BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0029.p (318 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001888464.1| AraC family transcriptional regulator [Burkh... 530 e-148 ref|YP_001862267.1| AraC family transcriptional regulator [Burkh... 518 e-145 ref|YP_002496345.1| AraC family transcriptional regulator [Methy... 381 e-104 ref|YP_002977368.1| AraC family transcriptional regulator [Rhizo... 379 e-103 ref|YP_769630.1| AraC family transcriptional regulator [Rhizobiu... 378 e-103 >ref|YP_001888464.1| AraC family transcriptional regulator [Burkholderia phytofirmans PsJN] gb|ACD19094.1| transcriptional regulator, AraC family [Burkholderia phytofirmans PsJN] Length = 318 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 266/318 (83%), Positives = 288/318 (90%) Query: 1 MHRVGFIVPQRFQLMSLAALTAFEIVNLPPADQRYDIHLLSEHGGPVRSSSGMTLQTEPF 60 MHR+GFIVP RFQLMSLAALT FEI N+PP + YD+HLLSEHGGPV SS GMTLQTE F Sbjct: 1 MHRIGFIVPPRFQLMSLAALTVFEIANMPPTGRCYDVHLLSEHGGPVESSGGMTLQTEAF 60 Query: 61 GDPAFDTVIVGSITEMDMPSSDATTIAFVQAAAKASRRVASICSGAFVLAEAGLLSGRRA 120 G+P FDT+IVGSITEM MPSS AT IAFV+ AA+ SRR+ SICSGAFVLAEAGLL GRRA Sbjct: 61 GNPGFDTLIVGSITEMKMPSSGATMIAFVKEAARVSRRITSICSGAFVLAEAGLLDGRRA 120 Query: 121 TMHWAHAASFRARFPNVRAEEDRIFINDGPVWTSAGMTAGIDLVLALIDNDLGPEVAKMV 180 TMHWAHAA FRARFPNV EEDRIF+NDGP+WTSAGMTAGIDL LAL+DNDLGP+ AKMV Sbjct: 121 TMHWAHAAEFRARFPNVVTEEDRIFVNDGPIWTSAGMTAGIDLALALLDNDLGPDTAKMV 180 Query: 181 ARLLVMNQRRMGGQKQHSALLDMTPKSDRIELVLAHIRQNLRNPLTIEELAAVANLSPRQ 240 ARLLVMNQRR+GGQKQHSALLDMTPKSDRIE VLAHIR+NLRNPLT+EELA VANLSPRQ Sbjct: 181 ARLLVMNQRRLGGQKQHSALLDMTPKSDRIEAVLAHIRRNLRNPLTVEELADVANLSPRQ 240 Query: 241 FSRAFLAETGQSPAKAVERLRLEAARFMIEEGRHTVNVVAQETGFVDRERMRRAFLRTFG 300 FSRAF+AETGQSPAKAVE+LRLEAARFMIE+GRHT+NVVAQETGF DRERMRRAFLRTFG Sbjct: 241 FSRAFVAETGQSPAKAVEQLRLEAARFMIEQGRHTINVVAQETGFADRERMRRAFLRTFG 300 Query: 301 VPPEILRRNARREAEAAA 318 VP + LRR+ARREA A Sbjct: 301 VPADFLRRSARREAVAGG 318 >ref|YP_001862267.1| AraC family transcriptional regulator [Burkholderia phymatum STM815] gb|ACC75221.1| transcriptional regulator, AraC family [Burkholderia phymatum STM815] Length = 318 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 259/313 (82%), Positives = 285/313 (91%) Query: 1 MHRVGFIVPQRFQLMSLAALTAFEIVNLPPADQRYDIHLLSEHGGPVRSSSGMTLQTEPF 60 MHR+GFIVP+RFQ+MSLAALT FEI N+PP Y++HLLSEHGGPV SS GM L+TE F Sbjct: 1 MHRIGFIVPKRFQMMSLAALTVFEIANMPPRGACYEVHLLSEHGGPVVSSGGMRLETEVF 60 Query: 61 GDPAFDTVIVGSITEMDMPSSDATTIAFVQAAAKASRRVASICSGAFVLAEAGLLSGRRA 120 GDPAFDTVIVGSITEM MP+ DA +AFV+ AAKASRR+ SICSGAFVLAEAGLL