BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0043.p (327 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771377.1| hypothetical protein blr4737 [Bradyrhizobium ja... 508 e-142 ref|YP_001206015.1| putative ATPase family protein [Bradyrhizobi... 506 e-141 ref|YP_001240353.1| putative ATPase family protein [Bradyrhizobi... 490 e-136 ref|YP_577071.1| hypothetical protein Nham_1797 [Nitrobacter ham... 483 e-134 ref|ZP_01047161.1| hypothetical protein NB311A_05770 [Nitrobacte... 481 e-134 >ref|NP_771377.1| hypothetical protein blr4737 [Bradyrhizobium japonicum USDA 110] dbj|BAC50002.1| blr4737 [Bradyrhizobium japonicum USDA 110] Length = 334 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 257/335 (76%), Positives = 279/335 (83%), Gaps = 9/335 (2%) Query: 1 MPKKAKKTTSKATRKT---TPKAVAKRAENAATKRPVTAFDGAA----AERIANALEVIA 53 MPKK K+ + +T P VA + AA+K A AA ERI ALE IA Sbjct: 1 MPKKPSKSPAGKGPRTPARKPARVAAKRPTAASKAVSKAISKAAPDLNQERIVLALETIA 60 Query: 54 SRL-ADASPALDPAETFGAADAFVWHPDGRLAPVPRVSRVEISLLKGVDRMRDILMENTE 112 + L A PA +P E+F ADA+VWHPDGRL+ VPRVSRVE+ LLKGVDRMRDILMENTE Sbjct: 61 AHLSAQGKPAAEP-ESFDRADAYVWHPDGRLSAVPRVSRVELFLLKGVDRMRDILMENTE 119 Query: 113 RFANGLPANNALLWGARGMGKSSLVKAVHASINIDRRPADRLKLIEIHREDIESLPGLME 172 RFA GLPANNALLWGARGMGKSSLVKA HASIN DR+PAD+LKLIEIHREDIE+LP LME Sbjct: 120 RFAGGLPANNALLWGARGMGKSSLVKAAHASINADRKPADKLKLIEIHREDIETLPALME 179 Query: 173 LLRSSSFRFIVFCDDLSFDGNDASYKSLKAVLEGGIEGRPDNVILYATSNRRHLLAREMI 232 LR+SSFRFIVFCDDLSFDGNDASYKSLKAVLEGGIEGRP+NVILYATSNRRHLLAREMI Sbjct: 180 QLRASSFRFIVFCDDLSFDGNDASYKSLKAVLEGGIEGRPENVILYATSNRRHLLAREMI 239 Query: 233 ENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVKGYCDHYGIKIADGELER 292 ENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQDEYLAMV+GYC H+ IK+ D LER Sbjct: 240 ENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVRGYCSHFDIKVDDEALER 299 Query: 293 EALEWSTTRGSRSGRVAWQYTQELAGRLGVRLSGN 327 EALEWSTTRGSRSGRVAWQ+ QELAGRLGV+L+ Sbjct: 300 EALEWSTTRGSRSGRVAWQFVQELAGRLGVKLTAQ 334 >ref|YP_001206015.1| putative ATPase family protein [Bradyrhizobium sp. ORS 278] emb|CAL77790.1| putative ATPase family protein [Bradyrhizobium sp. ORS 278] Length = 306 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 245/298 (82%), Positives = 264/298 (88%) Query: 29 ATKRPVTAFDGAAAERIANALEVIASRLADASPALDPAETFGAADAFVWHPDGRLAPVPR 88 A KRP A ERIA ALE IA+ LA SP PA AADAFVWHPDGRL+ VPR Sbjct: 8 AAKRPARVPADDAPERIARALEAIAAHLAATSPRTTPALDLNAADAFVWHPDGRLSTVPR 67 Query: 89 