BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0014.p (189 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_577212.1| hypothetical protein Nham_1948 [Nitrobacter ham... 259 1e-67 ref|YP_001239435.1| putative UspA stress protein [Bradyrhizobium... 258 3e-67 ref|ZP_01045924.1| Universal stress protein, UspA [Nitrobacter s... 248 3e-64 ref|YP_002289774.1| UspA [Oligotropha carboxidovorans OM5] >gi|3... 233 1e-59 ref|YP_317638.1| universal stress protein UspA [Nitrobacter wino... 226 1e-57 >ref|YP_577212.1| hypothetical protein Nham_1948 [Nitrobacter hamburgensis X14] gb|ABE62752.1| UspA [Nitrobacter hamburgensis X14] Length = 279 Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 126/189 (66%), Positives = 154/189 (81%) Query: 1 LHEIIREKSLSHRVPERLVEYARLRDLAIVSVPESYDQWNAEAIIFGSGRPTLVLPESAP 60 LHE I E+ ++++V + VEY+RLRDL I+SVP+SY+QW AEA+IFGSG+PTLVLPE Sbjct: 91 LHEKILERCVTYKVSDTFVEYSRLRDLTIISVPDSYNQWYAEAVIFGSGKPTLVLPERHR 150 Query: 61 SGPFELNTVVVAWDFSRSAARAVADAIPMLEKAKRVHVVTVTNEKVIDTEHSSEELAKNL 120 + FEL TVVVAWDFSR+AARA+ADA+P+LEKA++V VVTV NEK + +S+EE+AKN+ Sbjct: 151 TNWFELKTVVVAWDFSRTAARAIADAMPVLEKAQQVRVVTVFNEKALGARNSAEEVAKNI 210 Query: 121 SRHGVDVTLDRVDAAGRWIGDVLTREVASHNADMLVMGAYGHSRFREFILGGATKSMLSK 180 SRHGV VTLD V AA R IG+VL AS AD LVMGAYGHSR REFILGGAT+S+L+ Sbjct: 211 SRHGVYVTLDEVGAAARTIGEVLESHAASCGADALVMGAYGHSRLREFILGGATRSLLAS 270 Query: 181 PLLPILFSH 189 P LPILFSH Sbjct: 271 PPLPILFSH 279 >ref|YP_001239435.1| putative UspA stress protein [Bradyrhizobium sp. BTAi1] gb|ABQ35529.1| putative UspA stress protein [Bradyrhizobium sp. BTAi1] Length = 278 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 123/189 (65%), Positives = 151/189 (79%) Query: 1 LHEIIREKSLSHRVPERLVEYARLRDLAIVSVPESYDQWNAEAIIFGSGRPTLVLPESAP 60 LHE+I E+ L+ VP LVEYARLRDL IV VP+SYDQW AEA+I GSGRPTL +PE+ Sbjct: 90 LHEVILERCLTSEVPGLLVEYARLRDLTIVPVPQSYDQWYAEAVICGSGRPTLAVPEAPL 149 Query: 61 SGPFELNTVVVAWDFSRSAARAVADAIPMLEKAKRVHVVTVTNEKVIDTEHSSEELAKNL 120 +LN V+VAWDFSR AARAV+DA+P+LEKA+ V ++T+T EK I + S ELAKNL Sbjct: 150 PREGDLNRVLVAWDFSRGAARAVSDAVPILEKAREVCILTITKEKAISSRRSPSELAKNL 209 Query: 121 SRHGVDVTLDRVDAAGRWIGDVLTREVASHNADMLVMGAYGHSRFREFILGGATKSMLSK 180 SRHG++V +D VDAAGR IGDVL ++ S D+LVMGAYGHSRFREFILGGAT+S+L+K Sbjct: 210 SRHGINVIVDEVDAAGRGIGDVLAAQIESRRPDILVMGAYGHSRFREFILGGATRSILTK 269 Query: 181 PLLPILFSH 189 P +P+LFSH Sbjct: 270 PPIPVLFSH 278 >ref|ZP_01045924.1| Universal stress protein, UspA [Nitrobacter sp. Nb-311A] gb|EAQ36008.1| Universal stress protein, UspA [Nitrobacter sp. Nb-311A] Length = 279 Score = 248 bits (633), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 120/188 (63%), Positives = 145/188 (77%) Query: 2 HEIIREKSLSHRVPERLVEYARLRDLAIVSVPESYDQWNAEAIIFGSGRPTLVLPESAPS 61 HE I EK +HR