BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0003.p (247 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_577167.1| phosphoribosylpyrophosphate synthetase [Nitroba... 294 7e-78 ref|NP_769756.1| phosphoribosylpyrophosphate synthetase [Bradyrh... 292 3e-77 ref|YP_783053.1| phosphoribosylpyrophosphate synthetase [Rhodops... 280 1e-73 ref|YP_568580.1| phosphoribosylpyrophosphate synthetase [Rhodops... 280 1e-73 ref|YP_003693124.1| ribose-phosphate pyrophosphokinase [Starkeya... 272 4e-71 >ref|YP_577167.1| phosphoribosylpyrophosphate synthetase [Nitrobacter hamburgensis X14] gb|ABE62707.1| ribose-phosphate pyrophosphokinase [Nitrobacter hamburgensis X14] Length = 306 Score = 294 bits (753), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 141/236 (59%), Positives = 181/236 (76%) Query: 1 MTCAAIQWMPTSVAIGRQLAERLGVPGHEIVLHRFPDGELRVTVGPAAPTTIICCSLNDP 60 M+ AIQ++PTS + ++LA +LGV HEI LH FPDGE+RVT GPA T I+ SL+ P Sbjct: 1 MSDIAIQYLPTSASDAKRLALQLGVSAHEITLHHFPDGEMRVTAGPATSTVIVYASLHRP 60 Query: 61 NEKLIALLFAAEALRRGGARRLVLVAPYLGYMRQDAAFYAGEAISQRAIGDLFAKTVDRV 120 N+KLIALLFAAE+LRR G++RLVL+APY YMRQD+AF+AGEAISQR IG L TVDRV Sbjct: 61 NDKLIALLFAAESLRRQGSKRLVLLAPYFCYMRQDSAFHAGEAISQRVIGKLIVDTVDRV 120 Query: 121 ITVEAHLHRTATLNHVFPGIETDNLTAASVIESMLRADTLDPTTLVVGPDTESRPWVSDL 180 ITV+AHLHRT+ + FPGIE DNL+A I S LR++ + P T+V+GPD E+R WVS L Sbjct: 121 ITVDAHLHRTSDIRAAFPGIEADNLSAIPAIMSALRSENIHPATVVIGPDFEARQWVSRL 180 Query: 181 AGRLGLAFAVGEKIRRGDRSVQIVFSDPAPLLQRPVVLVDDIVSSGGTLIGCAEAL 236 A LGL + V +K+R D+SV++ F++P+ RP +++DDIVSSGGTLI CA+AL Sbjct: 181 AECLGLTYTVAQKVRYSDQSVELRFANPSMFAGRPALIIDDIVSSGGTLIACAKAL 236 >ref|NP_769756.1| phosphoribosylpyrophosphate synthetase [Bradyrhizobium japonicum USDA 110] dbj|BAC48381.1| bll3116 [Bradyrhizobium japonicum USDA 110] Length = 306 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 148/236 (62%), Positives = 177/236 (75%) Query: 1 MTCAAIQWMPTSVAIGRQLAERLGVPGHEIVLHRFPDGELRVTVGPAAPTTIICCSLNDP 60 M+ A Q +P ++LA RLG+ E+ LHRFPDGELRVTV PAA TTI+ +L+ P Sbjct: 1 MSMIAFQTLPFGTEAAKRLAARLGLASDEMTLHRFPDGELRVTVAPAADTTILYAALDQP 60 Query: 61 NEKLIALLFAAEALRRGGARRLVLVAPYLGYMRQDAAFYAGEAISQRAIGDLFAKTVDRV 120 N+KLIALLFAAEALRRGGA+RLVLVAPYL YMRQD AF+AGEAISQRA+G L A VDRV Sbjct: 61 NDKLIALLFAAEALRRGGAKRLVLVAPYLCYMRQDIAFHAGEAISQRAMGTLLATIVDRV 120 Query: 121 ITVEAHLHRTATLNHVFPGIETDNLTAASVIESMLRADTLDPTTLVVGPDTESRPWVSDL 180 +TV+AHLHRT + VFPGIE +NL+A I + L A +DP T+V+GPD ES PWV DL Sbjct: 121 VTVDAHLHRTPDIAAVFPGIEAENLSAMPAIANALVAAGIDPATVVIGPDAESEPWVRDL 180 Query: 181 AGRLGLAFAVGEKIRRGDRSVQIVFSDPAPLLQRPVVLVDDIVSSGGTLIGCAEAL 236 AGRL L V K+RRGDRSV+I F+D A L RP ++VDDIVSSG TL+ A+ L Sbjct: 181 AGRLDLQHTVARKLRRGDRSVEIDFADAALLAGRPALMVDDIVSSGTTLMVAAKTL 236 >ref|YP_783053.1| phosphoribosylpyrophosphate synthetase [Rhodopseudomonas palustris BisA53] gb|ABJ08073.1| ribose-phosphate pyrophosphokinase [Rhodopseudomonas palustris BisA53] Length = 302 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 150/236 (63%), Positives = 175/236 (74%), Gaps = 1/236 (0%) Query: 