BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0048.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771372.1| phytoene synthase [Bradyrhizobium japonicum USD... 367 1e-99 ref|ZP_01047156.1| squalene/phytoene synthase [Nitrobacter sp. N... 348 5e-94 ref|YP_577076.1| squalene/phytoene synthase [Nitrobacter hamburg... 345 6e-93 ref|YP_318379.1| squalene/phytoene synthase [Nitrobacter winogra... 339 3e-91 ref|YP_001240348.1| putative phytoene synthase [Bradyrhizobium s... 325 4e-87 >ref|NP_771372.1| phytoene synthase [Bradyrhizobium japonicum USDA 110] dbj|BAC49997.1| bll4732 [Bradyrhizobium japonicum USDA 110] Length = 287 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 178/287 (62%), Positives = 216/287 (75%) Query: 1 MSATEAPKDGAAFCADLVRSHDFVRYASTLFLPGPERRAMLAIYAFNIEVSRVHEQVSQP 60 MS+ + D AFCADLVRSHDF RY +TLF P ERRA+LA+YAFN+E+ RV +QVSQP Sbjct: 1 MSSAASSPDSVAFCADLVRSHDFPRYVATLFAPAAERRALLALYAFNVEIVRVRDQVSQP 60 Query: 61 LPGEMRLQWWTDMLAGAGHGGVEGNPVAAELLHTIRNHRLPVSPFSLLVEEHQFDLYNDP 120 LPGE+RLQWWTDMLAG HG EGNPVAAELL IR+ LPV P SLL +EHQFDLYNDP Sbjct: 61 LPGEIRLQWWTDMLAGHVHGSAEGNPVAAELLRAIRDFDLPVEPLSLLADEHQFDLYNDP 120 Query: 121 MPSLTALEGYLDATASVLFSQATRVVARPSEAIDHLARHAGLAQGMAQVIASLGRDASRQ 180 MP++ ALEGYL AT+S LF A R++ PSEA++HLARHAGLAQG+ QVI +L RDA+ + Sbjct: 121 MPTMAALEGYLAATSSALFMLAARIMGPPSEAVEHLARHAGLAQGIVQVIVNLPRDAAHR 180 Query: 181 QLFLPLQLLQQPGGSKEEVFAGKMTPNIRAAIDQLADAAQGHLKTAFGLLADVPSGVRPI 240 QLFLP Q+L + E+VFA + TPN+ A ++QLA A+ H TA LLA PS VRP Sbjct: 181 QLFLPQQVLASHNCNMEDVFASRQTPNLHAVLEQLAGEARQHATTASSLLAQAPSSVRPA 240 Query: 241 FLPLACVRRELNRARREDYDPFLPKPVSRLRTLWTLWRAARTEEFGR 287 FLPL+ + +L R R +PF P+P SRLRTLWTLWRA+R+ EF + Sbjct: 241 FLPLSQAQADLKRLARPGRNPFAPQPSSRLRTLWTLWRASRSREFTK 287 >ref|ZP_01047156.1| squalene/phytoene synthase [Nitrobacter sp. Nb-311A] gb|EAQ34897.1| squalene/phytoene synthase [Nitrobacter sp. Nb-311A] Length = 295 Score = 348 bits (894), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 172/275 (62%), Positives = 209/275 (76%), Gaps = 1/275 (0%) Query: 11 AAFCADLVRSHDFVRYASTLFLPGPERRAMLAIYAFNIEVSRVHEQVSQPLPGEMRLQWW 70 AAFCA+LVR+HDF YA+TLF P RRA+LA+YAFN+E+ R+ EQ++QPLPGE+RLQWW Sbjct: 20 AAFCAELVRTHDFANYATTLFAPLRFRRALLALYAFNVEIVRIREQITQPLPGEIRLQWW 79 Query: 71 