKAMKYGPDGSLTVYVQSEP 439 Query: 462 PTDPTQRANWLPAP-NGDFSLYIRAYWPKAPVLDGSWTPPAVQR 504 P + QR NWLPAP +GDF+LY+RAYWP+ V+DGSW PPAVQR Sbjct: 440 PPE-AQRDNWLPAPKDGDFTLYVRAYWPRTAVVDGSWVPPAVQR 482 >ref|YP_260554.1| hypothetical protein PFL_3450 [Pseudomonas fluorescens Pf-5] gb|AAY92718.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 510 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 285/450 (63%), Positives = 355/450 (78%), Gaps = 3/450 (0%) Query: 58 GPDARVKITEAYAAHVARDAFFWAWPLVNMFNRRLAFSKMTEQRYVGPLLE-APLNRLTM 116 GP+A VK+T+ Y +AR+A+FW WP+ N+FNRR F + E +G ++ AP+N L+M Sbjct: 61 GPEADVKVTQTYVRMMAREAYFWGWPMANIFNRRQKFKDLPEPGLMGGIVPVAPINHLSM 120 Query: 117 LTDYVDPEERNVACPNQDVVYGLGMIALDVSPVVVQVPDFGDRFWVYQIVDLRTDSFVQL 176 LTDY+ P ER VACPNQDVVYG G IALD+ PVV+QVPDFGDRFWVYQ+VDLR+DSF +L Sbjct: 121 LTDYISPGERLVACPNQDVVYGAGSIALDIEPVVIQVPDFGDRFWVYQLVDLRSDSFAEL 180 Query: 177 GKMYGTLPGFYLLVGPNWNSEVPKGISRVFRASSNTGLIAPRVFQDDTPQDKRAIQAALT 236 GKMYGT PGFYLLVGP+WN +VP+GI++VFRA +NTG + PRVFQDDT +D++AIQ L+ Sbjct: 181 GKMYGTKPGFYLLVGPDWNGKVPEGIAQVFRAKTNTGFVIPRVFQDDTAEDRKAIQPYLS 240 Query: 237 GIAMYPLAEYDGRTKSMEWSKLPKVPGAPHGEEETRWVFPEKFFDELPAVLADAPPLPGE 296 GI MYPL++YDG+ K +WSK PK P G+EETRWV PEKFFDELPA+L DA PLPGE Sbjct: 241 GIDMYPLSKYDGKLKQRDWSKSPKFPAEASGDEETRWVLPEKFFDELPAILKDARPLPGE 300 Query: 297 EARYAQVLAVLAAAKDNSKLKQAMIEAAKDAEEKLVNPLFQLRNYGQQLPHNWSTISNES 356 EARYAQ+ + A+ + +LK+AMI+ A+ A+ ++V PL Q RNYGQQLPH+WSTISN + Sbjct: 301 EARYAQLAVLAQIAQRDPELKKAMIDEAQKADSEVVKPLLQFRNYGQQLPHHWSTISNGA 360 Query: 357 AFGTDYFTRTAVAKSNILVNSPNETKYYYQDLDASGGRLNSANRYTVTFAKDGTPPVNGF 416 AFGTDYF RTAVA+SNI VN ETKY+YQDLD +G RLN A RY+VTF K PPV GF Sbjct: 361 AFGTDYFLRTAVARSNIFVNKQIETKYFYQDLDEAGTRLNGAQRYSVTFPKGALPPVKGF 420 Query: 417 WSLSIYNEHHFFVANPINRFSVGTKNKDLGPGPDGSLTIYVQADAPTDPTQRANWLPAPN 476 WSL++YN+ HFF NP+ R+S+GTKNK L DGSLT+YVQ+D+P + +NWLPAP Sbjct: 421 WSLTLYNQQHFFAENPLGRYSLGTKNKALKSNADGSLTLYVQSDSP-GADKESNWLPAPQ 479 Query: 477 G-DFSLYIRAYWPKAPVLDGSWTPPAVQRV 505 G DFSLY+RAYWP+A ++G