BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0027.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240364.1| condensin subunit ScpA [Bradyrhizobium sp. B... 466 e-129 ref|YP_001206026.1| hypothetical protein BRADO4049 [Bradyrhizobi... 465 e-129 ref|NP_771393.1| hypothetical protein bll4753 [Bradyrhizobium ja... 461 e-128 ref|YP_781611.1| chromosome segregation and condensation protein... 446 e-123 ref|YP_318417.1| chromosome segregation and condensation protein... 444 e-123 >ref|YP_001240364.1| condensin subunit ScpA [Bradyrhizobium sp. BTAi1] gb|ABQ36458.1| condensin subunit ScpA [Bradyrhizobium sp. BTAi1] Length = 279 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/279 (83%), Positives = 256/279 (91%), Gaps = 6/279 (2%) Query: 1 MTAEILSFDTGRPA-DLAEGEPALVVDVEGYEGPLDLLLTLARQQKVDLSKISILALADQ 59 MTAEILSF+TGRP +LAE EPALVVDVEGYEGPLDLLL LARQQKVDL+KISILALADQ Sbjct: 1 MTAEILSFETGRPTTELAEAEPALVVDVEGYEGPLDLLLALARQQKVDLAKISILALADQ 60 Query: 60 YLSFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRLRRL 119 YL FIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPP+ EGPSAEEMATALANRLRRL Sbjct: 61 YLQFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPAQEGPSAEEMATALANRLRRL 120 Query: 120 EAIREAANRLMNRPQFQRDIFPRGNPESIAEIKHPKFTATLYDLLSAYATQRQSRVLTTV 179 EAIREAANRLMNRPQFQRD+FPRGNPE IAE++ PKFTATL+DLLSAYA QRQ+RV+T+V Sbjct: 121 EAIREAANRLMNRPQFQRDVFPRGNPEEIAEVRRPKFTATLFDLLSAYAIQRQARVVTSV 180 Query: 180 HLQKRTVWSLAEARASLERLVGIAE---DWSCLDEYLMNYVADPTQKATVFASSFAAALE 236 H+ KRTVWSLAEARA+LERLVG+ E DW CLD+YL++YVA+PTQKATVFASSFAA LE Sbjct: 181 HMAKRTVWSLAEARATLERLVGMTEVSDDWGCLDDYLLDYVAEPTQKATVFASSFAAVLE 240 Query: 237 LVREGEMEINQKQAFAPIYFRKRQAQ--AATAAPDLSVE 273 LVREG++E+NQKQAFAP+YFRKR A AAPDL+VE Sbjct: 241 LVREGKLELNQKQAFAPLYFRKRPPNQPGAMAAPDLTVE 279 >ref|YP_001206026.1| hypothetical protein BRADO4049 [Bradyrhizobium sp. ORS 278] emb|CAL77801.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 279 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 232/279 (83%), Positives = 256/279 (91%), Gaps = 6/279 (2%) Query: 1 MTAEILSFDTGRPA-DLAEGEPALVVDVEGYEGPLDLLLTLARQQKVDLSKISILALADQ 59 MTAEILSF+TGRP +LAE EPALVVDVEGYEGPLDLLL LARQQKVDL+KISILALADQ Sbjct: 1 MTAEILSFETGRPTTELAEAEPALVVDVEGYEGPLDLLLALARQQKVDLAKISILALADQ 60 Query: 60 YLSFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRLRRL 119 YL FIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPP+ EGPSAEEMATALANRLRRL Sbjct: 61 YLQFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPAQEGPSAEEMATALANRLRRL 120 Query: 120 EAIREAANRLMNRPQFQRDIFPRGNPESIAEIKHPKFTATLYDLLSAYATQRQSRVLTTV 179 EAIREAANRLMNRPQFQRD+FPRGNPE+IAE++ PKFTATL+DLLSAYA QRQ+RV+T+V Sbjct: 121 EAIREAANRLMNRPQFQRDVFPRGNPEAIAEVRKPKFTATLFDLLSAYAIQRQARVVTSV 180 Query: 180 HLQKRTVWSLAEARASLERLVGIAE---DWSCLDEYLMNYVADPTQKATVFASSFAAALE 236 H+ KRTVWSLAEARA+LERLVG+ E DW CLD+YL++YV +PTQKATVFASSFAA LE Sbjct: 181 HMAKRTVWSLAEARATLERLVGMTEVSDDWGCLDDYLLSYVPEPTQKATVFASSFAAVLE 240 Query: 237 LVREGEMEINQKQAFAPIYFRKRQAQ--AATAAPDLSVE 273 LVREG++E+NQKQAFAP+YFRKR A AAPDL+VE Sbjct: 241 LVREGKLELNQKQAFAPLYFRKRPPNQPGAMAAPDLTVE 279 >ref|NP_771393.1| hypothetical protein bll4753 [Bradyrhizobium japonicum USDA 110] dbj|BAC50018.1| bll4753 [Bradyrhizobium japonicum USDA 110] Length = 279 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 230/261 (88%), Positives = 248/261 (95%), Gaps = 3/261 (1%) Query: 1 MTAEILSFDTGRPADLAEGEPALVVDVEGYEGPLDLLLTLARQQKVDLSKISILALADQY 60 MTAEILSF+TGRPA+LAEGEPALVVDVEGYEGPLDLLL