BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0002.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767946.1| Na+/H+ antiporter [Bradyrhizobium japonicum USD... 422 e-116 ref|ZP_08627267.1| Na+/H+ antiporter [Bradyrhizobiaceae bacteriu... 374 e-101 ref|YP_001773334.1| sodium/hydrogen exchanger [Methylobacterium ... 311 1e-82 ref|YP_001923591.1| sodium/hydrogen exchanger [Methylobacterium ... 309 4e-82 ref|YP_002419749.1| sodium/hydrogen exchanger [Methylobacterium ... 298 9e-79 >ref|NP_767946.1| Na+/H+ antiporter [Bradyrhizobium japonicum USDA 110] dbj|BAC46571.1| Na+/H+ antiporter [Bradyrhizobium japonicum USDA 110] Length = 525 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/339 (66%), Positives = 264/339 (77%) Query: 1 MKIREFVPSITIALVGSLAAGFLFAQVWMMITRRITEAPSAIITQFGGTFMVWIIAEHLG 60 +K E P+I +ALVGS+ AG L ++ + +R+ EAPSAII QF TFMVWI AEHLG Sbjct: 184 LKWSEVAPTIALALVGSVLAGLLAGRIIPLFLQRVKEAPSAIILQFATTFMVWIAAEHLG 243 Query: 61 LSGILTIIAYAITISRTAPARTSARLRVSSYAVWETVVFVLNVLAFMLIGLQLRPIWSGL 120 LSGILTI+ YAIT++RTA A ARLRV SYAVWET+VFVLNVLAFMLIG+Q+RPIW+ L Sbjct: 244 LSGILTIVVYAITMARTAGAHMPARLRVPSYAVWETMVFVLNVLAFMLIGMQMRPIWTRL 303 Query: 121 DDEVRWKYCSFAAAILAVVILARILWVMPYGALLRTLKARNLLPAHVVDAVPTLKRGFIV 180 D +VRW+YC AA IL V+L R+LWV Y LR L A L V + K G I+ Sbjct: 304 DADVRWEYCVAAAWILLTVVLVRLLWVTFYRTTLRALIAHGLYHPKDPKQVASPKGGLII 363 Query: 181 SWCGMRGIVTLAAAFALPEWFPYRDLILLTAFAVVLGSLVIQGLTLRPLILALNFADDDP 240 SWCGMRG+VTLA AFALPE FPYRD I+ AFAVVLGSLVIQGLTLRPLILA DDDP Sbjct: 364 SWCGMRGLVTLATAFALPENFPYRDFIVFIAFAVVLGSLVIQGLTLRPLILAFGLKDDDP 423 Query: 241 VGREAARARGVVFRAALDEIDADPSEEAEILRLEYRAVLLRAENDPDGGLTSRELPSDPL 300 VG E AR R V +RAALD I++DPSEEAEILRLEYRA+L++A++DP+GG+ S ELP+DPL Sbjct: 424 VGIEVARGRAVAYRAALDAIESDPSEEAEILRLEYRAILMQADDDPNGGIASGELPADPL 483 Query: 301 RRRAISAARQALLNLRRTEAIGDDAFHLVEEELDRAELS 339 RRRAI AAR+++ +LR TE IGDDAFH +EEELDRAELS Sbjct: 484 RRRAIEAARKSIFDLRATEVIGDDAFHRLEEELDRAELS 522 >ref|ZP_08627267.1| Na+/H+ antiporter [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09893.1| Na+/H+ antiporter [Bradyrhizobiaceae bacterium SG-6C] Length = 513 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 205/340 (60%), Positives = 249/340 (73%), Gaps = 2/340 (0%) Query: 1 MKIREFVPSITIALVGSLAAGFLFAQVWMMITRRITEAPSAIITQFGGTFMVWIIAEHLG 60 + + P + A+ GSL AGF+ A++ M++T RI + P+AI+ QF GTF+VWI AE L Sbjct: 173 LSVTHLAPILAYAIAGSLIAGFVLAKLSMLLTARIEDVPTAIVMQFAGTFLVWIAAEQLQ 232 Query: 61 LSGILTIIAYAITISRTAPARTSARLRVSSYAVWETVVFVLNVLAFMLIGLQLRPIWSGL 120 LS ILTI+ YAITI+R+APART ARLRV S+AVWETVVF+LNV+AF+LIG+QLRPIW+GL Sbjct: 233 