WTPPAV +V Sbjct: 480 GADFSLYVRAYWPEAAAMNGQWTPPAVVKV 509 >ref|YP_003907068.1| hypothetical protein BC1003_1811 [Burkholderia sp. CCGE1003] gb|ADN57777.1| protein of unknown function DUF1214 [Burkholderia sp. CCGE1003] Length = 491 Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust. Identities = 298/487 (61%), Positives = 367/487 (75%), Gaps = 14/487 (2%) Query: 20 AVASVLSGSTTSVASADASSLNPQPLPPSPEWARALPPGPDARVKITEAYAAHVARDAFF 79 AV+++LS SVA A + PSP W A+P GPDA V+ITE+YA VARD +F Sbjct: 11 AVSALLS--VGSVAHAGG-------VAPSPGWNVAMPGGPDASVRITESYARMVARDTYF 61 Query: 80 WAWPLVNMFNRRLAFSKMTEQRYV-GPLLEAPLNRLTMLTDYVDPEERNVACPNQDVVYG 138 WAWP+VN++NRRLAF + + G L APLNRL ML DY+ PE+R VACPNQDV YG Sbjct: 62 WAWPMVNIYNRRLAFKQAPRVGLMNGTLPFAPLNRLAMLHDYIQPEQRWVACPNQDVAYG 121 Query: 139 LGMIALDVSPVVVQVPDFGDRFWVYQIVDLRTDSFVQLGKMYGTLPGFYLLVGPNWNSEV 198 G+ ALD +PVVVQVPDFG RFWVYQIV+ RTDSF QLG MYGT PGFYLLVGP+WN +V Sbjct: 122 AGIAALDETPVVVQVPDFGTRFWVYQIVNTRTDSFAQLGSMYGTRPGFYLLVGPDWNGKV 181 Query: 199 PKGISRVFRASSNTGLIAPRVFQDDTPQDKRAIQAALTGIAMYPLAEYDGRTKSMEWSKL 258 P GI++VFR+S+NT + PRVF DDT +D+ AIQ AL GI +Y L+E+DG+ K +WS+L Sbjct: 182 PAGITKVFRSSTNTAFVVPRVFMDDTAEDRVAIQPALAGIDIYSLSEFDGKLKHHDWSQL 241 Query: 259 P--KVPGAPHGEEETRWVFPEKFFDELPAVLADAPPLPGEEARYAQVLAVLAAAKDNSKL 316 P K P ET+WV PEKFFDELP VL D+PPLPGEEARYAQ+ AVLAAAKD+ L Sbjct: 242 PALKSPTGDDSSGETKWVLPEKFFDELPLVLKDSPPLPGEEARYAQINAVLAAAKDDPAL 301 Query: 317 KQAMIEAAKDAEEKLVNPLFQLRNYGQQLPHNWSTISNESAFGTDYFTRTAVAKSNILVN 376 K+AMI+ A E +L++PL Q RN+G+ ++WS+ +N ++FGTDYFTRTAVAKSNILVN Sbjct: 302 KRAMIDEAVKTEHELIDPLLQFRNWGRPAGNHWSSTANNASFGTDYFTRTAVAKSNILVN 361 Query: 377 SPNETKYYYQDLDASGGRLNSANRYTVTFAKDGTPPVNGFWSLSIYNEHHFFVANPINRF 436 +P ETKY YQDLDA+G RL+ NRY VTF K TPPV+GFWSL++Y++ HFFV N + R+ Sbjct: 362 APTETKYLYQDLDANGQRLSGTNRYMVTFPKGQTPPVDGFWSLTLYDDAHFFVPNRLKRY 421 Query: 437 SVGTKNKDLGPGPDGSLTIYVQADAPTDPTQRANWLPAPNGD-FSLYIRAYWPKAPVLDG 495 S+GTKN++L DGSLT+YVQAD+P + NWLPAP G FSLY+RAYWPK ++DG Sbjct: 422 