BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0020.p         (237 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_486369.1| acriflavin resistance protein [Rhodopseudomonas...   364   7e-99
ref|YP_569931.1| acriflavin resistance protein [Rhodopseudomonas...   360   1e-97
ref|YP_532368.1| acriflavin resistance protein [Rhodopseudomonas...   358   3e-97
ref|YP_781542.1| acriflavin resistance protein [Rhodopseudomonas...   335   2e-90
ref|ZP_08629730.1| RND multidrug efflux transporter [Bradyrhizob...   321   7e-86

>ref|YP_486369.1| acriflavin resistance protein [Rhodopseudomonas palustris HaA2]
 gb|ABD07458.1| Acriflavin resistance protein [Rhodopseudomonas palustris HaA2]
          Length = 1042

 Score =  364 bits (934), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 185/201 (92%), Positives = 193/201 (96%)

Query: 37   GFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM 96
            GFSGTAQVFQ+SLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM
Sbjct: 842  GFSGTAQVFQESLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM 901

Query: 97   MFGMELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRVGLSAEHAIREAALLRFRPIMMT 156
            +F MELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRVGLSAEHAIREAALLRFRPIMMT
Sbjct: 902  LFDMELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRVGLSAEHAIREAALLRFRPIMMT 961

Query: 157  TFAAIFGTLPIALGAGAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLDRIDRRLRR 216
            TFAAIFGTLPIALG GAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLD+IDR+L+R
Sbjct: 962  TFAAIFGTLPIALGTGAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLDKIDRKLKR 1021

Query: 217  KLDPQAEAGGDVERPQVVAAE 237
            +L+PQ E   D ERP+ VAAE
Sbjct: 1022 RLEPQHEELPDGERPRAVAAE 1042


>ref|YP_569931.1| acriflavin resistance protein [Rhodopseudomonas palustris BisB5]
 gb|ABE40030.1| acriflavin resistance protein [Rhodopseudomonas palustris BisB5]
          Length = 1042

 Score =  360 bits (923), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 182/201 (90%), Positives = 192/201 (95%)

Query: 37   GFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM 96
            GFSGTAQVFQ+SLRGQGVLILAAVFAA+VILGILYESFIHPITIISGLPSAGIGAILTLM
Sbjct: 842  GFSGTAQVFQESLRGQGVLILAAVFAAYVILGILYESFIHPITIISGLPSAGIGAILTLM 901

Query: 97   MFGMELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRVGLSAEHAIREAALLRFRPIMMT 156
            +F MELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRVGLSAEHAIREAALLRFRPIMMT
Sbjct: 902  LFNMELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRVGLSAEHAIREAALLRFRPIMMT 961

Query: 157  TFAAIFGTLPIALGAGAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLDRIDRRLRR 216
            TFAAIFGTLP+ALG GAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLD+IDR+L+R
Sbjct: 962  TFAAIFGTLPVALGTGAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLDKIDRKLKR 1021

Query: 217  KLDPQAEAGGDVERPQVVAAE 237
            +L+PQ E   D ER + VAAE
Sbjct: 1022 RLEPQLEELADGERRRAVAAE 1042


>ref|YP_532368.1| acriflavin resistance protein [Rhodopseudomonas palustris BisB18]
 gb|ABD88049.1| acriflavin resistance protein [Rhodopseudomonas palustris BisB18]
          Length = 1041

 Score =  358 bits (919), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 183/201 (91%), Positives = 192/201 (95%), Gaps = 1/201 (0%)

Query: 37   GFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM 96
            GFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM
Sbjct: 842  GFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM 901

Query: 97   MFGMELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRVGLSAEHAIREAALLRFRPIMMT 156
            +F MELSVIAMIGIVMLVGIVKKNAIMMVDFALERRR GLSAE AIREAALLRFRPIMMT
Sbjct: 902  LFNMELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRFGLSAEQAIREAALLRFRPIMMT 961

Query: 157  TFAAIFGTLPIALGAGAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLDRIDRRLRR 216
            TFAAIFGTLPIALGAGAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLD+ DRRL+R
Sbjct: 962  TFAAIFGTLPIALGAGAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLDKFDRRLKR 1021

