BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0031.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003609070.1| hypothetical protein BC1002_5649 [Burkholder...    95   3e-18
ref|ZP_03263810.1| conserved hypothetical protein [Burkholderia ...    94   8e-18
ref|YP_824528.1| hypothetical protein Acid_3266 [Candidatus Soli...    86   2e-15
ref|ZP_03269089.1| conserved hypothetical protein [Burkholderia ...    78   4e-13
ref|YP_387850.1| hypothetical protein Dde_1354 [Desulfovibrio al...    75   3e-12

>ref|YP_003609070.1| hypothetical protein BC1002_5649 [Burkholderia sp. CCGE1002]
 gb|ADG19559.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
          Length = 112

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 66/94 (70%)

Query: 47  KLLAIGTFTVKGTPERWKPLLDAEVRDTVRLYLTGKIDQWYLKQDQSGVVFVMSVTDPKE 106
           K+LAIGTF      +  + +L +EVR+TV+LYL GK+DQWY  QD++GV F+++VTD  +
Sbjct: 14  KILAIGTFPPGTDMQLVQHILPSEVRETVQLYLDGKVDQWYSLQDRAGVAFILNVTDVSQ 73

Query: 107 ALELLGRFPFGQAGLMEFQIIPLGPIAPLRVLLT 140
           A E+L   P G+A LM F ++P+GP+ PL  LL 
Sbjct: 74  AHEMLEALPLGKAHLMTFSLLPIGPLKPLGKLLN 107


>ref|ZP_03263810.1| conserved hypothetical protein [Burkholderia sp. H160]
 gb|EEA04554.1| conserved hypothetical protein [Burkholderia sp. H160]
          Length = 112

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 66/97 (68%)

Query: 47  KLLAIGTFTVKGTPERWKPLLDAEVRDTVRLYLTGKIDQWYLKQDQSGVVFVMSVTDPKE 106
           K+LAIGTF      +  + +L +E R+T +LYL GK+DQWY  QD++GV F+++VTD  +
Sbjct: 14  KILAIGTFPPGTDMQLVQHILPSEARETAQLYLEGKLDQWYSLQDRAGVAFILNVTDVSQ 73

Query: 107 ALELLGRFPFGQAGLMEFQIIPLGPIAPLRVLLTDPA 143
           A E+L   P G+A LM F ++P+GP+ PL  LL  P+
Sbjct: 74  AHEMLEALPLGKAHLMTFSLLPIGPLKPLGKLLNPPS 110


>ref|YP_824528.1| hypothetical protein Acid_3266 [Candidatus Solibacter usitatus
           Ellin6076]
 gb|ABJ84243.1| conserved hypothetical protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 129

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 7/127 (5%)

Query: 13  LTAVLAAINPTASLAQSAMPAAPPPSSSLDVPTTKLLAIGTFTVKGTPERWKPLLDAEVR 72
           L A+L A +P AS+AQS   AAPP        TT+++ I T     T ++   ++ +E+R
Sbjct: 4   LIALLIAASPVASVAQSPSSAAPPR-------TTEVMVILTAKEGVTRQQIMAIMPSEIR 56

Query: 73  DTVRLYLTGKIDQWYLKQDQSGVVFVMSVTDPKEALELLGRFPFGQAGLMEFQIIPLGPI 132
           +TV+LYL GKI QWY + D  GV+F++      EA  ++   P  +  LM+++ IP+GP+
Sbjct: 57  ETVKLYLDGKIRQWYSRGDGKGVIFLIDAKTQAEARAVMETLPLSKEQLMDYEYIPVGPL 116

Query: 133 APLRVLL 139
            PL  L+
Sbjct: 117 MPLTALI 123


>ref|ZP_03269089.1| conserved hypothetical protein [Burkholderia sp. H160]
 gb|EDZ99329.1| conserved hypothetical protein [Burkholderia sp. H160]
          Length = 118

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 4/112 (3%)

Query: 28  QSAMPAAPPPSSSLDVPTTKLLAIGTFTVKGTPERWKPLLDAEVRDTVRLYLTGKIDQWY 87
           QS   A P  ++S    TT + A+ T     T ER   ++ AE+R TV+LYL GKI +WY
Sbjct: 4   QSHAHAQPKTATS----TTGVFALLTAKPGVTRERIMAIMPAEIRATVQLYLEGKIREWY 59

Query: 88  LKQDQSGVVFVMSVTDPKEALELLGRFPFGQAGLMEFQIIPLGPIAPLRVLL 139
            ++D  G VF+++  D  EA  +L   P     +++ + IP+GP+ PLR+LL
Sbjct: 60  AREDGRGAVFLLNARDLDEATSILESLPPANENMLDHEYIPVGPLMPLRLLL 111


>ref|YP_387850.1| hypothetical protein Dde_1354 [Desulfovibrio alaskensis G20]
 gb|ABB38155.1| hypothetical protein Dde_1354 [Desulfovibrio alaskensis G20]
          Length = 101

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 59/95 (62%)

Query: 47  KLLAIGTFTVKGTPERWKPLLDAEVRDTVRLYLTGKIDQWYLKQDQSGVVFVMSVTDPKE 106
           K+LAI   +   TPER + L   EV  T+++YL   + + Y ++D+SG V ++ V   +E
Sbjct: 2   KVLAIDKVSPDATPERVRELFMKEVHQTIKMYLADVVREIYFREDRSGTVMMLEVPSMEE 61

Query: 107 ALELLGRFPFGQAGLMEFQIIPLGPIAPLRVLLTD 141
           A +++   P  + GL+E+ +IPLGP  PL +L++D
Sbjct: 62  ARKIVDTLPMVRDGLLEYDLIPLGPFMPLALLVSD 96