SLGTKNRNLKFNADGSLTLYVQADSP-GADRETNWLPAPAGAPFSLYLRAYWPKTGIVDG 480 Query: 496 SWTPPAV 502 SW PP V Sbjct: 481 SWAPPPV 487 >ref|YP_306546.1| hypothetical protein Mbar_A3077 [Methanosarcina barkeri str. Fusaro] gb|AAZ71966.1| conserved hypothetical transmembrane protein [Methanosarcina barkeri str. Fusaro] Length = 474 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 255/450 (56%), Positives = 330/450 (73%), Gaps = 2/450 (0%) Query: 58 GPDARVKITEAYAAHVARDAFFWAWPLVNMFNRRLAFSKMTEQRYVGPLLE-APLNRLTM 116 GP A ++TE Y + R A+F WP+VNM NR F K+ E G ++ APLN+L+M Sbjct: 26 GPIAGTRLTEEYVRMLGRLAYFMTWPMVNMHNRHTIFQKVPEPGLAGGIVPVAPLNQLSM 85 Query: 117 LTDYVDPEERNVACPNQDVVYGLGMIALDVSPVVVQVPDFGDRFWVYQIVDLRTDSFVQL 176 LTDY+DP ER VACPNQDVVYG G+I+LD PV+VQVPDFGDRFWVYQ D RTD F +L Sbjct: 86 LTDYIDPMERIVACPNQDVVYGFGIISLDREPVIVQVPDFGDRFWVYQACDQRTDGFTRL 145 Query: 177 GKMYGTLPGFYLLVGPNWNSEVPKGISRVFRASSNTGLIAPRVFQDDTPQDKRAIQAALT 236 GKMYGT PGFY+LVGP W ++PKG+ VFR+ +N G+I PRVF +DTP D++ IQ ++ Sbjct: 146 GKMYGTEPGFYMLVGPEWKGDLPKGVKDVFRSPTNIGVIIPRVFMNDTPDDRKKIQPLIS 205 Query: 237 GIAMYPLAEYDGRTKSMEWSKLPKVPGAPHGEEETRWVFPEKFFDELPAVLADAPPLPGE 296 I YPL+++ G K+ +WSK P+ P GEEE +WV PE F + LP VL + PPLP E Sbjct: 206 QIMAYPLSQFTGEIKTKDWSKTPEFPSIGGGEEEVQWVVPEAFPEVLPQVLDEVPPLPSE 265 Query: 297 EARYAQVLAVLAAAKDNSKLKQAMIEAAKDAEEKLVNPLFQLRNYGQQLPHNWSTISNES 356 E Y Q+ AVL AA +N+ LK + +A+ +A+++L+ PLFQ RNYG P+NW+TI+N + Sbjct: 266 ETLYEQIRAVLKAADENTTLKNVLQQASIEADKELIKPLFQFRNYGIPCPYNWTTITNGA 325 Query: 357 AFGTDYFTRTAVAKSNILVNSPNETKYYYQDLDASGGRLNSANRYTVTFAKDGTPPVNGF 416 FGTDYFTRTAVAKSNI VN P ETKY+YQDLDA+G RLN + YTV F++ PPV GF Sbjct: 326 VFGTDYFTRTAVAKSNIFVNQPLETKYFYQDLDAAGERLNGGHYYTVIFSRGMLPPVKGF 385 Query: 417 WSLSIYNEHHFFVANPINRFSVGTKNKDLGPGPDGSLTIYVQADAPTDPTQRANWLPAPN 476 WSL++YNE+HFF N +NR+S+GTKN++L G DGSLT+YVQA+ P + + NWLPAP Sbjct: 386 WSLTLYNEYHFFAPNTLNRYSLGTKNRNLQYGTDGSLTLYVQAEPPEE-EKLPNWLPAPE 444 Query: 477 GDFSLYIRAYWPKAPVLDGSWTPPAVQRVS 506 DF+LY+R YWPK +L+ WTPP+V+R+ Sbjct: 445 SDFTLYLRTYWPKIDILENRWTPPSVKRIK 474