GRRA Sbjct: 61 GDPAFDTVIVGSITEMKMPAPDAAVVAFVKKAAKASRRITSICSGAFVLAEAGLLDGRRA 120 Query: 121 TMHWAHAASFRARFPNVRAEEDRIFINDGPVWTSAGMTAGIDLVLALIDNDLGPEVAKMV 180 TMHWAHA+ FRARFPNVR EEDRIF+NDGP WTSAGMTAGIDL LAL+DNDLGP+ AKMV Sbjct: 121 TMHWAHASEFRARFPNVRTEEDRIFVNDGPFWTSAGMTAGIDLALALLDNDLGPDAAKMV 180 Query: 181 ARLLVMNQRRMGGQKQHSALLDMTPKSDRIELVLAHIRQNLRNPLTIEELAAVANLSPRQ 240 ARLLVMNQRR+GGQ QHSALLDMTPKSDRIE V+AHIR+NLRNPLTIEELA VANLSPRQ Sbjct: 181 ARLLVMNQRRLGGQMQHSALLDMTPKSDRIERVVAHIRRNLRNPLTIEELAEVANLSPRQ 240 Query: 241 FSRAFLAETGQSPAKAVERLRLEAARFMIEEGRHTVNVVAQETGFVDRERMRRAFLRTFG 300 FSRAF+AETGQSPAKAVE+LRLEAARFMIE+GRHT+NVVAQETGF DRERMRRAF+RT+G Sbjct: 241 FSRAFVAETGQSPAKAVEQLRLEAARFMIEQGRHTINVVAQETGFADRERMRRAFVRTYG 300 Query: 301 VPPEILRRNARRE 313 VP +ILRR+AR E Sbjct: 301 VPADILRRSARAE 313 >ref|YP_002496345.1| AraC family transcriptional regulator [Methylobacterium nodulans ORS 2060] gb|ACL56042.1| transcriptional regulator, AraC family [Methylobacterium nodulans ORS 2060] Length = 316 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 190/313 (60%), Positives = 240/313 (76%), Gaps = 2/313 (0%) Query: 1 MHRVGFIVPQRFQLMSLAALTAFEIVNLPPADQRYDIHLLSEHGGPVRSSSGMTLQTEPF 60 M V F++ FQ+MSLAA+TAFE+ N D Y ++ LSE GGPV SS G ++T+PF Sbjct: 1 MRSVAFLLFPGFQMMSLAAVTAFELANAASGDAAYTVNFLSETGGPVASSIGAAVETQPF 60 Query: 61 GDPAFDTVIVGSITEMDMPSSDATTIAFVQAAAKASRRVASICSGAFVLAEAGLLSGRRA 120 G+ DTV+V + E+ + A IA VQAA++ +RR+A IC+GAF LA+AGLL GRRA Sbjct: 61 GEAHHDTVVV--VGELSAGLAPAGFIAGVQAASRRTRRIAGICTGAFPLAQAGLLDGRRA 118 Query: 121 TMHWAHAASFRARFPNVRAEEDRIFINDGPVWTSAGMTAGIDLVLALIDNDLGPEVAKMV 180 T HWA+A + + +P V+ EEDRIFI DGPVWTSAGMTA IDL LALI+ DLG ++++ + Sbjct: 119 TTHWAYARALQRLYPAVKVEEDRIFIADGPVWTSAGMTAAIDLALALIEEDLGRDMSRAL 178 Query: 181 ARLLVMNQRRMGGQKQHSALLDMTPKSDRIELVLAHIRQNLRNPLTIEELAAVANLSPRQ 240 AR LV+ RR GGQ Q SALL++ PKSDRI+ L + R+NLRNPL++EELA A+LSPRQ Sbjct: 179 ARKLVVYHRRSGGQSQFSALLELEPKSDRIQSALTYARRNLRNPLSVEELAEAAHLSPRQ 238 Query: 241 FSRAFLAETGQSPAKAVERLRLEAARFMIEEGRHTVNVVAQETGFVDRERMRRAFLRTFG 300 FSR F AETGQSPAKAVE LRLEAAR M+E+GRH ++VVA+ETGF DRERMRRAFLR FG Sbjct: 239 FSRVFRAETGQSPAKAVENLRLEAARAMMEDGRHAIDVVARETGFADRERMRRAFLRAFG 298 Query: 301 VPPEILRRNARRE 313 PP+++RR+AR E Sbjct: 299 QPPQVIRRSARAE 311 >ref|YP_002977368.1| AraC family transcriptional regulator [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS57829.1| transcriptional regulator, AraC family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 314 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 186/313 (59%), Positives = 241/313 (76%), Gaps = 