BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0024.p (488 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771395.1| hypothetical protein bll4755 [Bradyrhizobium ja... 410 e-112 ref|YP_577033.1| sporulation related [Nitrobacter hamburgensis X... 337 2e-90 ref|YP_781609.1| sporulation domain-containing protein [Rhodopse... 325 8e-87 ref|YP_001992171.1| Sporulation domain-containing protein [Rhodo... 319 5e-85 ref|YP_004108970.1| Sporulation domain-containing protein [Rhodo... 318 2e-84 >ref|NP_771395.1| hypothetical protein bll4755 [Bradyrhizobium japonicum USDA 110] dbj|BAC50020.1| bll4755 [Bradyrhizobium japonicum USDA 110] Length = 540 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 280/539 (51%), Positives = 339/539 (62%), Gaps = 67/539 (12%) Query: 1 MADRYQDRHFPADT-------ASKADSDPLAELARLIGQTDPFGS---------ANKPPP 44 MA+RYQDR FP+D KA++DPLAELARLIGQTDPF + A P Sbjct: 18 MAERYQDRPFPSDDYGRGGDQHGKAENDPLAELARLIGQTDPFAAQGRPTARPPAAPAPA 77 Query: 45 RPLQSRANARPQQYEPQAADEDAPPAGPPTWMQRARQEAVAPPPVQHTEDEEPEQDY--Q 102 Q + + AA + P GPP+WM+RA VQ PE DY Sbjct: 78 HSYQEDDYRQDDDQQDYAAQAPSAPPGPPSWMRRAN--------VQPQPAPAPEPDYPVS 129 Query: 103 PKPVHPLHRYAAQQAQPAPAPVAQYRPVEAPRQPEAFDEEPHYQGGGQSQ---------- 152 PVHPLHRY+AQ P P + +A Q A+ ++PH Q Sbjct: 130 VNPVHPLHRYSAQPTAPEP----DFHQPQA-YQDHAYQDQPHQAPAYQQDQAYQQEQAYQ 184 Query: 153 ------DPSRYDDALYGQLEAGEQDLQRDPAYPDDPYAYEEAYEEEP--EPRRRRSGLIT 204 DPSRYDDALYG+LEAGEQD QRDPAYPDDPYA++ Y E EP+++R G++T Sbjct: 185 EPYAQPDPSRYDDALYGKLEAGEQDYQRDPAYPDDPYAFQSDYPEADLDEPKKQRGGMMT 244 Query: 205 VAAVLALGVFGVGGAYAYRTYVGSPRSGEPPIIKADNTPTKVIPAQADAPAKTPDRMATG 264 VAA+LAL V G G A+AY+TYVGSPRSGEPPIIKADNTPTK++PA D+ AK PDRM +G Sbjct: 245 VAAILALAVVGTGAAFAYKTYVGSPRSGEPPIIKADNTPTKIVPAPTDSSAKVPDRMVSG 304 Query: 265 DGTEKIVSREETPVDVNSKTAGPRVVFPPLNANANPPPAASVQTAQ---PAPAPVTANGT 321 DG EKIV REE PVDVN+K GPRVVFPPLN NANPPP ASV + P+ P+ +NGT Sbjct: 305 DGAEKIVPREEAPVDVNAKAGGPRVVFPPLNPNANPPPVASVSPSTIPPPSAGPIPSNGT 364 Query: 322 LPNNEPRKVRTLSVKGDTPDGT---QATATVPAKPPA-AAKPPVSRGNPAAANASVNSPM 377 LPNN PR +RT++V+GD D A A A PP A PP R P +ANAS N P+ Sbjct: 365 LPNNSPRTIRTVAVRGDQTDSATPQSAAAAKSATPPKPVAAPPGPRTPPTSANASANQPL 424 Query: 378 