BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0016.p (423 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239439.1| hypothetical protein BBta_3439 [Bradyrhizobi... 463 e-128 ref|YP_002131640.1| hypothetical protein PHZ_c2802 [Phenylobacte... 215 1e-53 ref|YP_001820769.1| hypothetical protein Oter_3895 [Opitutus ter... 211 3e-52 ref|YP_004087601.1| hypothetical protein Astex_1784 [Asticcacaul... 206 8e-51 ref|ZP_08179375.1| putative permease [Xanthomonas vesicatoria AT... 201 2e-49 >ref|YP_001239439.1| hypothetical protein BBta_3439 [Bradyrhizobium sp. BTAi1] gb|ABQ35533.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 370 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 245/337 (72%), Positives = 292/337 (86%) Query: 65 SFERALLVLSVVGVAGFAVWKLSDVLVLALGAALLALLLRGLAHELSRRTRIPEAWAVVP 124 SF R LL++ +VG AVWKL+D++VLA GAALLALLLRG+ HE+SR TR+PE WAV+ Sbjct: 32 SFTRRLLIVCLVGAMMLAVWKLADLVVLAFGAALLALLLRGVVHEVSRNTRLPEPWAVLL 91 Query: 125 VVLFLFGSIVAVGWLFGSQIASQFNLLAKDLPQSLTQLVHEFGSSSWGAWFLGHAQDINL 184 +L L G +V+V WLFGSQIA+QFN+LAKDLPQSLTQ+V EF + WG W +G AQD+N+ Sbjct: 92 TILALLGLVVSVTWLFGSQIANQFNILAKDLPQSLTQVVQEFVETPWGVWVVGRAQDVNI 151 Query: 185 GTATAPVASYVAALFGSVFRTAAYIAVLLFAALYFAVQPTRYLDGLLRLVPAPRRDGARE 244 G+AT P+A Y+AA FGSVF T+AY+AVLLFA+ YFAVQP RY+DGLLR+VPA RR A E Sbjct: 152 GSATGPLARYIAAFFGSVFHTSAYVAVLLFASGYFAVQPARYVDGLLRMVPADRRPRAEE 211 Query: 245 MLELLGTTLKRWIIGQSITMAVVGTLTAIGLALLGVTAPIALGLISGMFAFVPYVGPILA 304 ++ELLG+TL+RW+IGQSITMAVVGTLTAIGL LLGV APIALGLIS +FAFVPYVGP+LA Sbjct: 212 VIELLGSTLRRWLIGQSITMAVVGTLTAIGLLLLGVAAPIALGLISAIFAFVPYVGPVLA 271 Query: 305 SVSGILVASMQGPVLVGYVVALYAGIHFVEGNLITPLVQAEAIELPPVLTLFATLVFGLL 364 S+ GIL+A+MQGP + YV+ALYA IHFVEGNL+TPLVQAEA+ELPPVLTLFATL+FGLL Sbjct: 272 SLLGILMAAMQGPTIALYVIALYAAIHFVEGNLVTPLVQAEAVELPPVLTLFATLIFGLL 331 Query: 365 LGPVGVLLAAPLAVVLLVAVNALYIEGILGERRAWPS 401 LGP+GVLLAAPLAVV+L+AVN LYIEG+LGE R WPS Sbjct: 332 LGPIGVLLAAPLAVVVLLAVNTLYIEGMLGETRVWPS 368 >ref|YP_002131640.1| hypothetical protein PHZ_c2802 [Phenylobacterium zucineum HLK1] gb|ACG79211.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 355 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 139/349 (39%), Positives = 196/349 (56%), Gaps = 5/349 (1%) Query: 64 PSFERALLVLSVVGVAGFAVWKLSDVLVLALGAALLALLLRGLAHELSRRTRIPEAWAVV 123 P R L V + V + G VWKL+DV++LA GA L A+LL LA L R R+P WA+ Sbjct: 8 PFVGRLLTVAAFVAL-GALVWKLADVILLAFGAVLTAVLLHALADPLVRYARLPRPWALT 66 Query: 124 PVVLFLFGSIVAVGWLFGSQIASQFNLLAKDLPQSLTQLVHEFGSSSWGAWFLGHAQDIN 183 V+ L + +LFG + A Q L++ LP + L E S GA+ L + + Sbjct: 67 