LV YARLRDL I+ VPESYD W AE IIF SGRP L++P S Sbjct: 92 HETIFEKCATHRTAALLVGYARLRDLTIMPVPESYDLWCAEEIIFESGRPALIVPAPPRS 151 Query: 62 GPFELNTVVVAWDFSRSAARAVADAIPMLEKAKRVHVVTVTNEKVIDTEHSSEELAKNLS 121 G F+L+TV VAWDFSR+AARAV+DA+P+LEKAK+V V VTNEK D++HS EEL KNL+ Sbjct: 152 GSFQLDTVGVAWDFSRTAARAVSDALPLLEKAKKVRAVVVTNEKSFDSQHSPEELTKNLA 211 Query: 122 RHGVDVTLDRVDAAGRWIGDVLTREVASHNADMLVMGAYGHSRFREFILGGATKSMLSKP 181 RHG+DV +D VD+ GR IG+VL V SH D+LVMGAYG SR+RE +LGGAT+S+LSKP Sbjct: 212 RHGIDVIVDEVDSEGRPIGEVLEAYVLSHGIDLLVMGAYGQSRWREVVLGGATRSLLSKP 271 Query: 182 LLPILFSH 189 +P+ FSH Sbjct: 272 PIPVFFSH 279 >ref|YP_002289774.1| UspA [Oligotropha carboxidovorans OM5] ref|YP_004632235.1| universal stress protein family protein [Oligotropha carboxidovorans OM5] gb|ACI93909.1| UspA [Oligotropha carboxidovorans OM5] gb|AEI02418.1| universal stress protein family protein [Oligotropha carboxidovorans OM4] gb|AEI05994.1| universal stress protein family protein [Oligotropha carboxidovorans OM5] Length = 282 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 121/190 (63%), Positives = 144/190 (75%), Gaps = 3/190 (1%) Query: 3 EIIREKSLSHRVPERLVEYARLRDLAIVSVPES--YDQWNAEAIIFGSGRPTLVLPESAP 60 E I E+ L+ + LVE+ARLRDL IV VP+ DQW A++IIFGSGRPTLV P + Sbjct: 93 ERITEQCLTSDTADVLVEHARLRDLTIVPVPDGDHLDQWYAQSIIFGSGRPTLVTPHARK 152 Query: 61 -SGPFELNTVVVAWDFSRSAARAVADAIPMLEKAKRVHVVTVTNEKVIDTEHSSEELAKN 119 +G L+TV VAWDFSR AARAV DA+P+LEKAK+VH+VTVT+EK I + S++ELAKN Sbjct: 153 RTGALTLDTVAVAWDFSRPAARAVTDALPILEKAKQVHIVTVTHEKNISSRRSADELAKN 212 Query: 120 LSRHGVDVTLDRVDAAGRWIGDVLTREVASHNADMLVMGAYGHSRFREFILGGATKSMLS 179 L H V VTLD VDA GR IG+ LT V S NAD+LVMGAYGHSR R+FILGGATKSM+S Sbjct: 213 LLSHDVQVTLDTVDAGGRGIGETLTSYVDSVNADILVMGAYGHSRLRDFILGGATKSMVS 272 Query: 180 KPLLPILFSH 189 KP +PI SH Sbjct: 273 KPPVPIFLSH 282 >ref|YP_317638.1| universal stress protein UspA [Nitrobacter winogradskyi Nb-255] gb|ABA04286.1| Universal stress protein, UspA [Nitrobacter winogradskyi Nb-255] Length = 279 Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 108/187 (57%), Positives = 139/187 (74%) Query: 2 HEIIREKSLSHRVPERLVEYARLRDLAIVSVPESYDQWNAEAIIFGSGRPTLVLPESAPS 61 HE I EK +H+ P LVEYARLRDL I+ PE++D W AE IIF SGRPTL+LP S Sbjct: 92 HEAILEKCAAHKTPAMLVEYARLRDLTIMPEPEAFDLWYAEEIIFESGRPTLILPTVPLS 151 Query: 62 GPFELNTVVVAWDFSRSAARAVADAIPMLEKAKRVHVVTVTNEKVIDTEHSSEELAKNLS 121 P + ++ VAWDFSR+A RAV+DA+P+LEKA++V + V NEK +++ S +ELA+NL+ Sbjct: 152 RPIQFGSIGVAWDFSRTATRAVSDALPLLEKAEKVCIFIVRNEKSFNSQRSPDELAENLA 211 Query: 122 RHGVDVTLDRVDAAGRWIGDVLTREVASHNADMLVMGAYGHSRFREFILGGATKSMLSKP 181 RHG+D LD VDA GR IG+V V S D+LVMGAYG SR+REF+LGGAT+S+LSKP Sbjct: 212 RHGIDAVLDEVDADGRPIGEVFRAYVLSRGIDLLVMGAYGQSRWREFVLGGATRSLLSKP 271 Query: 182 LLPILFS 188 +P+ FS Sbjct: 272 PVPVFFS 278