Query: 217  KLDPQAEAGGDVERPQVVAAE 237
            KL+PQ +A  + +RP++ AAE
Sbjct: 1022 KLEPQLDALNE-DRPRIAAAE 1041


>ref|YP_781542.1| acriflavin resistance protein [Rhodopseudomonas palustris BisA53]
 gb|ABJ06562.1| acriflavin resistance protein [Rhodopseudomonas palustris BisA53]
          Length = 1042

 Score =  335 bits (860), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 188/225 (83%), Positives = 203/225 (90%), Gaps = 5/225 (2%)

Query: 14   SLDDLIALEFRDRRVSFLPRQ-PXGFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYE 72
            ++D++  LE    R S LP     GFSGTAQVFQDSLRGQGVLILAAVFAA+VILGILYE
Sbjct: 822  AVDEITKLE----RSSNLPVTIATGFSGTAQVFQDSLRGQGVLILAAVFAAYVILGILYE 877

Query: 73   SFIHPITIISGLPSAGIGAILTLMMFGMELSVIAMIGIVMLVGIVKKNAIMMVDFALERR 132
            SFIHPITIISGLPSAGIGAILTLM+F MELSVIAMIGIVMLVGIVKKNAIMMVDFALERR
Sbjct: 878  SFIHPITIISGLPSAGIGAILTLMLFNMELSVIAMIGIVMLVGIVKKNAIMMVDFALERR 937

Query: 133  RVGLSAEHAIREAALLRFRPIMMTTFAAIFGTLPIALGAGAGAELRQPLGVAVVGGLCVS 192
            R G++AE AIREAALLRFRPIMMTTFAAIFGTLPIALGAGAGAELRQPLG+AVVGGLCVS
Sbjct: 938  RFGINAEQAIREAALLRFRPIMMTTFAAIFGTLPIALGAGAGAELRQPLGIAVVGGLCVS 997

Query: 193  QLLTLFITPVIYIYLDRIDRRLRRKLDPQAEAGGDVERPQVVAAE 237
            QLLTLFITPVIYIYLDRIDRRLRR+L+PQ    G+ +RP++ AAE
Sbjct: 998  QLLTLFITPVIYIYLDRIDRRLRRRLEPQLAETGEADRPRIAAAE 1042


>ref|ZP_08629730.1| RND multidrug efflux transporter [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07585.1| RND multidrug efflux transporter [Bradyrhizobiaceae bacterium SG-6C]
          Length = 1040

 Score =  321 bits (822), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 183/201 (91%), Positives = 189/201 (94%), Gaps = 2/201 (0%)

Query: 37   GFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM 96
            GFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM
Sbjct: 842  GFSGTAQVFQDSLRGQGVLILAAVFAAFVILGILYESFIHPITIISGLPSAGIGAILTLM 901

Query: 97   MFGMELSVIAMIGIVMLVGIVKKNAIMMVDFALERRRVGLSAEHAIREAALLRFRPIMMT 156
            +F MELSVIAMIGIVMLVGIVKKNAIMMVDFA+ERR VGLSAEHAIREAALLRFRPIMMT
Sbjct: 902  LFKMELSVIAMIGIVMLVGIVKKNAIMMVDFAIERRAVGLSAEHAIREAALLRFRPIMMT 961

Query: 157  TFAAIFGTLPIALGAGAGAELRQPLGVAVVGGLCVSQLLTLFITPVIYIYLDRIDRRLRR 216
            TFAAIFGTLPIALGAGAGAELRQPLGV+VVGGL VSQLLTLFITPVIYIYLDRIDRRLRR
Sbjct: 962  TFAAIFGTLPIALGAGAGAELRQPLGVSVVGGLLVSQLLTLFITPVIYIYLDRIDRRLRR 1021

Query: 217  KLDPQAEAGGDVERPQVVAAE 237
            +LDP  +   D   P+V AAE
Sbjct: 1022 RLDPTLQEPADA--PRVAAAE 1040