BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0004.p         (283 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771061.1| 3-methylcrotonyl-CoA carboxylase subunit alpha ...   379   e-103
ref|ZP_08629936.1| methylcrotonyl-CoA carboxylase biotin-contain...   365   3e-99
ref|YP_004109242.1| carbamoyl-phosphate synthase L chain ATP-bin...   348   4e-94
ref|YP_001205680.1| putative acyl-CoA carboxylase biotin-carryin...   347   9e-94
ref|YP_781828.1| carbamoyl-phosphate synthase L chain, ATP-bindi...   345   4e-93

>ref|NP_771061.1| 3-methylcrotonyl-CoA carboxylase subunit alpha [Bradyrhizobium
           japonicum USDA 110]
 dbj|BAC49686.1| 3-methylcrotonyl-CoA carboxylase alpha subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 687

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/203 (90%), Positives = 194/203 (95%)

Query: 17  ARARDSYLNIERVIAAAKETGVEAVHPGYGFLSENAEFAQACLEAGLVFVGPTAEMMTAM 76
           ARARDSYLN+ER+I AA++TG EAVHPGYGFLSENAEFA ACL+AGLVFVGPTA MMTAM
Sbjct: 78  ARARDSYLNVERLIEAARKTGAEAVHPGYGFLSENAEFAHACLDAGLVFVGPTAGMMTAM 137

Query: 77  GSKSGSKALMEKAGVPLVPGYHGEAQDEATLAEAANRIGFPVLVKASAGGGGRGMRVVNS 136
           GSKSGSKALMEKAGVPLVPGYHGEAQDEATLA+AAN+IGFP+LVKASAGGGGRGMR+V S
Sbjct: 138 GSKSGSKALMEKAGVPLVPGYHGEAQDEATLAKAANQIGFPILVKASAGGGGRGMRIVRS 197

Query: 137 AAELTAAITSAKREAKAAFGDDRMLIEKYVQNPRHIEVQIIGDSHGNLLSLWERECTLQR 196
           AAEL  AI SAKREAKAAFGDDRMLIEKYV NPRHIEVQIIGDSHGNLLSL+ERECTLQR
Sbjct: 198 AAELGPAIVSAKREAKAAFGDDRMLIEKYVDNPRHIEVQIIGDSHGNLLSLFERECTLQR 257

Query: 197 RHQKVIEEAPSPTLNAAQRETVC 219
           RHQKVIEEAPSPTLNAAQRETVC
Sbjct: 258 RHQKVIEEAPSPTLNAAQRETVC 280


>ref|ZP_08629936.1| methylcrotonyl-CoA carboxylase biotin-containing subunit
           [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07305.1| methylcrotonyl-CoA carboxylase biotin-containing subunit
           [Bradyrhizobiaceae bacterium SG-6C]
          Length = 671

 Score =  365 bits (938), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 177/211 (83%), Positives = 192/211 (90%)

Query: 17  ARARDSYLNIERVIAAAKETGVEAVHPGYGFLSENAEFAQACLEAGLVFVGPTAEMMTAM 76
           ARARDSYLN++R+I AAK+TG EAVHPGYGFLSENA+FA+ C   G+VFVGPT EMM AM
Sbjct: 65  ARARDSYLNVDRIIEAAKKTGAEAVHPGYGFLSENADFARRCAAEGIVFVGPTGEMMEAM 124

Query: 77  GSKSGSKALMEKAGVPLVPGYHGEAQDEATLAEAANRIGFPVLVKASAGGGGRGMRVVNS 136
           GSKSGSKALMEKAGVPLVPGYHGEAQDE TLA+AA +IG+PVL KASAGGGGRGMR+V S
Sbjct: 125 GSKSGSKALMEKAGVPLVPGYHGEAQDEKTLADAAAKIGYPVLAKASAGGGGRGMRIVRS 184

Query: 137 AAELTAAITSAKREAKAAFGDDRMLIEKYVQNPRHIEVQIIGDSHGNLLSLWERECTLQR 196
           A EL  AI SAKREA AAFGDDRMLIEK+V NPRHIEVQIIGDSHGNL+SL+ERECTLQR
Sbjct: 185 AEELGPAIVSAKREALAAFGDDRMLIEKFVLNPRHIEVQIIGDSHGNLISLFERECTLQR 244

Query: 197 RHQKVIEEAPSPTLNAAQRETVCEAARKAAG 227
           RHQKVIEEAPSPTLNAAQR+ VCEAARKAAG
Sbjct: 245 RHQKVIEEAPSPTLNAAQRDAVCEAARKAAG 275


>ref|YP_004109242.1| carbamoyl-phosphate synthase L chain ATP-binding protein
           [Rhodopseudomonas palustris DX-1]
 gb|ADU44509.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Rhodopseudomonas palustris DX-1]
          Length = 670

 Score =  348 bits (894), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 181/211 (85%), Positives = 197/211 (93%)

Query: 17  ARARDSYLNIERVIAAAKETGVEAVHPGYGFLSENAEFAQACLEAGLVFVGPTAEMMTAM 76
           ARARDSYLNI R+I AA++TG EAVHPGYGFLSE+AEFAQAC +AGLVFVGPT EM+TAM
Sbjct: 62  ARARDSYLNIARIIEAARQTGAEAVHPGYGFLSESAEFAQACADAGLVFVGPTPEMITAM 121