LARQQKVDL+KISILALADQY Sbjct: 1 MTAEILSFETGRPAELAEGEPALVVDVEGYEGPLDLLLALARQQKVDLAKISILALADQY 60 Query: 61 LSFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRLRRLE 120 L FIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRLRRLE Sbjct: 61 LHFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRLRRLE 120 Query: 121 AIREAANRLMNRPQFQRDIFPRGNPESIAEIKHPKFTATLYDLLSAYATQRQSRVLTTVH 180 AIREAANRLMNRPQ QRDIFPRG PE IAEIKHPK+TATLYDLL+AYA+QRQSRVL +VH Sbjct: 121 AIREAANRLMNRPQLQRDIFPRGEPEQIAEIKHPKYTATLYDLLTAYASQRQSRVLASVH 180 Query: 181 LQKRTVWSLAEARASLERLVG-IAE--DWSCLDEYLMNYVADPTQKATVFASSFAAALEL 237 L KRTVWSLAEARA+LERLVG I+E DW LD++L+ +VADPTQ+ATVFASSFAAALEL Sbjct: 181 LAKRTVWSLAEARATLERLVGSISEQDDWGVLDDFLIRHVADPTQRATVFASSFAAALEL 240 Query: 238 VREGEMEINQKQAFAPIYFRK 258 VREG++E+NQK+AFAPIYFRK Sbjct: 241 VREGQLELNQKEAFAPIYFRK 261 >ref|YP_781611.1| chromosome segregation and condensation protein ScpA [Rhodopseudomonas palustris BisA53] gb|ABJ06631.1| condensin subunit ScpA [Rhodopseudomonas palustris BisA53] Length = 279 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 226/279 (81%), Positives = 248/279 (88%), Gaps = 6/279 (2%) Query: 1 MTAEILSFDTGRPAD----LAEGEPALVVDVEGYEGPLDLLLTLARQQKVDLSKISILAL 56 M+AEILSF+TGRPA+ L + EPALV+DVEGYEGPLDLLL LARQQKVDL KISILAL Sbjct: 1 MSAEILSFETGRPAEIVAELGDDEPALVIDVEGYEGPLDLLLALARQQKVDLHKISILAL 60 Query: 57 ADQYLSFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRL 116 ADQYL FIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRL Sbjct: 61 ADQYLVFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRL 120 Query: 117 RRLEAIREAANRLMNRPQFQRDIFPRGNPESIAEIKHPKFTATLYDLLSAYATQRQSRVL 176 R+LEAIREAANRLM RPQ RDIF RG PE+IAEIKHP+FTATLYDLLSAYA QRQ V+ Sbjct: 121 RQLEAIREAANRLMTRPQLARDIFARGAPENIAEIKHPRFTATLYDLLSAYAVQRQRTVI 180 Query: 177 TTVHLQKRTVWSLAEARASLERLVGIAEDWSCLDEYLMNYVADPTQKATVFASSFAAALE 236 VHL +RTVWSLAEARAS+ERL+G AEDWS LD YL+ YV DP+QKATVFASSFAAALE Sbjct: 181 AKVHLARRTVWSLAEARASIERLIGGAEDWSRLDSYLLEYVVDPSQKATVFASSFAAALE 240 Query: 237 LVREGEMEINQKQAFAPIYFRKRQAQAAT--AAPDLSVE 273 LVREG++E++Q +AFAP+YFR+R AQ+A A PDLSVE Sbjct: 241 LVREGQLELHQSEAFAPLYFRRRPAQSAEALAEPDLSVE 279 >ref|YP_318417.1| chromosome segregation and condensation protein ScpA [Nitrobacter winogradskyi Nb-255] gb|ABA05065.1| condensin subunit ScpA [Nitrobacter winogradskyi Nb-255] Length = 278 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 224/278 (80%), Positives = 246/278 (88%), Gaps = 5/278 (1%) Query: 1 MTAEILSFDTGRPAD-LAEGEPALVVDVEGYEGPLDLLLTLARQQKVDLSKISILALADQ 59 M+AEILSF+TGRP + + E ALVVDVEGYEGPLDLLL LARQQKVDLSKISILALADQ Sbjct: 1 MSAEILSFETGRPTERVVADEVALVVDVEGYEGPLDLLLALARQQKVDLSKISILALADQ 60 Query: 60 YLSFIEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPSAEGPSAEEMATALANRLRRL 119 YL F+EAARKIRLELAADYLVMAAWLAFLKSRLLLPEPP+ +GPSA EMA ALANRLRRL Sbjct: 61 YLVFVEAARKIRLELAADYLVMAAWLAFLKSRLLLPEPPTPDGPSAGEMAAALANRLRRL 120 Query: 120 EAIREAANRLMNRPQFQRDIFPRGNPESIAEIKHPKFTATLYDLLSAYATQRQSRVLTTV 179 EAIREA+NRLMNR Q RDIFPRGNPESIAEI+HPKFTATL+DLLSAYA QRQ RVLTTV Sbjct: 121 EAIREASNRLMNRQQLGRDIFPRGNPESIAEIRHPKFTATLFDLLSAYAVQRQQRVLTTV 180 Query: 180 HLQKRTVWSLAEARASLERLVGIA-EDWSCLDEYLMNYVADPTQKATVFASSFAAALELV 238 H+ KRTVWSL+EARASLERLVG+A EDW CLDEYLM +V DP Q+ATVFASSFA+ALELV Sbjct: 181 HMAKRTVWSLSEARASLERLVGLAGEDWGCLDEYLMTFVVDPAQRATVFASSFASALELV 240 Query: 239 REGEMEINQKQAFAPIYFRKRQAQAA---TAAPDLSVE 273 REG M++NQK+AFAP+YFRKR Q + TA PD V+ Sbjct: 241 REGVMDLNQKEAFAPLYFRKRAPQPSPDPTAGPDTPVQ 278