BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0051.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01728236.1| hypothetical protein CY0110_28204 [Cyanothece... 275 5e-72 ref|YP_002005544.1| hypothetical protein RALTA_A1529 [Cupriavidu... 275 6e-72 ref|YP_726105.1| hypothetical protein H16_A1605 [Ralstonia eutro... 274 1e-71 ref|YP_297095.1| hypothetical protein Reut_A2890 [Ralstonia eutr... 263 3e-68 ref|YP_002540839.1| hypothetical protein Arad_7823 [Agrobacteriu... 259 2e-67 >ref|ZP_01728236.1| hypothetical protein CY0110_28204 [Cyanothece sp. CCY0110] gb|EAZ92318.1| hypothetical protein CY0110_28204 [Cyanothece sp. CCY0110] Length = 305 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 135/262 (51%), Positives = 181/262 (69%) Query: 1 MRGRGLNFEEIRDYRPGDDVREIDWKVTARLQKPHVRVFNEERDRQALLVVDQRLSMFFG 60 +RGRGLNFEE+R Y+PGDD+R IDWKVTAR K + RV+ EERDR LL+VDQR+ MFFG Sbjct: 42 LRGRGLNFEELRRYQPGDDIRTIDWKVTARTGKTYTRVYTEERDRPTLLIVDQRVCMFFG 101 Query: 61 SRRAMKSVTAAETAAIGAWRVLGVGDRVGAIVFNDSDVVELAARRSRATVLQILSTIVAQ 120 S++AMKSVTAAE AA+ AWRV+ GDRVGAIVFNDS + ++ RSR V+QIL TI Q Sbjct: 102 SQKAMKSVTAAEVAALTAWRVVDAGDRVGAIVFNDSKIEQIRPYRSRDRVMQILKTIAIQ 161 Query: 121 NQALGVGRGLVPASGMLNRALERAERRTMHDATVILISDFDGADAATRRMIGAIARHNNV 180 NQAL + R + + MLN+AL R HD + LISD GAD ++ ++ +ARHN+V Sbjct: 162 NQALRLNREMTSNATMLNQALTYGVRSATHDYLICLISDLRGADETSKELMTRLARHNDV 221 Query: 181 VAVLVHDPLQSDLPASSRMTVTDGELQIQLEVGRESVRKSIAQASQERLRGVFAWTRELG 240 + V V+DPL+ +LP++ R+TV+DGE Q+ + +R+ Q+RL + Sbjct: 222 IVVFVYDPLEKELPSAGRLTVSDGEQQLIINSSNSKLRQQYQSNFQQRLNIGKEILLKQK 281 Query: 241 IPVLPLSTAEETAPQLRRLLGG 262 +P+L ++T E+ A QL RLLGG Sbjct: 282 VPLLEINTDEDAAIQLIRLLGG 303 >ref|YP_002005544.1| hypothetical protein RALTA_A1529 [Cupriavidus taiwanensis LMG 19424] emb|CAQ69477.1| conserved hypothetical protein; putative exported protein [Cupriavidus taiwanensis LMG 19424] Length = 339 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 146/261 (55%), Positives = 183/261 (70%) Query: 1 MRGRGLNFEEIRDYRPGDDVREIDWKVTARLQKPHVRVFNEERDRQALLVVDQRLSMFFG 60 +RGRGL FEE+R Y PGDD+R +DW+VTAR +PHVRV+ EE+DR LLVVDQR++MFFG Sbjct: 63 VRGRGLAFEELRLYLPGDDIRSMDWRVTARTGRPHVRVYTEEKDRPVLLVVDQRINMFFG 122 Query: 61 SRRAMKSVTAAETAAIGAWRVLGVGDRVGAIVFNDSDVVELAARRSRATVLQILSTIVAQ 120 SRRAMKSV+AAE AA+ AWRVL GDRVG +V D + A RRSR V Q+L I Sbjct: 123 SRRAMKSVSAAEAAALAAWRVLAEGDRVGGVVLGDDRIEAFAPRRSRDAVQQLLGGIARF 182 Query: 121 NQALGVGRGLVPASGMLNRALERAERRTMHDATVILISDFDGADAATRRMIGAIARHNNV 180 NQAL A+G LN ALER R HD VI++SDFDG D TR ++ A+A HN+V Sbjct: 183 NQALRADAPARRAAGQLNAALERTARMARHDCLVIVVSDFDGHDTRTRDLMLALATHNDV 242 Query: 181 VAVLVHDPLQSDLPASSRMTVTDGELQIQLEVGRESVRKSIAQASQERLRGVFAWTRELG 240 + +LVHDP LP S ++ V+DGELQ++L G + R+ IA+ + R R + W +G Sbjct: 243 LTILVHDPFLGALPGSGQLVVSDGELQVELGFGHAATRRGIAEFADARARSLLDWHHAMG 302 Query: 241 IPVLPLSTAEETAPQLRRLLG 261 +P+LPLS AEETAPQLRRLLG Sbjct: 303 VPLLPLSAAEETAPQLRRLLG 323 >ref|YP_726105.1| hypothetical protein H16_A1605 [Ralstonia eutropha H16] emb|CAJ92737.