TDMLAGAGHGGVEGNPVAAELLHTIRNHRLPVSPFSLLVEEHQFDLYNDPMPSLTALEGY 130 DM+ GAG GGVEGNPVAAELL I+ H LPV S L+E HQFDLYNDPMP + A E Y Sbjct: 80 IDMIDGAGRGGVEGNPVAAELLLAIQEHGLPVELLSRLIEAHQFDLYNDPMPDMAAFERY 139 Query: 131 LDATASVLFSQATRVVARPSEAIDHLARHAGLAQGMAQVIASLGRDASRQQLFLPLQLLQ 190 L T+ LFS A+RVV + SE DHLARHAGLA G+AQ IA G DASR+Q ++PLQLL+ Sbjct: 140 LGDTSCALFSLASRVVGQRSEETDHLARHAGLAAGIAQTIAKFGFDASRRQSYVPLQLLE 199 Query: 191 QPGGSKEEVFAGKMTPNIRAAIDQLADAAQGHLKTAFGLLADVPSGVRPIFLPLACVRRE 250 Q E+VFAG+ T ++RAAI LAD A+ HL+ AFGLL D+P R ++LPLA VRR Sbjct: 200 QHSADLEQVFAGQDTSSVRAAIGGLADEARSHLEVAFGLLPDLPPQSRGVYLPLALVRRA 259 Query: 251 LNRARREDYDPFLPKPVSRLRTLWTLWRAARTEEF 285 LN A D +PF+P+PVSRLR LWT+WRA+RT F Sbjct: 260 LN-AGDTDINPFVPRPVSRLRILWTMWRASRTRPF 293 >ref|YP_577076.1| squalene/phytoene synthase [Nitrobacter hamburgensis X14] gb|ABE62616.1| Squalene/phytoene synthase [Nitrobacter hamburgensis X14] Length = 287 Score = 345 bits (884), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 171/285 (60%), Positives = 210/285 (73%) Query: 1 MSATEAPKDGAAFCADLVRSHDFVRYASTLFLPGPERRAMLAIYAFNIEVSRVHEQVSQP 60 MS + AAFCADLVR+HDF YA+TL P RRA+LA+YAFN+E+ RV EQ++QP Sbjct: 1 MSGAASENSSAAFCADLVRNHDFENYATTLLAPLRCRRALLALYAFNVEIVRVREQITQP 60 Query: 61 LPGEMRLQWWTDMLAGAGHGGVEGNPVAAELLHTIRNHRLPVSPFSLLVEEHQFDLYNDP 120 LPGE+RLQWW D+L GAGHGGVEGNPVAAELL IR+H LPV S L+E HQFDLYNDP Sbjct: 61 LPGEIRLQWWLDVLVGAGHGGVEGNPVAAELLLAIRDHGLPVERLSRLIEAHQFDLYNDP 120 Query: 121 MPSLTALEGYLDATASVLFSQATRVVARPSEAIDHLARHAGLAQGMAQVIASLGRDASRQ 180 MP L ALE YL T+ LFS A+ +V S+ DHLARHAGLA+G+AQVIA LG DASR+ Sbjct: 121 MPDLAALEQYLFDTSCALFSFASCIVGHQSDKTDHLARHAGLARGIAQVIAMLGFDASRR 180 Query: 181 QLFLPLQLLQQPGGSKEEVFAGKMTPNIRAAIDQLADAAQGHLKTAFGLLADVPSGVRPI 240 Q ++PLQL++Q G + E+VFAG+ TP +RAA+ LAD A+ HL A LL ++P R + Sbjct: 181 QSYVPLQLMEQHGSALEQVFAGRDTPPLRAALSGLADEARSHLDAALALLPELPPESRTV 240 Query: 241 FLPLACVRRELNRARREDYDPFLPKPVSRLRTLWTLWRAARTEEF 285 +LPLA VR L R + + DPF+P+ SRL LWTLWRA+RT F Sbjct: 241 YLPLALVRPALKRMAQANVDPFVPQAASRLHILWTLWRASRTTMF 285 >ref|YP_318379.1| squalene/phytoene synthase [Nitrobacter winogradskyi Nb-255] gb|ABA05027.1| squalene/phytoene synthase [Nitrobacter winogradskyi Nb-255] Length = 286 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 163/275 (59%), Positives = 