1 MTCAAIQWMPTSVAIGRQLAERLGVPGHEIVLHRFPDGELRVTVGPAAPTTIICCSLNDP 60 MT I +P S+ ++LA RLGVP I LHRFPDGELRV VG APTT+I SL+ P Sbjct: 1 MTGFRIAALPDSLDAAQRLATRLGVPCEAIELHRFPDGELRVRVGEVAPTTLIHASLDRP 60 Query: 61 NEKLIALLFAAEALRRGGARRLVLVAPYLGYMRQDAAFYAGEAISQRAIGDLFAKTVDRV 120 N+KLIALLFAAEALRRGGARRLVL++PYL YMRQD AF+ GEAISQR IG LF DR+ Sbjct: 61 NDKLIALLFAAEALRRGGARRLVLLSPYLCYMRQDTAFHPGEAISQRVIGKLFVDNFDRI 120 Query: 121 ITVEAHLHRTATLNHVFPGIETDNLTAASVIESMLRADTLDPTTLVVGPDTESRPWVSDL 180 ITV+AHLHRT + VF GIE NL+AA + + L DP T+VVGPD+ES PWV DL Sbjct: 121 ITVDAHLHRTPQIGRVFDGIEAQNLSAAPALAAALAGSN-DPRTIVVGPDSESLPWVRDL 179 Query: 181 AGRLGLAFAVGEKIRRGDRSVQIVFSDPAPLLQRPVVLVDDIVSSGGTLIGCAEAL 236 AGRLG +AV EK RRGDR V++ F++ A RPV+LVDDIVSSGGTLI CA+ L Sbjct: 180 AGRLGCDYAVAEKTRRGDRVVEVGFAEAARFAGRPVLLVDDIVSSGGTLIACAQQL 235 >ref|YP_568580.1| phosphoribosylpyrophosphate synthetase [Rhodopseudomonas palustris BisB5] gb|ABE38679.1| ribose-phosphate pyrophosphokinase [Rhodopseudomonas palustris BisB5] Length = 304 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 143/228 (62%), Positives = 169/228 (74%) Query: 5 AIQWMPTSVAIGRQLAERLGVPGHEIVLHRFPDGELRVTVGPAAPTTIICCSLNDPNEKL 64 AIQ + ++ +L RLGVP H I HRFPDGE+ VTVGPAA TTI+ L+ PN+KL Sbjct: 4 AIQCLASTADDATRLGARLGVPVHRIAQHRFPDGEIAVTVGPAAATTILYLPLDQPNDKL 63 Query: 65 IALLFAAEALRRGGARRLVLVAPYLGYMRQDAAFYAGEAISQRAIGDLFAKTVDRVITVE 124 + +LFAAEALRR G RLVL+APYL YMRQD AF+ GEAISQRA+G L A VDRVITV+ Sbjct: 64 LTILFAAEALRRDGCSRLVLLAPYLCYMRQDIAFHPGEAISQRAVGSLLAGLVDRVITVD 123 Query: 125 AHLHRTATLNHVFPGIETDNLTAASVIESMLRADTLDPTTLVVGPDTESRPWVSDLAGRL 184 AHLHRTATL VFPGI ++L+A I + LR L PTT+VVGPD+ES+PWV LAG + Sbjct: 124 AHLHRTATLGEVFPGIVANDLSAMPAIAAALRQSRLAPTTIVVGPDSESQPWVDTLAGLI 183 Query: 185 GLAFAVGEKIRRGDRSVQIVFSDPAPLLQRPVVLVDDIVSSGGTLIGC 232 G AV KIR GDRSV+I F DPA + RP +L+DDIVSSGGTLI C Sbjct: 184 GAHSAVARKIRHGDRSVEIAFDDPARIAGRPALLIDDIVSSGGTLIAC 231 >ref|YP_003693124.1| ribose-phosphate pyrophosphokinase [Starkeya novella DSM 506] gb|ADH88505.1| ribose-phosphate pyrophosphokinase [Starkeya novella DSM 506] Length = 301 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 139/243 (57%), Positives = 171/243 (70%) Query: 1 MTCAAIQWMPTSVAIGRQLAERLGVPGHEIVLHRFPDGELRVTVGPAAPTTIICCSLNDP 60 MT A+Q++P + +LA +G+ HEI LHRFPD E VTVGPAA TTII SL+ P Sbjct: 1 MTSVALQYLPGAGRDAMRLARSMGIAAHEIALHRFPDEEFLVTVGPAAATTIIYSSLDRP 60 Query: 61 NEKLIALLFAAEALRRGGARRLVLVAPYLGYMRQDAAFYAGEAISQRAIGDLFAKTVDRV 120 NEKL+ALL A EALRR GA RLVLVAPY+ YMRQDAAF G+AISQRAIG L A DR+ Sbjct: 61 NEKLVALLLAVEALRREGAERLVLVAPYMCYMRQDAAFEPGQAISQRAIGKLLADVFDRI 120 Query: 121 ITVEAHLHRTATLNHVFPGIETDNLTAASVIESMLRADTLDPTTLVVGPDTESRPWVSDL 180 ++V AHLHR A + VFPG + D+L+A + L + D T+VVGPD ESR WV+DL Sbjct: 121 VSVNAHLHRVADIQAVFPGGDADDLSAMPAVADTLSSVGYDQGTIVVGPDAESRRWVADL 180 Query: 181 AGRLGLAFAVGEKIRRGDRSVQIVFSDPAPLLQRPVVLVDDIVSSGGTLIGCAEALXHPA 240 A RL L AV K+RRGD +V I F++ A RPV++VDDIVSSGGTLI CA+AL Sbjct: 181 AERLHLDVAVATKVRRGDETVDIGFANDAMFAGRPVLIVDDIVSSGGTLIACAKALARAG 240 Query: 241 SAQ 243 +++ Sbjct: 241 ASK 243