BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0007.p (156 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771061.1| 3-methylcrotonyl-CoA carboxylase subunit alpha ... 223 1e-56 ref|YP_001240020.1| putative acyl-CoA carboxylase biotin-carryin... 200 7e-50 ref|YP_781828.1| carbamoyl-phosphate synthase L chain, ATP-bindi... 198 3e-49 ref|YP_001205680.1| putative acyl-CoA carboxylase biotin-carryin... 191 4e-47 ref|YP_577381.1| carbamoyl-phosphate synthase L chain, ATP-bindi... 189 1e-46 >ref|NP_771061.1| 3-methylcrotonyl-CoA carboxylase subunit alpha [Bradyrhizobium japonicum USDA 110] dbj|BAC49686.1| 3-methylcrotonyl-CoA carboxylase alpha subunit [Bradyrhizobium japonicum USDA 110] Length = 687 Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 108/147 (73%), Positives = 123/147 (83%), Gaps = 4/147 (2%) Query: 1 MLAKVIAWAPTREGAIEKLNRGLEETDVRGIVTNIPFLSALVMHKDTRANAIDTGFIERE 60 MLAK+IAWAPTR+ AIE+LNRGLE++DVRGIVTNIPFLSAL+ H+ RANAIDTGFIERE Sbjct: 409 MLAKMIAWAPTRDVAIERLNRGLEDSDVRGIVTNIPFLSALITHQKVRANAIDTGFIERE 468 Query: 61 LKNLTSGTGAAGEFELCAAVAAIVNDEQKAARREANSPWQAFGWMPVGRRQRVFSFRQGH 120 L LT T A GE ELCAAVAAIVNDE++AA+ EANSPWQ FGWMPVGRRQR F+FR GH Sbjct: 469 LAVLTQATPAPGELELCAAVAAIVNDERQAAQAEANSPWQTFGWMPVGRRQRSFAFRVGH 528 Query: 121 ELA----QTITLHYGNGPSTLSVGGRE 143 + Q ITL+YG+GPSTL +G RE Sbjct: 529 GVGHGPEQKITLNYGSGPSTLVIGERE 555 >ref|YP_001240020.1| putative acyl-CoA carboxylase biotin-carrying subunit [Bradyrhizobium sp. BTAi1] gb|ABQ36114.1| putative acyl-CoA carboxylase biotin-carrying subunit [Bradyrhizobium sp. BTAi1] Length = 670 Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 99/143 (69%), Positives = 114/143 (79%), Gaps = 1/143 (0%) Query: 1 MLAKVIAWAPTREGAIEKLNRGLEETDVRGIVTNIPFLSALVMHKDTRANAIDTGFIERE 60 MLAK+IAWAPTR+ AIE+LNRGLE+TDVRGIV+NIPFLSAL+ H D ANAIDTGFIER Sbjct: 395 MLAKMIAWAPTRDVAIERLNRGLEDTDVRGIVSNIPFLSALLTHPDVAANAIDTGFIERH 454 Query: 61 LKNLTSGTGAAGEFELCAAVAAIVNDEQKAARREANSPWQAFGWMPVGRRQRVFSFRQ-G 119 L+ LT AAG+ ELCAAVAA++ DEQKAA E SPW+A GWMPVG R+RVFSFRQ G Sbjct: 455 LERLTEAGAAAGDVELCAAVAAVLIDEQKAASHEVGSPWRAQGWMPVGLRERVFSFRQSG 514 Query: 120 HELAQTITLHYGNGPSTLSVGGR 142 +T+TL YG G TLS+ GR Sbjct: 515 SSDPRTVTLTYGPGVRTLSIDGR 537 >ref|YP_781828.1| carbamoyl-phosphate synthase L chain, ATP-binding protein [Rhodopseudomonas palustris BisA53] gb|ABJ06848.