VSRVEISLLKGVDRMRDILMENTERFANGLPANNALLWGARGMGKSSLVKAVHASINIDR 148 VSRVEI LLKG+DRMRDIL+ENTERFANGLPANNALLWGARGMGKSSLVKA HA+IN+ R Sbjct: 68 VSRVEIDLLKGIDRMRDILIENTERFANGLPANNALLWGARGMGKSSLVKAAHATINLAR 127 Query: 149 RPADRLKLIEIHREDIESLPGLMELLRSSSFRFIVFCDDLSFDGNDASYKSLKAVLEGGI 208 +PADRLKLIEIHREDIESLP LM++LR++ F FIVFCDDLSFDGNDASYKSLKAVLEGGI Sbjct: 128 KPADRLKLIEIHREDIESLPALMDILRAAPFHFIVFCDDLSFDGNDASYKSLKAVLEGGI 187 Query: 209 EGRPDNVILYATSNRRHLLAREMIENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQD 268 EGRP+NVILYATSNRRHLLAR+MIENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQD Sbjct: 188 EGRPENVILYATSNRRHLLARDMIENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQD 247 Query: 269 EYLAMVKGYCDHYGIKIADGELEREALEWSTTRGSRSGRVAWQYTQELAGRLGVRLSG 326 EYLAMV+GYC H+GI D ELER+ALEW+TTRGSRSGRVAWQ+TQ+LAGRLGVRLS Sbjct: 248 EYLAMVRGYCSHFGIAADDDELERDALEWATTRGSRSGRVAWQFTQDLAGRLGVRLSA 305 >ref|YP_001240353.1| putative ATPase family protein [Bradyrhizobium sp. BTAi1] gb|ABQ36447.1| putative ATPase family protein [Bradyrhizobium sp. BTAi1] Length = 306 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 245/303 (80%), Positives = 263/303 (86%) Query: 23 KRAENAATKRPVTAFDGAAAERIANALEVIASRLADASPALDPAETFGAADAFVWHPDGR 82 ++ A KRP ERIA ALE IA+ LA A PA AADAFVWHPDGR Sbjct: 2 QKPAKVAAKRPGGPAPADTRERIATALEAIAAHLAATRTAAAPALDLNAADAFVWHPDGR 61 Query: 83 LAPVPRVSRVEISLLKGVDRMRDILMENTERFANGLPANNALLWGARGMGKSSLVKAVHA 142 L+ VPRVSRVEI LLKG+DRMRDIL+ENTERFANGLPANNALLWGARGMGKSSLVKA HA Sbjct: 62 LSTVPRVSRVEIDLLKGIDRMRDILIENTERFANGLPANNALLWGARGMGKSSLVKAAHA 121 Query: 143 SINIDRRPADRLKLIEIHREDIESLPGLMELLRSSSFRFIVFCDDLSFDGNDASYKSLKA 202 SIN R+PADRLKLIEIHREDIESLP LM++LR++ F FIVFCDDLSFDGNDASYKSLKA Sbjct: 122 SINATRKPADRLKLIEIHREDIESLPALMDILRAAPFHFIVFCDDLSFDGNDASYKSLKA 181 Query: 203 VLEGGIEGRPDNVILYATSNRRHLLAREMIENERSTAINPGEAVEEKVSLSDRFGLWLGF 262 VLEGGIEGRP+NVILYATSNRRHLLAREMIENERSTAINPGEAVEEKVSLSDRFGLWLGF Sbjct: 182 VLEGGIEGRPENVILYATSNRRHLLAREMIENERSTAINPGEAVEEKVSLSDRFGLWLGF 241 Query: 263 HRCSQDEYLAMVKGYCDHYGIKIADGELEREALEWSTTRGSRSGRVAWQYTQELAGRLGV 322 HRCSQDEYLAMV+GYC H+ IK+ D LEREALEW+TTRGSRSGRVAWQ+TQ+LAGRLGV Sbjct: 242 HRCSQDEYLAMVRGYCSHFAIKVDDEALEREALEWATTRGSRSGRVAWQFTQDLAGRLGV 301 Query: 323 RLS 325 RLS Sbjct: 302 RLS 304 >ref|YP_577071.1| hypothetical protein Nham_1797 [Nitrobacter hamburgensis X14] gb|ABE62611.1| protein of unknown function DUF815 [Nitrobacter hamburgensis X14] Length = 320 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 249/319 (78%), Positives = 271/319 (84%), Gaps = 