BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0034.p         (178 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771388.1| seryl-tRNA synthetase [Bradyrhizobium japonicum...   354   3e-96
ref|YP_001206021.1| seryl-tRNA synthetase [Bradyrhizobium sp. OR...   347   6e-94
ref|YP_577065.1| seryl-tRNA synthetase [Nitrobacter hamburgensis...   346   7e-94
ref|YP_001240359.1| seryl-tRNA synthetase [Bradyrhizobium sp. BT...   346   8e-94
ref|YP_318389.1| seryl-tRNA synthetase [Nitrobacter winogradskyi...   345   2e-93

>ref|NP_771388.1| seryl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 sp|Q89L00.1|SYS_BRAJA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 dbj|BAC50013.1| seryl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 443

 Score =  354 bits (909), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 167/174 (95%), Positives = 170/174 (97%)

Query: 1   MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDELERMLSCAEQVLQ 60
           MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPE SKDELERMLSCAEQVLQ
Sbjct: 267 MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEASKDELERMLSCAEQVLQ 326

Query: 61  KLDLHYRVMTLCAGDMGFSAQKTYDIEVWMPGQGDGGAYREISSCSVCGDFQARRMDARY 120
           KLDLHYRVMTLCAGDMGFS+QKTYDIEVWMPGQGDGG +REISSCSVCGDFQARRMDAR 
Sbjct: 327 KLDLHYRVMTLCAGDMGFSSQKTYDIEVWMPGQGDGGMFREISSCSVCGDFQARRMDARS 386

Query: 121 RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQQDGSIAVPDVLQPYMGGLKVI 174
           RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQ+DGSIAVP VLQPYMGGLKVI
Sbjct: 387 RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQEDGSIAVPSVLQPYMGGLKVI 440


>ref|YP_001206021.1| seryl-tRNA synthetase [Bradyrhizobium sp. ORS 278]
 sp|A4YV70.1|SYS_BRASO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 emb|CAL77796.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [Bradyrhizobium sp. ORS
           278]
          Length = 442

 Score =  347 bits (889), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 161/174 (92%), Positives = 169/174 (97%)

Query: 1   MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDELERMLSCAEQVLQ 60
           MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDE ERML+CAE+VL+
Sbjct: 265 MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDEHERMLACAEEVLR 324

Query: 61  KLDLHYRVMTLCAGDMGFSAQKTYDIEVWMPGQGDGGAYREISSCSVCGDFQARRMDARY 120
           +LDLHYRV+TLC GDMGFS+QKTYDIEVWMPGQGDGGA+REISSCSVCGDFQARRMDARY
Sbjct: 325 RLDLHYRVITLCTGDMGFSSQKTYDIEVWMPGQGDGGAFREISSCSVCGDFQARRMDARY 384

Query: 121 RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQQDGSIAVPDVLQPYMGGLKVI 174
           R  DGKPRFVHTLNGSGTAVGRALIAVMETYQQ DGSIAVPDVLQPYMGGLKV+
Sbjct: 385 RASDGKPRFVHTLNGSGTAVGRALIAVMETYQQADGSIAVPDVLQPYMGGLKVV 438


>ref|YP_577065.1| seryl-tRNA synthetase [Nitrobacter hamburgensis X14]
 sp|Q1QME2.1|SYS_NITHX RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gb|ABE62605.1| seryl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 470

 Score =  346 bits (888), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 162/178 (91%), Positives = 170/178 (95%)

Query: 1   MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDELERMLSCAEQVLQ 60
           +R TALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDE ERMLSCAE+VL+
Sbjct: 293 LRFTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDEHERMLSCAEEVLR 352

Query: 61  KLDLHYRVMTLCAGDMGFSAQKTYDIEVWMPGQGDGGAYREISSCSVCGDFQARRMDARY 120
           +LDLHYRVMTLC GDMGF++QKTYDIEVWMPGQG+GGAYREISSCSVCGDFQARRMDAR 
Sbjct: 353 RLDLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARS 412

Query: 121 RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQQDGSIAVPDVLQPYMGGLKVIEHGM 178
           RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQ DGSIAVPDVL PYMGGLKVI  G+
Sbjct: 413 RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQADGSIAVPDVLLPYMGGLKVIAKGL 470


>ref|YP_001240359.1| seryl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 sp|A5EJV9.1|SYS_BRASB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gb|ABQ36453.1| seryl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 442

 Score =  346 bits (888), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 161/174 (92%), Positives = 169/174 (97%)

Query: 1   MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDELERMLSCAEQVLQ 60
           MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDE ERML+CAE+VL+
Sbjct: 265 MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDEHERMLACAEEVLR 324

Query: 61  KLDLHYRVMTLCAGDMGFSAQKTYDIEVWMPGQGDGGAYREISSCSVCGDFQARRMDARY 120
           +LDLHYRV+TLC GDMGFS+QKTYDIEVWMPGQGDGGA+REISSCSVCGDFQARRMDARY
Sbjct: 325 RLDLHYRVITLCTGDMGFSSQKTYDIEVWMPGQGDGGAFREISSCSVCGDFQARRMDARY 384

Query: 121 RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQQDGSIAVPDVLQPYMGGLKVI 174
           R  DGKPRFVHTLNGSGTAVGRALIAVMETYQQ DGSIAVPDVLQPYMGGLKV+
Sbjct: 385 RASDGKPRFVHTLNGSGTAVGRALIAVMETYQQADGSIAVPDVLQPYMGGLKVV 438


>ref|YP_318389.1| seryl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gb|ABA05037.1| seryl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 497

 Score =  345 bits (884), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 162/178 (91%), Positives = 169/178 (94%)

Query: 1   MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDELERMLSCAEQVLQ 60
           +R TALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDE ERMLSCAE+VL+
Sbjct: 320 LRFTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDEHERMLSCAEEVLR 379

Query: 61  KLDLHYRVMTLCAGDMGFSAQKTYDIEVWMPGQGDGGAYREISSCSVCGDFQARRMDARY 120
           +LDLHYRVMTLC GDMGF++QKTYDIEVWMPGQG+GGAYREISSCSVCGDFQARRMDARY
Sbjct: 380 RLDLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARY 439

Query: 121 RGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQQDGSIAVPDVLQPYMGGLKVIEHGM 178
           R  DGKPRFVHTLNGSGTAVGRALIAVMETYQQ DGSIAVPDVLQPYMGGLKVI   M
Sbjct: 440 RSSDGKPRFVHTLNGSGTAVGRALIAVMETYQQADGSIAVPDVLQPYMGGLKVIAKDM 497