BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0019.p         (61 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_532368.1| acriflavin resistance protein [Rhodopseudomonas...   107   5e-22
ref|ZP_08629730.1| RND multidrug efflux transporter [Bradyrhizob...   103   9e-21
ref|YP_781542.1| acriflavin resistance protein [Rhodopseudomonas...   100   5e-20
ref|YP_569931.1| acriflavin resistance protein [Rhodopseudomonas...   100   1e-19
ref|YP_486369.1| acriflavin resistance protein [Rhodopseudomonas...    97   7e-19

>ref|YP_532368.1| acriflavin resistance protein [Rhodopseudomonas palustris BisB18]
 gb|ABD88049.1| acriflavin resistance protein [Rhodopseudomonas palustris BisB18]
          Length = 1041

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 56/59 (94%)

Query: 1   MKTANGQTIPLDAVARLVPTVGPLQINHQGQQPAVTISFNLAPGYSLGYAVDKITELVA 59
           MKTAN QTIP+D VA+LVPTVGPLQINHQGQQPAVTISFNLAPG+SLGYAVD+IT++ A
Sbjct: 773 MKTANNQTIPMDVVAKLVPTVGPLQINHQGQQPAVTISFNLAPGHSLGYAVDEITKIEA 831


>ref|ZP_08629730.1| RND multidrug efflux transporter [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP07585.1| RND multidrug efflux transporter [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 1040

 Score =  103 bits (257), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 54/57 (94%)

Query: 1   MKTANGQTIPLDAVARLVPTVGPLQINHQGQQPAVTISFNLAPGYSLGYAVDKITEL 57
           +KTAN QTIPL+ VA++VPTVGPLQINHQGQQPAVTISFNLAPG SLGYAVDKIT++
Sbjct: 773 VKTANNQTIPLETVAKMVPTVGPLQINHQGQQPAVTISFNLAPGTSLGYAVDKITQI 829


>ref|YP_781542.1| acriflavin resistance protein [Rhodopseudomonas palustris BisA53]
 gb|ABJ06562.1| acriflavin resistance protein [Rhodopseudomonas palustris BisA53]
          Length = 1042

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 52/57 (91%)

Query: 1   MKTANGQTIPLDAVARLVPTVGPLQINHQGQQPAVTISFNLAPGYSLGYAVDKITEL 57
           MKTAN + IP+D VA+LVPTVGPLQINHQGQQPAVTISFNLAP  SLGYAVD+IT+L
Sbjct: 773 MKTANDRIIPMDVVAKLVPTVGPLQINHQGQQPAVTISFNLAPNQSLGYAVDEITKL 829


>ref|YP_569931.1| acriflavin resistance protein [Rhodopseudomonas palustris BisB5]
 gb|ABE40030.1| acriflavin resistance protein [Rhodopseudomonas palustris BisB5]
          Length = 1042

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 55/61 (90%)

Query: 1   MKTANGQTIPLDAVARLVPTVGPLQINHQGQQPAVTISFNLAPGYSLGYAVDKITELVAA 60
           +KTAN QTIP+DAVAR+VP+VGPLQINHQGQQPAVTISFNLA G SLG AVD+IT++  A
Sbjct: 773 LKTANNQTIPIDAVARMVPSVGPLQINHQGQQPAVTISFNLAEGQSLGAAVDRITQIEQA 832

Query: 61  A 61
           +
Sbjct: 833 S 833


>ref|YP_486369.1| acriflavin resistance protein [Rhodopseudomonas palustris HaA2]
 gb|ABD07458.1| Acriflavin resistance protein [Rhodopseudomonas palustris HaA2]
          Length = 1042

 Score = 97.4 bits (241), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 1   MKTANGQTIPLDAVARLVPTVGPLQINHQGQQPAVTISFNLAPGYSLGYAVDKITEL 57
           +KT N QTIP+DAVA++VPTVGPLQINHQGQQPAVTISFNLA G SLG AVD+IT++
Sbjct: 773 LKTGNNQTIPIDAVAKMVPTVGPLQINHQGQQPAVTISFNLAEGQSLGAAVDRITQI 829