BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0006.p         (97 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771061.1| 3-methylcrotonyl-CoA carboxylase subunit alpha ...    87   8e-16
ref|YP_001991793.1| carbamoyl-phosphate synthase L chain ATP-bin...    87   1e-15
ref|YP_781828.1| carbamoyl-phosphate synthase L chain, ATP-bindi...    87   1e-15
ref|YP_567489.1| carbamoyl-phosphate synthase L chain, ATP-bindi...    87   1e-15
ref|YP_004109242.1| carbamoyl-phosphate synthase L chain ATP-bin...    87   1e-15

>ref|NP_771061.1| 3-methylcrotonyl-CoA carboxylase subunit alpha [Bradyrhizobium
           japonicum USDA 110]
 dbj|BAC49686.1| 3-methylcrotonyl-CoA carboxylase alpha subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 687

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%)

Query: 1   VFFIEMNTRLQVEHPVTELITGVDLVEWQLRVAFGEALPL 40
           VFFIEMNTRLQVEHPVTELITG+DLVEWQLRVAFGEALPL
Sbjct: 307 VFFIEMNTRLQVEHPVTELITGIDLVEWQLRVAFGEALPL 346


>ref|YP_001991793.1| carbamoyl-phosphate synthase L chain ATP-binding [Rhodopseudomonas
           palustris TIE-1]
 gb|ACF01318.1| Carbamoyl-phosphate synthase L chain ATP-binding [Rhodopseudomonas
           palustris TIE-1]
          Length = 670

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%)

Query: 1   VFFIEMNTRLQVEHPVTELITGVDLVEWQLRVAFGEALPL 40
           VFFIEMNTRLQVEHPVTELI+GVDLVEWQLRVAFGEALPL
Sbjct: 291 VFFIEMNTRLQVEHPVTELISGVDLVEWQLRVAFGEALPL 330


>ref|YP_781828.1| carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Rhodopseudomonas palustris BisA53]
 gb|ABJ06848.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Rhodopseudomonas palustris BisA53]
          Length = 669

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%)

Query: 1   VFFIEMNTRLQVEHPVTELITGVDLVEWQLRVAFGEALPL 40
           VFFIEMNTRLQVEHPVTELITG+DLVEWQLRVAFGEALPL
Sbjct: 292 VFFIEMNTRLQVEHPVTELITGIDLVEWQLRVAFGEALPL 331


>ref|YP_567489.1| carbamoyl-phosphate synthase L chain, ATP-binding [Rhodopseudomonas
           palustris BisB5]
 gb|ABE37588.1| 3-methylcrotonoyl-CoA carboxylase, alpha subunit [Rhodopseudomonas
           palustris BisB5]
          Length = 679

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%)

Query: 1   VFFIEMNTRLQVEHPVTELITGVDLVEWQLRVAFGEALPL 40
           VFFIEMNTRLQVEHPVTELI+GVDLVEWQLRVAFGEALPL
Sbjct: 292 VFFIEMNTRLQVEHPVTELISGVDLVEWQLRVAFGEALPL 331


>ref|YP_004109242.1| carbamoyl-phosphate synthase L chain ATP-binding protein
           [Rhodopseudomonas palustris DX-1]
 gb|ADU44509.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Rhodopseudomonas palustris DX-1]
          Length = 670

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%)

Query: 1   VFFIEMNTRLQVEHPVTELITGVDLVEWQLRVAFGEALPL 40
           VFFIEMNTRLQVEHPVTELI+GVDLVEWQLRVAFGEALPL
Sbjct: 291 VFFIEMNTRLQVEHPVTELISGVDLVEWQLRVAFGEALPL 330