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein [Rhodopseudomonas palustris BisA53] Length = 669 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 96/142 (67%), Positives = 111/142 (78%) Query: 1 MLAKVIAWAPTREGAIEKLNRGLEETDVRGIVTNIPFLSALVMHKDTRANAIDTGFIERE 60 MLAKVIAWAPTR AI++LNRGLEETDVRG+VTNIPFLSALV H + RAN+IDTGFIERE Sbjct: 394 MLAKVIAWAPTRNAAIDRLNRGLEETDVRGVVTNIPFLSALVTHPEVRANSIDTGFIERE 453 Query: 61 LKNLTSGTGAAGEFELCAAVAAIVNDEQKAARREANSPWQAFGWMPVGRRQRVFSFRQGH 120 L+ LT AGE ELCAAVAAI+ E AA+ +A SPWQ GWMPVGRRQR F+FR GH Sbjct: 454 LQALTPPAAEAGELELCAAVAAILLQEAAAAQADATSPWQTAGWMPVGRRQRTFAFRHGH 513 Query: 121 ELAQTITLHYGNGPSTLSVGGR 142 + + TL YG+GP + + GR Sbjct: 514 DTERKATLRYGSGPMDIEIDGR 535 >ref|YP_001205680.1| putative acyl-CoA carboxylase biotin-carrying subunit/subunit alpha [Bradyrhizobium sp. ORS 278] emb|CAL77454.1| putative acyl-CoA carboxylase biotin-carrying subunit; alpha chain [Bradyrhizobium sp. ORS 278] Length = 670 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 97/146 (66%), Positives = 111/146 (76%), Gaps = 1/146 (0%) Query: 1 MLAKVIAWAPTREGAIEKLNRGLEETDVRGIVTNIPFLSALVMHKDTRANAIDTGFIERE 60 MLAK+IAWAPTRE AIE+LNRGLE+TDVRGIV+NIPFLSAL+ H D +ANAIDTGFIER Sbjct: 395 MLAKMIAWAPTREVAIERLNRGLEDTDVRGIVSNIPFLSALLTHPDVQANAIDTGFIERH 454 Query: 61 LKNLTSGTGAAGEFELCAAVAAIVNDEQKAARREANSPWQAFGWMPVGRRQRVFSFRQG- 119 L LT AG+ ELCAAVAAI+ DEQ AA E SPW++ GWMPVG RQRVFSFRQG Sbjct: 455 LSLLTQSGAVAGDVELCAAVAAILIDEQMAAANEQGSPWRSSGWMPVGLRQRVFSFRQGV 514 Query: 120 HELAQTITLHYGNGPSTLSVGGREXS 145 QT+TL YG T+++ R S Sbjct: 515 GAEPQTVTLAYGPDVQTVTIEDRVTS 540 >ref|YP_577381.1| carbamoyl-phosphate synthase L chain, ATP-binding [Nitrobacter hamburgensis X14] gb|ABE62921.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein [Nitrobacter hamburgensis X14] Length = 666 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/143 (63%), Positives = 109/143 (76%), Gaps = 1/143 (0%) Query: 1 MLAKVIAWAPTREGAIEKLNRGLEETDVRGIVTNIPFLSALVMHKDTRANAIDTGFIERE 60 MLAKVIAWAPTRE AI +L+R L+ETDVRG+VTNIPFLSALVMH D RANAIDTGFIER Sbjct: 393 MLAKVIAWAPTREAAISRLDRSLQETDVRGVVTNIPFLSALVMHPDVRANAIDTGFIERH 452 Query: 61 LKNLTSGTGAAGEFELCAAVAAIVNDEQKAARREANSPWQAFGWMPVGRRQRVFSFRQGH 120 LK+LT GE EL AAVAAI+ E +++R +A SPWQ GWMPVGRRQR F FRQG Sbjct: 453 LKDLTGTPAVPGETELAAAVAAILQTESRSSRPDAASPWQTAGWMPVGRRQRWFVFRQG- 511 Query: 121 ELAQTITLHYGNGPSTLSVGGRE 143 ++ + YGNG + + +G ++ Sbjct: 512 QVEHKVIFAYGNGSAEIRIGEKD 534