2/319 (0%) Query: 7 KTTSKATRKTTPKAVAKRAENAATKRPVTAFDGAAAERIANALEVIASRLADASPALDPA 66 K + KA +T P A + + ATK V+A AAAERIA ALEVIA+ ++ A+ D Sbjct: 3 KKSRKAGSRTAPGARSGNRGSGATKGLVSAAAPAAAERIARALEVIAAAMSSAAERPDNR 62 Query: 67 ETFGAADAFVWHPDGRLAPVPRVSRVEISLLKGVDRMRDILMENTERFANGLPANNALLW 126 ADAFVWHPDGRL PVP+VSRV++ LLKG+DRMRDIL+ENTERFA GLPANNALLW Sbjct: 63 AVLTRADAFVWHPDGRLMPVPQVSRVDLGLLKGIDRMRDILIENTERFAKGLPANNALLW 122 Query: 127 GARGMGKSSLVKAVHASINIDRRPADRLKLIEIHREDIESLPGLMELLRSSSFRFIVFCD 186 GARGMGKSSLVKA HAS+N +LKLIEIHREDIESLPGLMELLRSS F FIVFCD Sbjct: 123 GARGMGKSSLVKAAHASVNAA--VGGQLKLIEIHREDIESLPGLMELLRSSDFHFIVFCD 180 Query: 187 DLSFDGNDASYKSLKAVLEGGIEGRPDNVILYATSNRRHLLAREMIENERSTAINPGEAV 246 DLSFDGNDASYKSLKAVLEGGIEGRPDNVILYATSNRRHLLAREMIENERSTAINPGEAV Sbjct: 181 DLSFDGNDASYKSLKAVLEGGIEGRPDNVILYATSNRRHLLAREMIENERSTAINPGEAV 240 Query: 247 EEKVSLSDRFGLWLGFHRCSQDEYLAMVKGYCDHYGIKIADGELEREALEWSTTRGSRSG 306 EEKVSLSDRFGLWLGFHRCSQDEYLA+V+GYC H+GI + D ELEREALEWSTTRGSRSG Sbjct: 241 EEKVSLSDRFGLWLGFHRCSQDEYLAIVRGYCSHFGITLDDSELEREALEWSTTRGSRSG 300 Query: 307 RVAWQYTQELAGRLGVRLS 325 RVAWQ+TQELAGR GVRL+ Sbjct: 301 RVAWQFTQELAGRQGVRLA 319 >ref|ZP_01047161.1| hypothetical protein NB311A_05770 [Nitrobacter sp. Nb-311A] gb|EAQ34902.1| hypothetical protein NB311A_05770 [Nitrobacter sp. Nb-311A] Length = 292 Score = 481 bits (1239), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/285 (81%), Positives = 254/285 (89%), Gaps = 2/285 (0%) Query: 41 AAERIANALEVIASRLADASPALDPAETFGAADAFVWHPDGRLAPVPRVSRVEISLLKGV 100 AA+RIA ALEVIA+ + A D ADAF+WHPDGRL PV +VSRV++ LLKG+ Sbjct: 5 AADRIARALEVIAAAMTAADERTDSHVVMTRADAFIWHPDGRLMPVSQVSRVDLGLLKGI 64 Query: 101 DRMRDILMENTERFANGLPANNALLWGARGMGKSSLVKAVHASINIDRRPADRLKLIEIH 160 DRMRDILMENT RFA GLPANNALLWGARGMGKSSLVKA HA++N + +LKLIEIH Sbjct: 65 DRMRDILMENTVRFAKGLPANNALLWGARGMGKSSLVKAAHAAVNAE--VGGQLKLIEIH 122 Query: 161 REDIESLPGLMELLRSSSFRFIVFCDDLSFDGNDASYKSLKAVLEGGIEGRPDNVILYAT 220 REDIESLPGLMELLRSS FRFIVFCDDLSFDGNDASYKSLKAVLEGGIEGRPDNVILYAT Sbjct: 123 REDIESLPGLMELLRSSEFRFIVFCDDLSFDGNDASYKSLKAVLEGGIEGRPDNVILYAT 182 Query: 221 SNRRHLLAREMIENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVKGYCDH 280 SNRRHLLAR+MIENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQDEYLAMV+GYC + Sbjct: 183 SNRRHLLARDMIENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVRGYCSY 242 Query: 281 YGIKIADGELEREALEWSTTRGSRSGRVAWQYTQELAGRLGVRLS 325 +GI++ D ELEREALEWSTTRGSRSGRVAWQ+TQELAGRLGV+L+ Sbjct: 243 FGIRLDDAELEREALEWSTTRGSRSGRVAWQFTQELAGRLGVKLA 287