BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0020.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207013.1| putative two-component transcriptional regul... 361 5e-98 ref|YP_001241438.1| two component transcriptional regulator [Bra... 357 9e-97 ref|YP_577155.1| two component transcriptional regulator [Nitrob... 356 1e-96 ref|ZP_07028557.1| two component transcriptional regulator, wing... 345 2e-93 ref|YP_783798.1| two component transcriptional regulator [Rhodop... 343 1e-92 >ref|YP_001207013.1| putative two-component transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL78796.1| putative Two-component transcriptional regulator [Bradyrhizobium sp. ORS 278] Length = 221 Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 176/217 (81%), Positives = 196/217 (90%) Query: 1 MRVLLVEDDRRIASDVARALEAAGYVVEIVRDGEEAWFRGDTEDYGAVILDLGLPEMDGL 60 MRVLLVEDD R++SD++R L+AAGY+VE +GE+AWF GDTEDYGAV+LDLGLP MDGL Sbjct: 1 MRVLLVEDDPRLSSDLSRTLQAAGYLVETSANGEQAWFLGDTEDYGAVVLDLGLPGMDGL 60 Query: 61 SVLKRWRANARQMPVLILTARGSWAERVDGIDAGADDYLPKPFRTEELLARLRAIVRRSS 120 SVLKRWR R MPVLILTAR SWAERVDGIDAGADDYLPKPFR EELLARLRAIVRRS+ Sbjct: 61 SVLKRWRGAGRHMPVLILTARASWAERVDGIDAGADDYLPKPFRNEELLARLRAIVRRSA 120 Query: 121 GHASSVLSAGDLTLDERQMKVSLRGIPVALSQLEYRLVAYLLRHRGRVVPQHELDENVYG 180 GHA+ VLS+GDL LDERQMKVSL G+PVALSQLEYRL+AYLLRH GRVVPQHEL+ENVYG Sbjct: 121 GHAAPVLSSGDLALDERQMKVSLSGVPVALSQLEYRLIAYLLRHNGRVVPQHELEENVYG 180 Query: 181 PGQEHDSNALEVLVRRVRKKLGQEVIETRRGFGYSVP 217 G +HDSNALEVL+RRVRKKLG ++IETRRGFGY +P Sbjct: 181 LGHDHDSNALEVLIRRVRKKLGADIIETRRGFGYMIP 217 >ref|YP_001241438.1| two component transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ37532.1| two component transcriptional regulator, winged helix family [Bradyrhizobium sp. BTAi1] Length = 221 Score = 357 bits (915), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 175/217 (80%), Positives = 194/217 (89%) Query: 1 MRVLLVEDDRRIASDVARALEAAGYVVEIVRDGEEAWFRGDTEDYGAVILDLGLPEMDGL 60 MRVLLVEDD R++SD++R L+AAGY+VE +GE+AWF GDTEDYGAV+LDLGLP MDGL Sbjct: 1 MRVLLVEDDPRLSSDLSRTLQAAGYLVETSDNGEQAWFLGDTEDYGAVVLDLGLPGMDGL 60 Query: 61 SVLKRWRANARQMPVLILTARGSWAERVDGIDAGADDYLPKPFRTEELLARLRAIVRRSS 120 SVLKRWR R MPVLILTAR SWAERVDGIDAGADDYLPKPFR EELLARLRAIVRRS+ Sbjct: 61 SVLKRWRTAGRHMPVLILTARASWAERVDGIDAGADDYLPKPFRNEELLARLRAIVRRSA 120 Query: 121 GHASSVLSAGDLTLDERQMKVSLRGIPVALSQLEYRLVAYLLRHRGRVVPQHELDENVYG 180 GHA+ VLS+GDL LDERQMKVSL G+PV LSQLEYRL+AYLLR GRVVPQHEL+ENVYG Sbjct: 121 GHAAPVLSSGDLMLDERQMKVSLAGVPVPLSQLEYRLIAYLLRQSGRVVPQHELEENVYG 180 Query: 181 PGQEHDSNALEVLVRRVRKKLGQEVIETRRGFGYSVP 217 G +HDSNALEVL+RRVRKKLG E+IETRRGFGY +P Sbjct: 181 LGHDHDSNALEVLIRRVRKKLGAEIIETRRGFGYMIP 217 >ref|YP_577155.1| two component transcriptional regulator [Nitrobacter hamburgensis X14] gb|ABE62695.1| two component transcriptional regulator, winged helix family [Nitrobacter hamburgensis X14] Length = 221 Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 174/217 (80%), Positives = 