2/313 (0%) Query: 1 MHRVGFIVPQRFQLMSLAALTAFEIVNLPPADQRYDIHLLSEHGGPVRSSSGMTLQTEPF 60 M ++GF++ FQ+MSLAA++AFE NL ++ Y+I LSE+GGPV +S GM ++TE F Sbjct: 1 MQQIGFLLYPGFQIMSLAAVSAFEFANLELEEKVYEIRYLSENGGPVANSLGMMMETEAF 60 Query: 61 GDPAFDTVIVGSITEMDMPSSDATTIAFVQAAAKASRRVASICSGAFVLAEAGLLSGRRA 120 G PA DT+IV ++ +P +A F++AA A+RR+ASIC+GAF LAEAG+L GRRA Sbjct: 61 GTPALDTLIVAGAPDIRLP--NAAEADFIRAALPATRRLASICTGAFFLAEAGILDGRRA 118 Query: 121 TMHWAHAASFRARFPNVRAEEDRIFINDGPVWTSAGMTAGIDLVLALIDNDLGPEVAKMV 180 T HW + ++R+P ++ EEDRIFI DG +WTSAGMTAG+DL LA+++ D G EVA+ V Sbjct: 119 TTHWYVSRELQSRYPKIKMEEDRIFIIDGSIWTSAGMTAGLDLALAMVEKDHGFEVARAV 178 Query: 181 ARLLVMNQRRMGGQKQHSALLDMTPKSDRIELVLAHIRQNLRNPLTIEELAAVANLSPRQ 240 +R LV+ RR GGQ Q SALL++ PKSDRI+ LAH R NL++ L++EELA VA+LSPRQ Sbjct: 179 SRKLVVYHRRAGGQSQFSALLELEPKSDRIQKALAHARSNLKSALSVEELAEVAHLSPRQ 238 Query: 241 FSRAFLAETGQSPAKAVERLRLEAARFMIEEGRHTVNVVAQETGFVDRERMRRAFLRTFG 300 FSRAF ETGQSPAKAVE LRLEAAR M+E+GRH ++VVA+ETGF DRERMRRAFLR FG Sbjct: 239 FSRAFRDETGQSPAKAVENLRLEAARLMMEQGRHPIDVVARETGFADRERMRRAFLRAFG 298 Query: 301 VPPEILRRNARRE 313 PP+ +RR A +E Sbjct: 299 QPPQAIRRAALQE 311 >ref|YP_769630.1| AraC family transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841] emb|CAK09543.1| putative AraC family transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841] Length = 316 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/313 (59%), Positives = 240/313 (76%), Gaps = 2/313 (0%) Query: 1 MHRVGFIVPQRFQLMSLAALTAFEIVNLPPADQRYDIHLLSEHGGPVRSSSGMTLQTEPF 60 M ++GF++ FQ+MSLAA++AFE NL ++ Y+I LSE+GG V +S GM ++TE F Sbjct: 3 MQQIGFLLYPGFQIMSLAAVSAFEFANLELEEKAYEIRYLSENGGSVANSLGMMMETEAF 62 Query: 61 GDPAFDTVIVGSITEMDMPSSDATTIAFVQAAAKASRRVASICSGAFVLAEAGLLSGRRA 120 G PA DT+IV ++ +P +A F++AA A+RR+ASIC+GAF LAEAG+L GRRA Sbjct: 63 GAPALDTLIVAGAPDIRLP--NAAEADFIRAALPATRRLASICTGAFFLAEAGILDGRRA 120 Query: 121 TMHWAHAASFRARFPNVRAEEDRIFINDGPVWTSAGMTAGIDLVLALIDNDLGPEVAKMV 180 T HW + ++R+P ++ EEDRIFI DG +WTSAGMTAG+DL LA+++ D G EVA+ V Sbjct: 121 TTHWYVSRELQSRYPKIKMEEDRIFIIDGSIWTSAGMTAGLDLALAMVEKDHGFEVARAV 180 Query: 181 ARLLVMNQRRMGGQKQHSALLDMTPKSDRIELVLAHIRQNLRNPLTIEELAAVANLSPRQ 240 +R LV+ RR GGQ Q SALL++ PKSDRI+ LAH R NL++ L++EELA A+LSPRQ Sbjct: 181 SRKLVVYHRRAGGQSQFSALLELEPKSDRIQKALAHARSNLKSALSVEELAEAAHLSPRQ 240 Query: 241 FSRAFLAETGQSPAKAVERLRLEAARFMIEEGRHTVNVVAQETGFVDRERMRRAFLRTFG 300 FSRAF AETGQSPAKAVE LRLEAAR M+E+GRH ++VVA+ETGF DRERMRRAFLR FG Sbjct: 241 FSRAFRAETGQSPAKAVENLRLEAARLMMEQGRHPIDVVARETGFADRERMRRAFLRAFG 300 Query: 301 VPPEILRRNARRE 313 PP+ +RR A +E Sbjct: 301 QPPQAIRRAALQE 313