SLVPGQAEAAPAA-PPTRVASTSAAPV-----GGGGYLVQVSSQKNEADAQASYRTLQGK 431 SL P ++APAA PP R+A+T+ + GG GY+VQVSSQ++E A ASYR LQ K Sbjct: 425 SLAP---QSAPAAEPPQRMAATNPTQIAPASSGGSGYIVQVSSQQSEDSAAASYRVLQSK 481 Query: 432 YRSVLGSQPLVVKRVDLGE--KGVYYRAFAGPFASSEEASQVCKSLMSAGGPQCLIQRN 488 Y SVLGS+ V+KRVDL + KG+ YRAFAGP+ S+EEA+Q C SL SAG C +QRN Sbjct: 482 YGSVLGSRSPVIKRVDLTDKGKGIVYRAFAGPYGSAEEATQACNSLKSAGLSACFVQRN 540 >ref|YP_577033.1| sporulation related [Nitrobacter hamburgensis X14] gb|ABE62573.1| Sporulation related protein [Nitrobacter hamburgensis X14] Length = 481 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 256/526 (48%), Positives = 309/526 (58%), Gaps = 83/526 (15%) Query: 1 MADRYQDRHFP---------ADTASKADSDPLAELARLIGQTDPFGSANKPPPRPLQSRA 51 MA RY DR FP ++A+ DPLAELARLIGQTDPFG + P A Sbjct: 1 MAHRYHDRPFPEDDDYGRDDRRATAQAEPDPLAELARLIGQTDPFGDIKRSAP---TVPA 57 Query: 52 NARPQQYEPQAADEDAPPAGPPTWMQRARQEAVAPPPVQHTEDEEPEQDYQPKPVHPLHR 111 + +EP ED PA PP+W+QR +A P +P QD + P HP+ R Sbjct: 58 DDPVDHFEPLPPIEDDAPASPPSWIQRR----MAQP--------DPPQDVEAAP-HPVLR 104 Query: 112 YAAQQAQPAPAPVAQYRPVEAPRQPEAFDEEPHYQGGGQSQDPSRYDDALYGQL------ 165 AA P P Q+ +PE++ + DP RYDD LYG+L Sbjct: 105 RAA--VYPDDQPHVQHP------EPESYPQA----------DPDRYDDVLYGRLPDEQRA 146 Query: 166 ---------EAGEQDLQRDPAYPDDPYAYEEAYEEE---PEPRRRRSGLITVAAVLALGV 213 EA E R+ Y + P+ Y++ Y EE P PRRR + TV AVLAL V Sbjct: 147 YAYEDRVPREAYEDQFPRE-TYSEAPFGYQDGYGEEGEEPAPRRR-GRMATVVAVLALAV 204 Query: 214 FGVGGAYAYRTYVGSPRSGEPPIIKADNTPTKVIPAQA---DAPAK-TPDRMATGDGTEK 269 G G AYAYRTYVG+ RSG PP+I+AD P K++P QA DA K DRM+T +GTE+ Sbjct: 205 LGTGAAYAYRTYVGTSRSGAPPVIRADAEPNKIVPQQAISGDAVGKLIQDRMSTENGTEQ 264 Query: 270 IVSREETPVDVN-SKTAGPRVVFPPLNANANPPPAASVQTAQPAPAPVTANGTLPNNEPR 328 +VSREE PVDV + T+GPRVVFPPLN NANPP AASV PA V ANGTL +EPR Sbjct: 265 MVSREEQPVDVKEATTSGPRVVFPPLNQNANPPAAASVAPNIRPPATV-ANGTLAGDEPR 323 Query: 329 KVRTLSVKGDTPDGTQATATVPAKPPAAAKPPVSRGNPAAANASVNSPMSLVP-GQAEAA 387 +VRTL+V+GD D A ATV AA AA N+P+SL P G AE+ Sbjct: 324 RVRTLTVRGDQAD--VAAATVARHESQAAPAATRHAPAVAAAPGANAPLSLSPQGAAESR 381 Query: 388 PAAPPTRVASTSA-----APVGGGGYLVQVSSQKNEADAQASYRTLQGKYRSVLGSQPLV 442 TR+AST+ A V GGYLVQV+SQ+NEADAQAS+R LQGK+ SVLGS+ L+ Sbjct: 