209/275 (76%) Query: 11 AAFCADLVRSHDFVRYASTLFLPGPERRAMLAIYAFNIEVSRVHEQVSQPLPGEMRLQWW 70 AAFCA+LVR+HDF YA+TLF P RRA+LA+YAFN+E+ RV EQ++QPL GE+RLQWW Sbjct: 10 AAFCAELVRTHDFGNYATTLFAPLRSRRALLALYAFNVEIVRVREQITQPLAGEVRLQWW 69 Query: 71 TDMLAGAGHGGVEGNPVAAELLHTIRNHRLPVSPFSLLVEEHQFDLYNDPMPSLTALEGY 130 DMLAGAGHGGVEGNPVAAELL IR H LPV+ L+E HQFDLYNDPMP + ALE Y Sbjct: 70 MDMLAGAGHGGVEGNPVAAELLLAIREHDLPVALLQRLIEVHQFDLYNDPMPDIAALEQY 129 Query: 131 LDATASVLFSQATRVVARPSEAIDHLARHAGLAQGMAQVIASLGRDASRQQLFLPLQLLQ 190 L T+ LFS ++R + + + DHLARHAGLA GMA+VIA+ G ASR+Q ++PL+LL+ Sbjct: 130 LADTSCALFSLSSRTIGQRPDETDHLARHAGLACGMARVIANFGFYASRRQSYVPLKLLE 189 Query: 191 QPGGSKEEVFAGKMTPNIRAAIDQLADAAQGHLKTAFGLLADVPSGVRPIFLPLACVRRE 250 Q G E++F G+ P++RAAI LA+ A+ HLK A GLL+D+P R ++LPLA VRR Sbjct: 190 QHGVDLEQMFTGRDAPSVRAAIRGLAEEARSHLKVALGLLSDLPPDSRGVYLPLALVRRA 249 Query: 251 LNRARREDYDPFLPKPVSRLRTLWTLWRAARTEEF 285 L+ +PF+P+P+SRLR LWT+WRA+R++ F Sbjct: 250 LDDVGGAGINPFMPRPISRLRVLWTMWRASRSKAF 284 >ref|YP_001240348.1| putative phytoene synthase [Bradyrhizobium sp. BTAi1] gb|ABQ36442.1| putative phytoene synthase (terpenoid synthase) [Bradyrhizobium sp. BTAi1] Length = 288 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 170/286 (59%), Positives = 205/286 (71%), Gaps = 2/286 (0%) Query: 1 MSATEAPKDGAAFCADLVRSHDFVRYASTLFLPGPERRAMLAIYAFNIEVSRVHEQVSQP 60 MS T A D AAFCA LVR HDF RYASTLF+ RRA+L++YAFN+EV+R+ + VSQP Sbjct: 1 MSETSASTD-AAFCASLVREHDFDRYASTLFVAPEIRRALLSLYAFNVEVTRIRDVVSQP 59 Query: 61 LPGEMRLQWWTDMLAGAGHGGVEGNPVAAELLHTIRNHRLPVSPFSLLVEEHQFDLYNDP 120 LPGE+RLQWW D L G HGGVEGNPVAAELL T++ LPV + L++EHQFDLYNDP Sbjct: 60 LPGELRLQWWHDTLTGQEHGGVEGNPVAAELLLTVQRFALPVDRLTRLIDEHQFDLYNDP 119 Query: 121 MPSLTALEGYLDATASVLFSQATRVVARPSEAIDHLARHAGLAQGMAQVIASLGRDASRQ 180 MP++ AL+GYL T LF+ A R+V IDHLA HAGLAQG+ +IASL RDA+R+ Sbjct: 120 MPTMAALDGYLGDTRGALFALAARIVVGAVADIDHLAHHAGLAQGILHLIASLPRDAARR 179 Query: 181 QLFLPLQLLQQPGGSKEEVFAGKMTPNIRAAIDQLADAAQGHLKTAFGLLADVPSGVRPI 240 QLF+PL LL + G +E+VFA K TP IRA + +L A+ HL L + P GVRP+ Sbjct: 180 QLFIPLDLLARHGLGQEQVFAAKATPVIRAMLAELRGQARQHLDHTLELAREAPGGVRPV 239 Query: 241 FLPLACVRRELNRA-RREDYDPFLPKPVSRLRTLWTLWRAARTEEF 285 LPLA V R+L RA RR D DPF P+ SRL TLWTLWRAAR+ F Sbjct: 240 LLPLALVSRDLVRAERRIDADPFQPQLRSRLATLWTLWRAARSPAF 285