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 340 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 147/261 (56%), Positives = 183/261 (70%) Query: 1 MRGRGLNFEEIRDYRPGDDVREIDWKVTARLQKPHVRVFNEERDRQALLVVDQRLSMFFG 60 +RGRGL FEE+R Y PGDD+R +DW+VTAR KPHVRV+ EE+DR LLVVDQR++MFFG Sbjct: 64 VRGRGLTFEELRLYLPGDDIRSMDWRVTARTGKPHVRVYTEEKDRPVLLVVDQRINMFFG 123 Query: 61 SRRAMKSVTAAETAAIGAWRVLGVGDRVGAIVFNDSDVVELAARRSRATVLQILSTIVAQ 120 SRRAMKSV+AAE AA+ AWRVL GDRVG +VF D+ E RRSR V Q+L I Sbjct: 124 SRRAMKSVSAAEAAALAAWRVLAEGDRVGGVVFGDAKAEEFTPRRSREAVQQLLGAIARF 183 Query: 121 NQALGVGRGLVPASGMLNRALERAERRTMHDATVILISDFDGADAATRRMIGAIARHNNV 180 NQAL A+G LN ALERA R HD VI+ISDFDG D TR ++ +A N+V Sbjct: 184 NQALRADAPARRAAGKLNAALERAARTARHDCLVIVISDFDGHDDRTRDLMLEMAARNDV 243 Query: 181 VAVLVHDPLQSDLPASSRMTVTDGELQIQLEVGRESVRKSIAQASQERLRGVFAWTRELG 240 + +LVHDP S+LP S ++ V+DGELQ++L G + R+SIA+ + + W +G Sbjct: 244 LTILVHDPFLSELPESGQLVVSDGELQVELGFGHAATRRSIAEFVDTHAKALLDWHHAIG 303 Query: 241 IPVLPLSTAEETAPQLRRLLG 261 +P+LPLS AEETA QLRRLLG Sbjct: 304 VPLLPLSAAEETALQLRRLLG 324 >ref|YP_297095.1| hypothetical protein Reut_A2890 [Ralstonia eutropha JMP134] gb|AAZ62251.1| Protein of unknown function DUF58 [Ralstonia eutropha JMP134] Length = 341 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 147/264 (55%), Positives = 185/264 (70%), Gaps = 6/264 (2%) Query: 1 MRGRGLNFEEIRDYRPGDDVREIDWKVTARLQKPHVRVFNEERDRQALLVVDQRLSMFFG 60 +RGRGL FEE+R Y PGDD+R +DW+VTAR KPHVRV++EE+DR LL+VDQR++MFFG Sbjct: 63 VRGRGLTFEELRGYLPGDDIRSMDWRVTARTGKPHVRVYSEEKDRPVLLLVDQRINMFFG 122 Query: 61 SRRAMKSVTAAETAAIGAWRVLGVGDRVGAIVFNDSDVVELAARRSRATVLQILSTIVAQ 120 SRRAMKSV AAE AA+ AWRVL GDRVG +VF D++ ELA RRSR V +L I Sbjct: 123 SRRAMKSVVAAEAAALAAWRVLSEGDRVGGLVFGDNECTELAPRRSRQAVEHLLGEIARH 182 Query: 121 NQALGVGRGLVPA---SGMLNRALERAERRTMHDATVILISDFDGADAATRRMIGAIARH 177 NQ+L R PA + LN ALERA R HD VI+ISDFDG DA TR ++ ++ Sbjct: 183 NQSL---RADAPARRGASQLNAALERAARLARHDHLVIVISDFDGHDATTRDLMLSMCAR 239 Query: 178 NNVVAVLVHDPLQSDLPASSRMTVTDGELQIQLEVGRESVRKSIAQASQERLRGVFAWTR 237 N+V+ +LV+DP +LP S + V+DGELQ++L G+ S RK IA + R + W R Sbjct: 240 NDVLTMLVYDPFLLELPDSGHLVVSDGELQVELGFGQASTRKGIADFVDTQSRSLMDWHR 299 Query: 238 ELGIPVLPLSTAEETAPQLRRLLG 261 +G+P+LPLS AEET QLRRLLG Sbjct: 300 AIGVPLLPLSAAEETPQQLRRLLG 323 >ref|YP_002540839.1| hypothetical protein Arad_7823 [Agrobacterium radiobacter K84] gb|ACM29244.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 311 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 135/260 (51%), Positives = 175/260 (67%) Query: 1 MRGRGLNFEEIRDYRPGDDVREIDWKVTARLQKPHVRVFNEERDRQALLVVDQRLSMFFG 60 MRGRGL FEE+RDY PGDD+R IDW+VTAR +KP VRV++EE++R A+L+VDQR++MFFG Sbjct: 42 MRGRGLTFEELRDYLPGDDIRSIDWRVTARTRKPAVRVYSEEKERPAILLVDQRINMFFG 101 Query: 61 SRRAMKSVTAAETAAIGAWRVLGVGDRVGAIVFNDSDVVELAARRSRATVLQILSTIVAQ 120 SR AMKSV AAE A + AWR+LG GDR+G VFND+ + E+ RSR V+ I Q Sbjct: 102 SRLAMKSVAAAEAAILCAWRILGSGDRIGGFVFNDTSIEEVKPHRSRNAVIAFAEKIAKQ 161 Query: 121 NQALGVGRGLVPASGMLNRALERAERRTMHDATVILISDFDGADAATRRMIGAIARHNNV 180 N +L P + L+ AL HD +I+ISDFDG A TR + +A N+V Sbjct: 162 NGSLRADAPTPPNTAQLDAALASVTSVAHHDHLLIIISDFDGHTAWTRDALLGLASCNDV 221 Query: 181 VAVLVHDPLQSDLPASSRMTVTDGELQIQLEVGRESVRKSIAQASQERLRGVFAWTRELG 240 + +LV+DP LP S + V+ G LQ QL R +VR +I ++ R R + AW RELG Sbjct: 222 ICLLVYDPFLLQLPTSGDIVVSGGGLQAQLAFKRSNVRSAIDNFARSRGRELRAWQRELG 281 Query: 241 IPVLPLSTAEETAPQLRRLL 260 +P+LP+S AEETAPQLRRLL Sbjct: 282 LPMLPVSAAEETAPQLRRLL 301