382 -----TRMASTNPGQQAPAAVSTGGYLVQVASQRNEADAQASFRVLQGKFPSVLGSRTLL 436 Query: 443 VKRVDLGEKGVYYRAFAGPFASSEEASQVCKSLMSAGGPQCLIQRN 488 VKR DLG KGVYYRA GPF SSEEAS+VC SL SAGG QC++QRN Sbjct: 437 VKRADLGAKGVYYRAMVGPFGSSEEASRVCGSLKSAGG-QCVVQRN 481 >ref|YP_781609.1| sporulation domain-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ06629.1| Sporulation domain protein [Rhodopseudomonas palustris BisA53] Length = 463 Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 238/513 (46%), Positives = 301/513 (58%), Gaps = 75/513 (14%) Query: 1 MADRYQDRHFPAD---------TASKADSDPLAELARLIGQTDPFGSANKPPPRPLQSRA 51 MA+RYQDR FPAD ++A++DPLAELARLIGQTDPF S ++ P A Sbjct: 1 MAERYQDRPFPADDRYGRGNQAAPTQAETDPLAELARLIGQTDPFASQSRAPAPQPAPPA 60 Query: 52 NARPQQYEPQAADEDAPPAGPPTWMQ-RARQEAVAPPPVQHTEDEEPEQDYQPKPVHPLH 110 + +P A ++DAPP P W++ R R A + EP D QP P Sbjct: 61 DPYSIPTQP-AYEDDAPPM--PAWLKNRGRDTAFR----HDSPQAEPHYDPQPDPY---- 109 Query: 111 RYAAQQAQPAPAPVAQYRPVEAPRQPEAFDEEPHYQGGG-QSQDPSRYDDALYGQLEAGE 169 YAA P + +EP + Q D RYDDALYGQ+E Sbjct: 110 -YAAP--------------------PTSHRQEPGFAAATTQPTDLGRYDDALYGQIEPSR 148 Query: 170 QDL---QRDPAYPDDPYAYEEAYEEEPEPRRRRSGLITVAAVLALGVFGVGGAYAYRTYV 226 + Q YPD P AY +EPE +RR G++T+ AVLAL V G GGA+AYRT++ Sbjct: 149 DYIDPSQETAGYPD-PQAYGYDGYDEPEQPKRRGGMMTIVAVLALAVVGTGGAFAYRTFM 207 Query: 227 GSPRSGEPPIIKADNTPTKVIP-AQADAPAKTPDRMATGDGTEKIVSREETPVDVNSKTA 285 +PRS EPPIIKAD +PTKV+P + ADA DR+A+G+G E ++SREE P D + Sbjct: 208 AAPRSSEPPIIKADPSPTKVVPPSAADASKPIQDRLASGNGAEALISREEQPQDPSKY-- 265 Query: 286 GPRVVFPPLNANANPPPAASVQTAQPAPAPVTANGTLPN-NEPRKVRTLSVKGDTPDGTQ 344 G RVV PPL NANPP +SV APA G P+ +EPR+++TL+V+ D D Sbjct: 266 GSRVVLPPLAQNANPPTPSSV-----APANKPLAGPPPSGDEPRRIKTLAVRPDQADAAA 320 Query: 345 ATATVPAK----PPAAAK---PPVSRGNPAAANASVNSPMSLVPGQAEAAPAAPPTRVAS 397 A PA+ PPAA + PPV+ A ++ N+P+SL P AE P TR+A+ Sbjct: 321 TPANRPAQRPATPPAATRSPPPPVA----NANASTANAPLSLSPQAAE-----PRTRMAA 371 Query: 398 T--SAAPVGGGGYLVQVSSQKNEADAQASYRTLQGKYRSVLGSQPLVVKRVDLGEKGVYY 455 T SA P GGYLVQVSSQ+NE+DAQASYR LQGK+ SVLGS+ ++KR DLG KGVYY Sbjct: 372 TAPSAQPASSGGYLVQVSSQRNESDAQASYRALQGKFPSVLGSRAPLIKRADLGGKGVYY 431 Query: 456 RAFAGPFASSEEASQVCKSLMSAGGPQCLIQRN 488 RA GPF S EEASQ C +L SAGG QC++QRN Sbjct: 432 RAMVGPFGSPEEASQFCGNLKSAGG-QCVVQRN 463 >ref|YP_001992171.1| Sporulation domain-containing protein [Rhodopseudomonas palustris TIE-1] gb|ACF01696.1| Sporulation domain protein [Rhodopseudomonas palustris TIE-1] Length = 545 Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 249/554 (44%), Positives = 311/554 (56%), Gaps = 81/554 (14%) Query: 1 MADRYQDRHFPADTAS---------KADSDPLAELARLIGQTDPFGSANKPPPRPLQSRA 51 M DRYQ R FP D K ++DPLAELARLIGQTDPFG A Sbjct: 7 MTDRYQSRPFPLDDDDSRASSRYPQKPENDPLAELARLIGQTDPFGQAAPRAEPAPPVAP 66 Query: 52 NARPQQYE------PQAADEDAPPAGPPTWMQRARQEAVAPPPVQHTEDEE--PEQDYQP 103 R + PQA DE +PP P+WMQ RQ A AP P Q T++ PE D+ Sbjct: 67 QTRSTDFRASRPVPPQAEDESSPPM--PSWMQH-RQTARAPEP-QRTQEPTFAPEPDFSR 122 Query: 104 KPVH----PLHRYAAQQAQPAPA---PV----AQYRPVEAPR------------------ 134 P P R A + APA P+ Q RP+E P Sbjct: 123 PPSFINAAPPRRAQAPSFERAPAIQPPIDPNPLQMRPLEQPAMDLRSLDPRFDPAPPEQR 182 Query: 135 -----QPEAFDEEPHYQGG-GQSQDPSRYDDALYGQLEAGEQDLQRDPA----YPDDPYA 184 QP+ EP ++ S +P RYD+ALYGQL A DPA Y + PY Sbjct: 183 QLDLPQPDRVHYEPPFEPLPATSLEPDRYDEALYGQLPA-------DPAPVGGYQESPYG 235 Query: 185 YEEAYEEEPEPRR---RRSGLITVAAVLALGVFGVGGAYAYRTYVGSPRSGEPPIIKADN 241 YE+ Y+++ + R RR+ ++TV +LAL V G GGA AYRT+ G+ R+GEPP+IKAD Sbjct: 236 YEDGYDDQADQRALKPRRNTMLTVVGILALAVVGTGGALAYRTFAGTTRTGEPPVIKADT 295 Query: 242 TPTKV-IPAQADAPAKTPDRMATGDGTEKIVSREETPVDVNSKT--AGPRVVFPPLNANA 298 +PTKV P+ +A DR+A+ +G E +VSREE P S+ +GPRVV P LN N Sbjct: 296 SPTKVPGPSNDNAGKPIQDRLASSNGVEALVSREEQPAADPSRMPGSGPRVVLPQLNQNP 355 Query: 299 NPPPAASVQ-TAQPAPAPVTANGTLPNNEPRKVRTLSVKGDTPDGTQATATVPAKPPAAA 357 NPPP ASV A+P P NGTL +EPRK++T S++ D D A AA Sbjct: 356 NPPPVASVAPGAKPNLPPPPNNGTLAGDEPRKIKTYSIRPDQADAAAQPAGAARAAAPAA 415 Query: 358 KPPVSRGNPAAANASV-NSPMSLVPGQAEAAPAAPPTRVAST--SAAPVGGGGYLVQVSS 414 + P RG A ANAS N+P+SL P AE PA P RVAS S GGY+VQVSS Sbjct: 416 RTP-GRGV-ADANASAGNAPLSLSPNSAET-PAPRPQRVASAPPSEPAATSGGYVVQVSS 472 Query: 415 QKNEADAQASYRTLQGKYRSVLGSQPLVVKRVDLGEKGVYYRAFAGPFASSEEASQVCKS 474 Q+NEA+A+ASYR+LQ K+ SVLGSQP ++KRVDLG KG YYRA GPF+S+E+A QVC + Sbjct: 473 QRNEAEAKASYRSLQSKFPSVLGSQPPLIKRVDLGSKGTYYRAMVGPFSSAEQAQQVCGN 532 Query: 475 LMSAGGPQCLIQRN 488 L SAGG