199/217 (91%) Query: 1 MRVLLVEDDRRIASDVARALEAAGYVVEIVRDGEEAWFRGDTEDYGAVILDLGLPEMDGL 60 MRVL+VEDD+RIA+DV+R LEA+GYVVE V +GE+AWF GDTEDYGAVILDLGLP MDGL Sbjct: 1 MRVLVVEDDQRIAADVSRTLEASGYVVETVANGEDAWFLGDTEDYGAVILDLGLPGMDGL 60 Query: 61 SVLKRWRANARQMPVLILTARGSWAERVDGIDAGADDYLPKPFRTEELLARLRAIVRRSS 120 +VLKRWRAN R MPVL+LTARGSWAERVDGIDAGADDYLPKPFR EELLARLR+IVRRS+ Sbjct: 61 AVLKRWRANGRHMPVLVLTARGSWAERVDGIDAGADDYLPKPFRMEELLARLRSIVRRSA 120 Query: 121 GHASSVLSAGDLTLDERQMKVSLRGIPVALSQLEYRLVAYLLRHRGRVVPQHELDENVYG 180 GH SSV++AG++TLDERQMKV+ RG+P+ALS LEYRL+A+LLR+RGRVV Q ELDEN+YG Sbjct: 121 GHGSSVMTAGEITLDERQMKVTRRGVPIALSPLEYRLIAHLLRNRGRVVSQQELDENIYG 180 Query: 181 PGQEHDSNALEVLVRRVRKKLGQEVIETRRGFGYSVP 217 G+EHDSN LEVLV RVRKKLG +VIETRRGFGY +P Sbjct: 181 HGEEHDSNTLEVLVGRVRKKLGADVIETRRGFGYLMP 217 >ref|ZP_07028557.1| two component transcriptional regulator, winged helix family [Afipia sp. 1NLS2] gb|EFI49980.1| two component transcriptional regulator, winged helix family [Afipia sp. 1NLS2] Length = 220 Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 170/217 (78%), Positives = 194/217 (89%) Query: 1 MRVLLVEDDRRIASDVARALEAAGYVVEIVRDGEEAWFRGDTEDYGAVILDLGLPEMDGL 60 MRVL+VEDD+RIASDV+R LEA+GYVVE V +GE+A F GDTEDYGA+ILDLGLP M+GL Sbjct: 1 MRVLVVEDDQRIASDVSRTLEASGYVVETVANGEDALFLGDTEDYGAIILDLGLPGMEGL 60 Query: 61 SVLKRWRANARQMPVLILTARGSWAERVDGIDAGADDYLPKPFRTEELLARLRAIVRRSS 120 +VLKRWR N R MPVLILTARGSWAERVDGIDAGADDYLPKPFR EELLARLR+IVRRS+ Sbjct: 61 AVLKRWRTNGRHMPVLILTARGSWAERVDGIDAGADDYLPKPFRMEELLARLRSIVRRSA 120 Query: 121 GHASSVLSAGDLTLDERQMKVSLRGIPVALSQLEYRLVAYLLRHRGRVVPQHELDENVYG 180 GH SS++SAG++TLDERQMKV+ RG+P+ LS LEYRLVA+LLR+RGRVV E+DENVYG Sbjct: 121 GHGSSIMSAGEITLDERQMKVTRRGVPITLSPLEYRLVAHLLRNRGRVVSPQEIDENVYG 180 Query: 181 PGQEHDSNALEVLVRRVRKKLGQEVIETRRGFGYSVP 217 G+EHDSN LEVLV RVRKKLG + IETRRGFGY +P Sbjct: 181 HGEEHDSNTLEVLVGRVRKKLGADAIETRRGFGYLMP 217 >ref|YP_783798.1| two component transcriptional regulator [Rhodopseudomonas palustris BisA53] gb|ABJ08818.1| two component transcriptional regulator, winged helix family [Rhodopseudomonas palustris BisA53] Length = 221 Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 169/218 (77%), Positives = 192/218 (88%) Query: 1 MRVLLVEDDRRIASDVARALEAAGYVVEIVRDGEEAWFRGDTEDYGAVILDLGLPEMDGL 60 MRVL+VEDDRRIA+D+ R LEAAGYVVE+V DGEEAWFRGDTEDY A+ILDLGLP MDGL Sbjct: 1 MRVLVVEDDRRIAADLTRGLEAAGYVVEVVGDGEEAWFRGDTEDYAAIILDLGLPGMDGL 60 Query: 61 SVLKRWRANARQMPVLILTARGSWAERVDGIDAGADDYLPKPFRTEELLARLRAIVRRSS 120 +VLKRWR+N R++PVLILTARGSWAERVDGIDAGADDYLPKPFR EELLARLR+IVRRS Sbjct: 61 TVLKRWRSNDRRIPVLILTARGSWAERVDGIDAGADDYLPKPFRMEELLARLRSIVRRSV 120 Query: 121 GHASSVLSAGDLTLDERQMKVSLRGIPVALSQLEYRLVAYLLRHRGRVVPQHELDENVYG 180 G ASS++ G++++DERQM+V RG+PV LS LEYRLV+YL HRGRVV QHEL EN+YG Sbjct: 121 GQASSLIHVGEISIDERQMRVDRRGVPVNLSPLEYRLVSYLALHRGRVVSQHELSENIYG 180 Query: 181 PGQEHDSNALEVLVRRVRKKLGQEVIETRRGFGYSVPG 218 HDSNA+EVL+ RVRKKLG E+IETRRGFGY VPG Sbjct: 181 NEDAHDSNAIEVLIGRVRKKLGSELIETRRGFGYIVPG 218