BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0047.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001240349.1| hypothetical protein BBta_4404 [Bradyrhizobi...   211   4e-53
ref|YP_001206010.1| hypothetical protein BRADO4033 [Bradyrhizobi...   210   5e-53
ref|NP_771373.1| hypothetical protein bll4733 [Bradyrhizobium ja...   210   6e-53
ref|NP_948172.1| hypothetical protein RPA2829 [Rhodopseudomonas ...   202   1e-50
ref|YP_004108990.1| hypothetical protein Rpdx1_2671 [Rhodopseudo...   201   2e-50

>ref|YP_001240349.1| hypothetical protein BBta_4404 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36443.1| hypothetical protein BBta_4404 [Bradyrhizobium sp. BTAi1]
          Length = 127

 Score =  211 bits (536), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 111/127 (87%)

Query: 1   MSNSSDAPHLPRSAPIEAYGKGGFAFADMSHRGSLLCLPDSIWAWPVTRPQEIDEYSLQK 60
           M+ S DAPH PRSA I+ YGKGGFAFADMSHRGSLLCLPDSIWAW VT+P +ID Y+LQ+
Sbjct: 1   MAASGDAPHFPRSASIDGYGKGGFAFADMSHRGSLLCLPDSIWAWDVTQPSQIDRYALQR 60

Query: 61  VFAAANAIDTLIVGTGTDVWVPPMGLREALRAVRVVLDPMQTGPAIRTYNIMLGERRRVA 120
           VF AAN IDTLIVGTGT+VW+PP  LR ALR V +VLD MQTGPAIRTYN+M+GERRRVA
Sbjct: 61  VFDAANKIDTLIVGTGTEVWIPPAPLRTALRGVGIVLDAMQTGPAIRTYNVMIGERRRVA 120

Query: 121 AALIAVP 127
           AALIAVP
Sbjct: 121 AALIAVP 127


>ref|YP_001206010.1| hypothetical protein BRADO4033 [Bradyrhizobium sp. ORS 278]
 emb|CAL77785.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 127

 Score =  210 bits (535), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 99/127 (77%), Positives = 110/127 (86%)

Query: 1   MSNSSDAPHLPRSAPIEAYGKGGFAFADMSHRGSLLCLPDSIWAWPVTRPQEIDEYSLQK 60
           M+ ++D PH PR API+ YGKGGFAFADMSHRGSLLCLPDSIWAW VT+P +ID YSLQ+
Sbjct: 1   MATANDTPHFPRFAPIDGYGKGGFAFADMSHRGSLLCLPDSIWAWDVTQPGQIDRYSLQR 60

Query: 61  VFAAANAIDTLIVGTGTDVWVPPMGLREALRAVRVVLDPMQTGPAIRTYNIMLGERRRVA 120
           VF AAN IDTLIVGTG +VW+PP  LR ALR V VVLD MQTGPAIRTYN+M+GERRRVA
Sbjct: 61  VFDAANKIDTLIVGTGNEVWIPPAALRSALRGVGVVLDAMQTGPAIRTYNVMIGERRRVA 120

Query: 121 AALIAVP 127
           AALIAVP
Sbjct: 121 AALIAVP 127


>ref|NP_771373.1| hypothetical protein bll4733 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49998.1| bll4733 [Bradyrhizobium japonicum USDA 110]
          Length = 127

 Score =  210 bits (535), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 113/127 (88%)

Query: 1   MSNSSDAPHLPRSAPIEAYGKGGFAFADMSHRGSLLCLPDSIWAWPVTRPQEIDEYSLQK 60
           M+   +APH PRSAPIEAYGKGGFAFA MSHRGSLLCLPD+IWAW VT P +ID YSL +
Sbjct: 1   MAGDPNAPHFPRSAPIEAYGKGGFAFAGMSHRGSLLCLPDAIWAWDVTDPAKIDRYSLDR 60

Query: 61  VFAAANAIDTLIVGTGTDVWVPPMGLREALRAVRVVLDPMQTGPAIRTYNIMLGERRRVA 120
           VFAAAN+IDTL++GTGT VW+PP  LR+AL+AVRVVLD MQTGPA+RTYNIM+GERRRVA
Sbjct: 61  VFAAANSIDTLLIGTGTGVWLPPPALRQALKAVRVVLDTMQTGPAVRTYNIMIGERRRVA 120

Query: 121 AALIAVP 127
           AALIAVP
Sbjct: 121 AALIAVP 127


>ref|NP_948172.1| hypothetical protein RPA2829 [Rhodopseudomonas palustris CGA009]
 ref|YP_001992149.1| hypothetical protein Rpal_3170 [Rhodopseudomonas palustris TIE-1]
 emb|CAE28271.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
 gb|ACF01674.1| protein of unknown function DUF498 [Rhodopseudomonas palustris
           TIE-1]
          Length = 127

 Score =  202 bits (514), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 95/127 (74%), Positives = 108/127 (85%)

Query: 1   MSNSSDAPHLPRSAPIEAYGKGGFAFADMSHRGSLLCLPDSIWAWPVTRPQEIDEYSLQK 60
           M+  S+ PH PR+A I+AYGKGGF FADMSH+GSLL LPD++W W VT+P++ID YSLQ+
Sbjct: 1   MAQRSEIPHFPRTAAIDAYGKGGFYFADMSHQGSLLFLPDAVWGWDVTKPEQIDRYSLQR 60

Query: 61  VFAAANAIDTLIVGTGTDVWVPPMGLREALRAVRVVLDPMQTGPAIRTYNIMLGERRRVA 120
           VF  ANAIDTLIVGTG DVW+ P  LREALR V VVLD MQTGPAIRTYNIM+GERRRVA
Sbjct: 61  VFDNANAIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTGPAIRTYNIMIGERRRVA 120

Query: 121 AALIAVP 127
           AALIAVP
Sbjct: 121 AALIAVP 127


>ref|YP_004108990.1| hypothetical protein Rpdx1_2671 [Rhodopseudomonas palustris DX-1]
 gb|ADU44257.1| protein of unknown function DUF498 [Rhodopseudomonas palustris
           DX-1]
          Length = 127

 Score =  201 bits (512), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/127 (74%), Positives = 107/127 (84%)

Query: 1   MSNSSDAPHLPRSAPIEAYGKGGFAFADMSHRGSLLCLPDSIWAWPVTRPQEIDEYSLQK 60
           M   ++ PH PRSA ++AYGKGGF FADMSH+GSLL LPD++W W VTRP++ID YSLQ+
Sbjct: 1   MGQRAEIPHFPRSAAVDAYGKGGFYFADMSHQGSLLFLPDAVWGWDVTRPEQIDRYSLQR 60

Query: 61  VFAAANAIDTLIVGTGTDVWVPPMGLREALRAVRVVLDPMQTGPAIRTYNIMLGERRRVA 120
           VF  ANAIDTLIVGTG DVW+ P  LREALR V VVLD MQTGPAIRTYNIM+GERRRVA
Sbjct: 61  VFDNANAIDTLIVGTGADVWIAPRQLREALRNVNVVLDTMQTGPAIRTYNIMIGERRRVA 120

Query: 121 AALIAVP 127
           AALIAVP
Sbjct: 121 AALIAVP 127