LSAILTIVVYAITIARSAPARTPARLRVPSFAVWETVVFLLNVMAFVLIGMQLRPIWAGL 292 Query: 121 DDEVRWKYCSFAAAILAVVILARILWVMPYGALLRTLKAR-NLLPAHVVDAVPTLKRGFI 179 + R Y AAA+LA VI RI+WV Y LL R P P+++ F+ Sbjct: 293 EASDRQNYVLVAAAVLATVIFVRIVWVTSYTTLLIAAMERLGWRPRRAAMGRPSVRGAFL 352 Query: 180 VSWCGMRGIVTLAAAFALPEWFPYRDLILLTAFAVVLGSLVIQGLTLRPLILALNFADDD 239 +SWCGMRGIVTLA AFALPE FPYRDLILLTAF+VVLG+LVIQGLTLRPLI D D Sbjct: 353 ISWCGMRGIVTLATAFALPEAFPYRDLILLTAFSVVLGTLVIQGLTLRPLIAWFALDDGD 412 Query: 240 PVGREAARARGVVFRAALDEIDADPSEEAEILRLEYRAVLLRAENDPDGGLTSRELPSDP 299 PVG E AR F AALD ID + + EAE+LRLEYR +L RAEN+PD GLTS ELP+DP Sbjct: 413 PVGHEVGWARRAAFHAALDAIDGNTTPEAELLRLEYRQLLDRAENNPD-GLTSSELPADP 471 Query: 300 LRRRAISAARQALLNLRRTEAIGDDAFHLVEEELDRAELS 339 LRR+AI+AAR+ L +R + IGDDAFHL+E E D AELS Sbjct: 472 LRRQAIAAARRVLFEMRESGEIGDDAFHLLEAEFDWAELS 511 >ref|YP_001773334.1| sodium/hydrogen exchanger [Methylobacterium sp. 4-46] gb|ACA20900.1| sodium/hydrogen exchanger [Methylobacterium sp. 4-46] Length = 521 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 180/340 (52%), Positives = 225/340 (66%), Gaps = 8/340 (2%) Query: 4 REFVPSITIALVGSLAAGFLFAQVWMMITRRITEAPSAIITQFGGTFMVWIIAEHLGLSG 63 R+ VP+ I +VGSL AG + A +++ R I +APS+I+ QF TF +W++AE GLSG Sbjct: 176 RDVVPTFLIGVVGSLVAGPVLAWIYVRAVRGIADAPSSIVLQFVATFGIWVMAERAGLSG 235 Query: 64 ILTIIAYAITISRTAPARTSARLRVSSYAVWETVVFVLNVLAFMLIGLQLRPIWSGLDDE 123 +LT+++YAIT++R +PA A LRV SYAVWET VFVLNVLAF+LIGLQ+ PI GL E Sbjct: 236 VLTVVSYAITVARISPATMPAHLRVPSYAVWETAVFVLNVLAFVLIGLQVGPILEGLTPE 295 Query: 124 VRWKYCSFAAAILAVVILARILWVMPYGALLRTLKARNLLPAHVVDAVPTLKRGFIVSWC 183 R +Y AAA+ V+L R+ WVM A R + + +L V+WC Sbjct: 296 DRNRYAVVAAALFLTVVLVRLAWVMGAAAFGRLWRRYG---GAIGPEPASLSGSATVAWC 352 Query: 184 GMRGIVTLAAAFALPEW----FPYRDLILLTAFAVVLGSLVIQGLTLRPLILALNFADDD 239 GMRG+VT+A A ALPE FPYRDL++LTAFAVVLG+LVIQGLTLRPL+ L DDD Sbjct: 353 GMRGVVTVALALALPEGGERAFPYRDLVVLTAFAVVLGTLVIQGLTLRPLLAWLALRDDD 412 Query: 240 PVGREAARARGVVFRAALDEIDADPSEEAEILRLEYRAVLLRAENDPDGGLTSRELPSDP 299 PVGRE AR +RAA+ + + S A LR E+ AVL AE D + G LPSD Sbjct: 413 PVGREVGLARAEAYRAAVASLSRERSPHAAALRHEFAAVLNEAERDRE-GRAPGSLPSDA 471 Query: 300 LRRRAISAARQALLNLRRTEAIGDDAFHLVEEELDRAELS 339 RRRAI AARQ +L+LR AIGDDAF +EEELD AELS Sbjct: 472 PRRRAIEAARQTILDLRDRGAIGDDAFFRLEEELDWAELS 511 >ref|YP_001923591.1| sodium/hydrogen exchanger [Methylobacterium populi BJ001] gb|ACB79056.1| sodium/hydrogen exchanger [Methylobacterium populi BJ001] Length = 525 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 176/349 (50%), Positives = 225/349 (64%), Gaps = 13/349 (3%) Query: 1 MKIREFVPSITIALVGSLAAGFLFAQVWMMITRRITEAPSAIITQFGGTFMVWIIAEHLG 60 + E P+ + +VGSL AG L A V++ I RR+ E S I+ QF F +WI AE + Sbjct: 173 FSVSEVAPAFAVGVVGSLVAGPLAALVYLRILRRVEEPVSVIVLQFAAAFGLWIAAEAME 232 Query: 61 LSGILTIIAYAITISRTAPARTSARLRVSSYAVWETVVFVLNVLAFMLIGLQLRPIWSGL 120 LSG+LT++++AIT++R AP +TS RLRV S AVWET +FVLNVLAF+LIG Q+ PI S + Sbjct: 233 LSGVLTVVSFAITVARRAPGQTSPRLRVISNAVWETAIFVLNVLAFVLIGEQIGPILSRM 292 Query: 121 DDEVRWKYCSFAAAILAVVILARILWVMPYGALLRTLKARNLLPAHVVDAVPT----LKR 176 E + Y S A A++ VIL RI WV+P A+ R + H D PT L Sbjct: 293 TPEQEFAYASVAGAVVVTVILVRIAWVLPASAVRRVGFGSGSV--HPDDLRPTRDLGLGA 350 Query: 177 GFIVSWCGMRGIVTLAAAFALPEW------FPYRDLILLTAFAVVLGSLVIQGLTLRPLI 230 GF VSW GMRG+VT+A A ALPE FPYRDLI+LTAF VV+G+LV+QGLTLRP++ Sbjct: 351 GFAVSWSGMRGLVTIATALALPEGGPEGREFPYRDLIVLTAFCVVIGTLVVQGLTLRPIL 410 Query: 231 LALNFADDDPVGREAARARGVVFRAALDEIDADPSEEAEILRLEYRAVLLRAENDPDGGL 290 L D DPVG E RAR + AA+D + D SE A+ LR E+ A L +AE + GL Sbjct: 411 ARLGLEDSDPVGHEVGRARAEAYGAAVDALKGDQSEAADALRREFHAALAQAEAHEE-GL 469 Query: 291 TSRELPSDPLRRRAISAARQALLNLRRTEAIGDDAFHLVEEELDRAELS 339 LP+D RRRAI AAR LL LRR IGDDA+ ++E+ELD AEL+ Sbjct: 470 APEGLPTDEPRRRAIHAARDRLLALRRNGRIGDDAYFVLEQELDWAELN 518 >ref|YP_002419749.1| sodium/hydrogen exchanger [Methylobacterium chloromethanicum CM4] gb|ACK81821.1| sodium/hydrogen exchanger [Methylobacterium chloromethanicum CM4] Length = 525 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 173/347 (49%), Positives = 225/347 (64%), Gaps = 17/347 (4%) Query: 5 EFVPSITIALVGSLAAGFLFAQVWMMITRRITEAPSAIITQFGGTFMVWIIAEHLGLSGI 64 E P+ I +VGSL AG L A V++ I RR+ E S I+ QF F +WI AE + LSG+ Sbjct: 177 EVAPAFLIGVVGSLVAGPLAALVYLRILRRVDEPASVIVLQFAAAFGLWIAAEAMELSGV 236 Query: 65 LTIIAYAITISRTAPARTSARLRVSSYAVWETVVFVLNVLAFMLIGLQLRPIWSGLDDEV 124 LT++++AIT++R AP +TS R RV S AVWET +FVLNVLAF+LIG Q+ PI + + E Sbjct: 237 LTVVSFAITVARYAPGQTSPRPRVISNAVWETAIFVLNVLAFVLIGEQIGPILARMTPEQ 296 Query: 125 RWKYCSFAAAILAVVILARILWVMPYGALLR------TLKARNLLPAHVVDAVPTLKRGF 178 + Y S A++ VIL RI WV+P A+ R + + +L PA + L GF Sbjct: 297 EFAYASVGGAVVVTVILVRIAWVLPASAIRRVGFGIASDQPDDLGPARDLG----LGAGF 352 Query: 179 IVSWCGMRGIVTLAAAFALPEW------FPYRDLILLTAFAVVLGSLVIQGLTLRPLILA 232 VSW GMRG+VT+A A ALPE FPYRDLI+LTAF VV+G+LV+QGL+LRP++ Sbjct: 353 AVSWSGMRGLVTIATALALPEGGPDGGAFPYRDLIVLTAFCVVIGTLVLQGLSLRPILGW 412 Query: 233 LNFADDDPVGREAARARGVVFRAALDEIDADPSEEAEILRLEYRAVLLRAENDPDGGLTS 292 L D DPVGRE RAR + AA++ + D SE A+ LR E+ A L +AE + GL Sbjct: 413 LGLEDSDPVGREVGRARAEAYGAAVEALKNDRSEAADALRREFHAALAQAEAHEE-GLAP 471 Query: 293 RELPSDPLRRRAISAARQALLNLRRTEAIGDDAFHLVEEELDRAELS 339 LP+D RRRAI AAR LL LRR IGDDA+ ++EEELD AEL+ Sbjct: 472 EGLPTDEPRRRAIHAARDRLLTLRRNGRIGDDAYLVLEEELDWAELN 518