AAVVGLTAATWGTLYLFGREAALQLAALSELLPNAWRALQGELSRSVLGAYILDDLRSLQ 126 Query: 184 LGTATAPVASYVAALFGSVFRTAAYIAVLLFAALYFAVQPTRYLDGLLRLVPAPRRDGAR 243 A + L A ++LFA LY A P+ YL GLL+LVPA R A Sbjct: 127 --HADGLIVQLGPRLIRGSASAGAAAVIVLFAGLYLAYNPSTYLGGLLKLVPARGRQRAE 184 Query: 244 EMLELLGTTLKRWIIGQSITMAVVGTLTAIGLALLGVTAPIALGLISGMFAFVPYVGPIL 303 E+ + G L RW++GQ I+M +VG T +GL L GV +P+ALG+++G+ FVP VGP++ Sbjct: 185 EVFKACGKALNRWLVGQLISMMLVGVTTGVGLWLAGVPSPLALGVVAGLGQFVPVVGPMV 244 Query: 304 ASVSGILVASMQGPVLVGYVVALYAGIHFVEGNLITPLVQAEAIELPPVLTLFATLVFGL 363 + + G+++A+ G + + +Y G E N+ITPLV + +ELP +TLFA L G+ Sbjct: 245 SMIPGLIIAAGAGWETLAWTAVVYVGAMQAEANVITPLVLRQMVELPMAVTLFAVLAMGV 304 Query: 364 LLGPVGVLLAAPLAVVLLVAVNALYIEGILGERRAWPSAPLNKPASDEA 412 LLGP+GVL A PLAVV V V +Y+E +LGER P P +P A Sbjct: 305 LLGPLGVLFATPLAVVAYVVVRMIYVEDLLGERP--PERPTERPTERPA 351 >ref|YP_001820769.1| hypothetical protein Oter_3895 [Opitutus terrae PB90-1] gb|ACB77169.1| protein of unknown function UPF0118 [Opitutus terrae PB90-1] Length = 340 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 133/339 (39%), Positives = 202/339 (59%), Gaps = 6/339 (1%) Query: 61 PTAPSFERAL-LVLSVVGVAGFA--VWKLSDVLVLALGAALLALLLRGLAHELSRRTRIP 117 P++P+ R +L +G+ A +W ++D +V+A G +LA +L L+ LSR+T + Sbjct: 2 PSSPTTSRGTRTILIAIGLVALAAVLWLIADAIVVAFGGIVLASVLLSLSGPLSRKTHLG 61 Query: 118 EAWAVVPVVLFLFGSIVAVGWLFGSQIASQFNLLAKDLPQSLTQLVHEFGSSSWGAWFLG 177 W+++ VV + ++ A+ WLFG++I +QF L + LP++L ++ G S G + Sbjct: 62 ARWSLLIVVALMLVAVAALSWLFGNEIVTQFGELQRQLPEALHKVEQWLGQSPAGRMVVD 121 Query: 178 HAQDINLGTATAPVASYVAALFGSVFRTAAYIAVLLFAALYFAVQPTRYLDGLLRLVPAP 237 + + T S A GSVF AA + ++LF +YFA P Y DG LRLVP Sbjct: 122 SVRQVGGNTEAL---SQAGAFVGSVFGAAANLLLVLFLGVYFAADPQLYRDGALRLVPPR 178 Query: 238 RRDGAREMLELLGTTLKRWIIGQSITMAVVGTLTAIGLALLGVTAPIALGLISGMFAFVP 297 RR R L+ G L++W++ Q+I M VG LT + L L+GV ++LG+++G+ FVP Sbjct: 179 RRPQLRRALDDAGVALRKWLVAQAIAMLAVGVLTGVALGLIGVPLALSLGVLAGLLEFVP 238 Query: 298 YVGPILASVSGILVASMQGPVLVGYVVALYAGIHFVEGNLITPLVQAEAIELPPVLTLFA 357 +GPI+A+V G+L+A GP V Y +Y + +E N+ITPLVQ A++LPPVL L A Sbjct: 239 VIGPIVAAVPGLLLAFSHGPNTVLYAALVYVAVQQIESNVITPLVQRWAVKLPPVLGLLA 298 Query: 358 TLVFGLLLGPVGVLLAAPLAVVLLVAVNALYIEGILGER 396 + FGLLLG GV+ A PLAVV++V V LY+E L + Sbjct: 299 IVAFGLLLGVPGVIFAMPLAVVVMVLVKDLYVEDTLEAK 337 >ref|YP_004087601.1| hypothetical protein Astex_1784 [Asticcacaulis excentricus CB 48] gb|ADU13450.1| protein of unknown function UPF0118 [Asticcacaulis excentricus CB 48] Length = 352 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 131/341 (38%), Positives = 203/341 (59%), Gaps = 3/341 (0%) Query: 58 RTKPTAPSFERALLVLSVVGVAGFAVWKLSDVLVLALGAALLALLLRGLAHELSRRTRIP 117 R + A ++ L +L VVG++ A +KL + +L GA ++A +LR A L + ++ Sbjct: 5 RNRLDAGFVQKTLFLLMVVGLSLLA-FKLIGIWLLVFGAVVVATVLRATAEPLVKYLKLR 63 Query: 118 EAWAVVPVVLFLFGSIVAVGWLFGSQIASQFNLLAKDLPQSLTQLVHEFGSSSWGAWFLG 177 + WAV+ +LFL + A GWLFGS+I Q N L+++LP++ QL +S GA L Sbjct: 64 DNWAVLLALLFLVSFLSASGWLFGSEIVRQTNNLSRELPEAWAQLQERLRASEAGATVLD 123 Query: 178 HAQDINLGTATAPVASYVAALFGSVFRTAAYIAVLLFAALYFAVQPTRYLDGLLRLVPAP 237 NLG + V S V + G + + A + V++ A ++ A+ P Y DG++RL P Sbjct: 124 QIN--NLGQQASGVLSLVPKIAGEIASSIANLVVVVVAGIFMAMHPRSYRDGVVRLFPKS 181 Query: 238 RRDGAREMLELLGTTLKRWIIGQSITMAVVGTLTAIGLALLGVTAPIALGLISGMFAFVP 297 ++D R+ L L G L+ W++GQ +M +VG+LTAIGL++ GV + ALGL+SG+ FVP Sbjct: 182 QKDRVRDGLNLSGKALRLWLLGQLFSMVLVGSLTAIGLSIAGVPSAGALGLMSGLAQFVP 241 Query: 298 YVGPILASVSGILVASMQGPVLVGYVVALYAGIHFVEGNLITPLVQAEAIELPPVLTLFA 357 VGP++++ G+L+A+ + + +Y G+ +E N+ITP+VQ +P V+TLFA Sbjct: 242 IVGPVVSAGPGLLLAASENMTTFIAALVIYVGVSQLESNIITPMVQKHVAAVPTVITLFA 301 Query: 358 TLVFGLLLGPVGVLLAAPLAVVLLVAVNALYIEGILGERRA 398 L FG LLGP+GVL A PL VV V Y+ +LG+ A Sbjct: 302 VLGFGSLLGPLGVLFATPLTVVAHTLVMKFYVGEVLGDHGA 342 >ref|ZP_08179375.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gb|EGD08391.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 346 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 135/336 (40%), Positives = 201/336 (59%), Gaps = 9/336 (2%) Query: 68 RALLVLSVVGVAGFAVWKLSDVLVLALGAALLALLLRGLAHELSRRTRIPEAWAVVPVVL 127 R ++VL++V A + +W LSD+L++ GA ++A+LLR ++ L+RRTR+ + WA+ VV+ Sbjct: 12 RVIVVLALVACA-WMLWTLSDLLLMVFGAIVVAVLLRAVSSWLTRRTRLSDGWALALVVI 70 Query: 128 FLFGSIVAVGWLFGSQIASQFNLLAKDLPQSLTQLVHEFGSSSWGAWFLGHAQDINLGTA 187 L A+ WLFGSQ+AS+ L + LPQ+ T+ VH++ ++ LG A + A Sbjct: 71 VLTAGFSALLWLFGSQLASEVGALQRTLPQAWTR-VHDWLAAG----PLGPAVEELTRQA 125 Query: 188 TAPVASYV---AALFGSVFRTAAYIAVLLFAALYFAVQPTRYLDGLLRLVPAPRRDGARE 244 A V++ A S+ A + ++L A+Y A QP Y G L L+PA R + Sbjct: 126 PARVSNLAPRAGAFALSITGGVANLFLVLVGAVYLAAQPHLYRRGALLLLPAHVRATTDD 185 Query: 245 MLELLGTTLKRWIIGQSITMAVVGTLTAIGLALLGVTAPIALGLISGMFAFVPYVGPILA 304 L+ GT L+ W+ GQ I M VVG LT +GL LG+ +ALG+++G+ FVP VGPILA Sbjct: 186 ALQASGTALRLWLRGQLIAMVVVGALTGLGLWALGIPGALALGIVAGLLDFVPIVGPILA 245 Query: 305 SVSGILVASMQGPVLVGYVVALYAGIHFVEGNLITPLVQAEAIELPPVLTLFATLVFGLL 364 ++ IL+ P + AL+ + +EGNL+ PL+Q ++LPPVL LF+ G+L Sbjct: 246 AIPAILLGFTVSPQMALATAALFVVVQQIEGNLLLPLIQQRTVDLPPVLLLFSLFGIGML 305 Query: 365 LGPVGVLLAAPLAVVLLVAVNALYIEGILGERRAWP 400 LGP GVLLAAPL VV V + LY++ LG + P Sbjct: 306 LGPPGVLLAAPLTVVGYVLIKRLYVQEALGTPTSIP 341