BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0021.p         (109 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01047486.1| HesB/YadR/YfhF [Nitrobacter sp. Nb-311A] >gi|...   194   4e-48
ref|YP_318422.1| HesB/YadR/YfhF [Nitrobacter winogradskyi Nb-255...   191   4e-47
ref|YP_577030.1| HesB/YadR/YfhF [Nitrobacter hamburgensis X14] >...   191   4e-47
ref|YP_002289253.1| HesB/YadR/YfhF [Oligotropha carboxidovorans ...   190   5e-47
ref|YP_532376.1| hypothetical protein RPC_2506 [Rhodopseudomonas...   189   9e-47

>ref|ZP_01047486.1| HesB/YadR/YfhF [Nitrobacter sp. Nb-311A]
 gb|EAQ34591.1| HesB/YadR/YfhF [Nitrobacter sp. Nb-311A]
          Length = 110

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 95/107 (88%), Positives = 101/107 (94%)

Query: 3   AAITVSERAARRIGQILSKEGEGAKLRISVEGGGCSGFQYKFDVERTQADDDLVIERDSA 62
           A ITVSERAARRIG+IL  EG+GA LRISVEGGGCSGFQYKFD+ER +ADDDLVI RDSA
Sbjct: 4   ANITVSERAARRIGEILKSEGDGAMLRISVEGGGCSGFQYKFDIERAKADDDLVIARDSA 63

Query: 63  VVLIDPASVPFLAGSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI 109
           VVL+DPASVPFL+GSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI
Sbjct: 64  VVLVDPASVPFLSGSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI 110


>ref|YP_318422.1| HesB/YadR/YfhF [Nitrobacter winogradskyi Nb-255]
 gb|ABA05070.1| HesB/YadR/YfhF [Nitrobacter winogradskyi Nb-255]
          Length = 110

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 94/107 (87%), Positives = 100/107 (93%)

Query: 3   AAITVSERAARRIGQILSKEGEGAKLRISVEGGGCSGFQYKFDVERTQADDDLVIERDSA 62
           A ITVSERAARRI +IL  EG+GA LRISVEGGGCSGFQYKFD+ER +ADDDLVI RDSA
Sbjct: 4   ANITVSERAARRIREILKSEGDGAMLRISVEGGGCSGFQYKFDIERAKADDDLVIARDSA 63

Query: 63  VVLIDPASVPFLAGSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI 109
           VVL+DPASVPFL+GSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI
Sbjct: 64  VVLVDPASVPFLSGSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI 110


>ref|YP_577030.1| HesB/YadR/YfhF [Nitrobacter hamburgensis X14]
 gb|ABE62570.1| HesB/YadR/YfhF [Nitrobacter hamburgensis X14]
          Length = 110

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 92/105 (87%), Positives = 100/105 (95%)

Query: 5   ITVSERAARRIGQILSKEGEGAKLRISVEGGGCSGFQYKFDVERTQADDDLVIERDSAVV 64
           ITVSERAARRIG+IL  EG+GA LRISVEGGGCSGFQYKFD+ER +A+DDLVI RD+AVV
Sbjct: 6   ITVSERAARRIGEILKSEGDGAMLRISVEGGGCSGFQYKFDIERAKAEDDLVIARDTAVV 65

Query: 65  LIDPASVPFLAGSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI 109
           L+DPASVPFL+GSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI
Sbjct: 66  LVDPASVPFLSGSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI 110


>ref|YP_002289253.1| HesB/YadR/YfhF [Oligotropha carboxidovorans OM5]
 ref|YP_004632712.1| iron-sulfur cluster insertion protein ErpA [Oligotropha
           carboxidovorans OM5]
 gb|ACI93388.1| HesB/YadR/YfhF [Oligotropha carboxidovorans OM5]
 gb|AEI02895.1| putative iron-sulfur cluster insertion protein ErpA [Oligotropha
           carboxidovorans OM4]
 gb|AEI06471.1| putative iron-sulfur cluster insertion protein ErpA [Oligotropha
           carboxidovorans OM5]
          Length = 109

 Score =  190 bits (483), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 91/109 (83%), Positives = 102/109 (93%)

Query: 1   MTAAITVSERAARRIGQILSKEGEGAKLRISVEGGGCSGFQYKFDVERTQADDDLVIERD 60
           MTA +T+SERAARRIG+IL  EGEGAKLRISVEGGGCSGFQYKFD+++TQA+DDLVI RD
Sbjct: 1   MTANVTISERAARRIGEILKSEGEGAKLRISVEGGGCSGFQYKFDIDKTQAEDDLVIVRD 60

Query: 61  SAVVLIDPASVPFLAGSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI 109
           +AVVL+D +S PFLA SE+DFVDDLIGASFRVVNPNATASCGCGTSFSI
Sbjct: 61  NAVVLVDSSSAPFLADSELDFVDDLIGASFRVVNPNATASCGCGTSFSI 109


>ref|YP_532376.1| hypothetical protein RPC_2506 [Rhodopseudomonas palustris BisB18]
 gb|ABD88057.1| HesB/YadR/YfhF [Rhodopseudomonas palustris BisB18]
          Length = 109

 Score =  189 bits (481), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 92/109 (84%), Positives = 100/109 (91%)

Query: 1   MTAAITVSERAARRIGQILSKEGEGAKLRISVEGGGCSGFQYKFDVERTQADDDLVIERD 60
           MTA++T+SERAARRIG+ILSKEG GA LRISVEGGGCSGFQYKFDVER Q +DD VI RD
Sbjct: 1   MTASVTISERAARRIGEILSKEGTGAMLRISVEGGGCSGFQYKFDVERNQNNDDTVIARD 60

Query: 61  SAVVLIDPASVPFLAGSEVDFVDDLIGASFRVVNPNATASCGCGTSFSI 109
           SAVVL+D ASVPFL G+E+DFVDDLIGASFRV NPNATASCGCGTSFSI
Sbjct: 61  SAVVLVDSASVPFLEGAELDFVDDLIGASFRVNNPNATASCGCGTSFSI 109