QC++QRN Sbjct: 533 LKSAGG-QCVVQRN 545 >ref|YP_004108970.1| Sporulation domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU44237.1| Sporulation domain protein [Rhodopseudomonas palustris DX-1] Length = 544 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 241/565 (42%), Positives = 301/565 (53%), Gaps = 98/565 (17%) Query: 1 MADRYQDRHFPA--DTA------SKADSDPLAELARLIGQTDPFGSANK---PPPRPLQS 49 M DRYQDR FPA D + K ++DPLAELARLIGQ DPFG A + PP QS Sbjct: 1 MTDRYQDRPFPAYEDESVTSRYPQKPENDPLAELARLIGQADPFGKAGRVEQAPPIAPQS 60 Query: 50 RANARPQQYEPQ--AADEDAPPAGPPTWMQRARQEAVA-------------------PPP 88 R+ P AA++D P+WMQ ++ PP Sbjct: 61 RSTDFSASRGPSSVAAEDDLSARPMPSWMQHRQRAPEPARAPEPPEPILPPEPDFKQPPS 120 Query: 89 VQHTED-------------EEPEQDYQPKPVHPLHRYAAQQAQPAP----APVAQYRPVE 131 + P+ + PV P+ A P P AP+ Q+R Sbjct: 121 FVSAATPRRAAATGYVQAPQAPQASIESMPVEPM---ALDTRLPDPRFDPAPIEQHRLDL 177 Query: 132 APRQPEAFDEEPHYQ---GGGQSQDPSRYDDALYGQLEAGEQDLQRDPA----YPDDPYA 184 QP+ EP + +P RYDDALYGQL A DPA Y D Y Sbjct: 178 V--QPDRVHYEPQFDPLPASTAPLEPGRYDDALYGQLPA-------DPAPIGGYQDPSYG 228 Query: 185 YEEAYEEEPE---PRRRRSGLITVAAVLALGVFGVGGAYAYRTYVGSPRSGEPPIIKADN 241 Y + Y++ + + RR+ ++TV A+LAL V G GGA AYRT+ G+PRSGEPP+IKAD Sbjct: 229 YGDGYDDMSDGQAVKPRRNNMMTVVAILALAVVGTGGALAYRTFSGAPRSGEPPVIKADT 288 Query: 242 TPTKV-IPAQADAPAKTPDRMATGDGTEKIVSREETPVDVNSKT--AGPRVVFPPLNANA 298 +PTK+ P+ +A DR+A+G G E +VSREE P S+ +GPRVV P LN N Sbjct: 289 SPTKIPGPSNDNAGKPIQDRLASGTGVEALVSREEQPAADPSRMPGSGPRVVLPQLNQNP 348 Query: 299 NPPPAASVQ-TAQPAPAPVTANGTLPNNEPRKVRTLSVKGDTPDGTQATATVPAKPPAAA 357 NPP ASV +P P NGTL +EPRK++T S++ D D A PA A Sbjct: 349 NPPTVASVTPGGKPNLTPPPNNGTLAGDEPRKIKTYSIRPDQADH--------AGQPAGA 400 Query: 358 KPPVSR------------GNPAAANASV-NSPMSLVPGQAEAAPAAPPTRVASTSAAPVG 404 SR N A ANAS N+P+SL P PA P RVAS A P Sbjct: 401 AQQASRTPPPAAAARAPARNVADANASAGNAPLSLSPNTTADTPAPRPQRVASLPAEPAA 460 Query: 405 -GGGYLVQVSSQKNEADAQASYRTLQGKYRSVLGSQPLVVKRVDLGEKGVYYRAFAGPFA 463 GGY+VQVSSQ++EADA+ASYRTLQ K+ S+LGSQP ++K+VDLG KGVYYRA GPFA Sbjct: 461 TAGGYVVQVSSQRSEADAKASYRTLQSKFPSLLGSQPHIIKKVDLGNKGVYYRAMVGPFA 520 Query: 464 SSEEASQVCKSLMSAGGPQCLIQRN 488 S+E+A QVC SL SAGG QC +QRN Sbjct: 521 SAEQAQQVCGSLKSAGG-QCFVQRN 544