Query: 77  GSKSGSKALMEKAGVPLVPGYHGEAQDEATLAEAANRIGFPVLVKASAGGGGRGMRVVNS 136
           GSKSGSKALMEKAGVPLVPGYHG AQDEATLAEA +RIGFPVLVKASAGGGGRGMRVV  
Sbjct: 122 GSKSGSKALMEKAGVPLVPGYHGAAQDEATLAEATDRIGFPVLVKASAGGGGRGMRVVRK 181

Query: 137 AAELTAAITSAKREAKAAFGDDRMLIEKYVQNPRHIEVQIIGDSHGNLLSLWERECTLQR 196
           A EL+AAI SAKREAKAAFGDD +LIE+YV NPRHIEVQI+GDSHGNL+SL+ERECTLQR
Sbjct: 182 ADELSAAIVSAKREAKAAFGDDTLLIERYVDNPRHIEVQIVGDSHGNLVSLFERECTLQR 241

Query: 197 RHQKVIEEAPSPTLNAAQRETVCEAARKAAG 227
           RHQKVIEEAPSPTL+AAQR+ VCEAAR+AAG
Sbjct: 242 RHQKVIEEAPSPTLDAAQRDKVCEAARRAAG 272


>ref|YP_001205680.1| putative acyl-CoA carboxylase biotin-carrying subunit/subunit alpha
           [Bradyrhizobium sp. ORS 278]
 emb|CAL77454.1| putative acyl-CoA carboxylase biotin-carrying subunit; alpha chain
           [Bradyrhizobium sp. ORS 278]
          Length = 670

 Score =  347 bits (891), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 175/203 (86%), Positives = 190/203 (93%)

Query: 17  ARARDSYLNIERVIAAAKETGVEAVHPGYGFLSENAEFAQACLEAGLVFVGPTAEMMTAM 76
           ARARDSYLNIER+I AAK TG EAVHPGYGFLSE+AEFAQACL+AGLVFVGPTA M+TAM
Sbjct: 64  ARARDSYLNIERLIEAAKATGAEAVHPGYGFLSESAEFAQACLDAGLVFVGPTAAMITAM 123

Query: 77  GSKSGSKALMEKAGVPLVPGYHGEAQDEATLAEAANRIGFPVLVKASAGGGGRGMRVVNS 136
           GSKSGSK LME+AGVPLVPGYHGEAQDEATLA  A RIG+PVL+KASAGGGGRGMRVVN+
Sbjct: 124 GSKSGSKFLMEQAGVPLVPGYHGEAQDEATLANEAARIGYPVLIKASAGGGGRGMRVVNA 183

Query: 137 AAELTAAITSAKREAKAAFGDDRMLIEKYVQNPRHIEVQIIGDSHGNLLSLWERECTLQR 196
           A +L  A+ SAKREAKAAFGDDR+LIEK+VQNPRHIEVQIIGDSHGNL+SL+ERECTLQR
Sbjct: 184 AGDLADAVISAKREAKAAFGDDRVLIEKFVQNPRHIEVQIIGDSHGNLVSLFERECTLQR 243

Query: 197 RHQKVIEEAPSPTLNAAQRETVC 219
           RHQKVIEEAPSPTL+ AQRETVC
Sbjct: 244 RHQKVIEEAPSPTLSPAQRETVC 266


>ref|YP_781828.1| carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Rhodopseudomonas palustris BisA53]
 gb|ABJ06848.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Rhodopseudomonas palustris BisA53]
          Length = 669

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 170/203 (83%), Positives = 187/203 (92%)

Query: 17  ARARDSYLNIERVIAAAKETGVEAVHPGYGFLSENAEFAQACLEAGLVFVGPTAEMMTAM 76
           ARARDSYL+I R++ AAK+TG EAVHPGYGFLSE+AEFAQAC +AGLVFVGPTA M+TAM
Sbjct: 63  ARARDSYLSIARILTAAKQTGAEAVHPGYGFLSESAEFAQACADAGLVFVGPTASMITAM 122

Query: 77  GSKSGSKALMEKAGVPLVPGYHGEAQDEATLAEAANRIGFPVLVKASAGGGGRGMRVVNS 136
           GSKSGSK LMEKAGVPLVPGYHG AQD+ATL   A ++GFPVLVKASAGGGGRGMR+V +
Sbjct: 123 GSKSGSKELMEKAGVPLVPGYHGAAQDDATLLAEAEKVGFPVLVKASAGGGGRGMRIVRA 182

Query: 137 AAELTAAITSAKREAKAAFGDDRMLIEKYVQNPRHIEVQIIGDSHGNLLSLWERECTLQR 196
           AA+L AAI SAKREAKAAFGDDRMLIE+YV NPRHIEVQ+IGDSHGNLLSL+ERECTLQR
Sbjct: 183 AADLAAAIVSAKREAKAAFGDDRMLIERYVDNPRHIEVQVIGDSHGNLLSLFERECTLQR 242

Query: 197 RHQKVIEEAPSPTLNAAQRETVC 219
           RHQKVIEEAPSPTL+ AQRETVC
Sbjct: 243 RHQKVIEEAPSPTLDPAQRETVC 265