BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0005.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774941.1| transposase [Bradyrhizobium japonicum USDA 110]... 316 6e-85 ref|ZP_08530555.1| transposase IS116/IS110/IS902 [Agrobacterium ... 130 1e-28 ref|YP_004144829.1| transposase IS116/IS110/IS902 family protein... 125 2e-27 sp|P55498.1|Y4IO_RHISN RecName: Full=Uncharacterized protein y4iO 124 3e-27 ref|NP_659850.1| insertion sequence transposase protein [Rhizobi... 122 1e-26 >ref|NP_774941.1| transposase [Bradyrhizobium japonicum USDA 110] dbj|BAC53566.1| blr8301 [Bradyrhizobium japonicum USDA 110] Length = 321 Score = 316 bits (810), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 154/154 (100%), Positives = 154/154 (100%) Query: 1 VPSPDDEDRRRITRERMVLMQERIQHSNRIKGLLFSQGVTDYDPLRRGRRERFEAVRTGD 60 VPSPDDEDRRRITRERMVLMQERIQHSNRIKGLLFSQGVTDYDPLRRGRRERFEAVRTGD Sbjct: 168 VPSPDDEDRRRITRERMVLMQERIQHSNRIKGLLFSQGVTDYDPLRRGRRERFEAVRTGD 227 Query: 61 GRDLPQHMKRQFDRDQGIGKSGNTRLRSTLLEMAWLWLRHQPGSALSRWFNERVAQNGGR 120 GRDLPQHMKRQFDRDQGIGKSGNTRLRSTLLEMAWLWLRHQPGSALSRWFNERVAQNGGR Sbjct: 228 GRDLPQHMKRQFDRDQGIGKSGNTRLRSTLLEMAWLWLRHQPGSALSRWFNERVAQNGGR 287 Query: 121 FKKVMITALARKLIVALWKYVSAGVVIEGAIVRP 154 FKKVMITALARKLIVALWKYVSAGVVIEGAIVRP Sbjct: 288 FKKVMITALARKLIVALWKYVSAGVVIEGAIVRP 321 >ref|ZP_08530555.1| transposase IS116/IS110/IS902 [Agrobacterium sp. ATCC 31749] gb|EGL62730.1| transposase IS116/IS110/IS902 [Agrobacterium sp. ATCC 31749] Length = 388 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/81 (71%), Positives = 72/81 (88%) Query: 73 DRDQGIGKSGNTRLRSTLLEMAWLWLRHQPGSALSRWFNERVAQNGGRFKKVMITALARK 132 +R+QG+ K+GN RLR+T++E+AWLWLRHQP S LS WF +R+AQNGGR KK MI ALARK Sbjct: 306 NREQGVSKAGNPRLRATMVELAWLWLRHQPTSTLSCWFKKRIAQNGGRLKKPMIVALARK 365 Query: 133 LIVALWKYVSAGVVIEGAIVR 153 L+VALWKYVS+GVVIEGAI++ Sbjct: 366 LLVALWKYVSSGVVIEGAIMK 386 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 40/72 (55%), Positives = 55/72 (76%) Query: 4 PDDEDRRRITRERMVLMQERIQHSNRIKGLLFSQGVTDYDPLRRGRRERFEAVRTGDGRD 63 P++ED RRI RER L+ ER+ H NRIKGLLF+QG+ +Y+P+ R RR+R E +RTGDGR Sbjct: 153 PEEEDNRRIGRERKTLIAERVFHVNRIKGLLFTQGIREYEPVNRDRRQRLEELRTGDGRP 212 Query: 64 LPQHMKRQFDRD 75 L +H+K + R+ Sbjct: 213 LSKHLKAEVCRE 224 >ref|YP_004144829.1| transposase IS116/IS110/IS902 family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] ref|YP_004614760.1| transposase IS116/IS110/IS902 family protein [Mesorhizobium opportunistum WSM2075] gb|ADV14779.1| transposase IS116/IS110/IS902 family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|AEH90666.1| transposase IS116/IS110/IS902 family protein [Mesorhizobium opportunistum WSM2075] Length = 386 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 57/81 (70%), Positives = 68/81 (83%) Query: 72 FDRDQGIGKSGNTRLRSTLLEMAWLWLRHQPGSALSRWFNERVAQNGGRFKKVMITALAR 131 D +QG+ KSGN +LR+TL++MAWLW+RHQP SAL+ WF ERV QN GR KK MI ALAR Sbjct: 303 IDHEQGVSKSGNPKLRTTLVQMAWLWVRHQPRSALTLWFKERVKQNDGRLKKTMIVALAR 362 Query: 132 KLIVALWKYVSAGVVIEGAIV 152 KL+VALWKYV+ GVVIEGAI+ Sbjct: 363 KLLVALWKYVNVGVVIEGAIM 383 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/75 (62%), Positives = 59/75 (78%) Query: 1 VPSPDDEDRRRITRERMVLMQERIQHSNRIKGLLFSQGVTDYDPLRRGRRERFEAVRTGD 60 VP+P +EDRRRI RER L ER +H NR+KGLLF+QG++ Y+PLRR RRER E ++TGD Sbjct: 149 VPTPKEEDRRRIARERKALTNERTRHINRLKGLLFAQGISGYEPLRRDRRERLEELKTGD 208 Query: 61 GRDLPQHMKRQFDRD 75 GR LP H+KRQ R+ Sbjct: 209 GRPLPVHLKRQIGRE 223 >sp|P55498.1|Y4IO_RHISN RecName: Full=Uncharacterized protein y4iO Length = 252 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 54/81 (66%), Positives = 71/81 (87%) Query: 72 FDRDQGIGKSGNTRLRSTLLEMAWLWLRHQPGSALSRWFNERVAQNGGRFKKVMITALAR 131 DR+QG+ K+GN RLR+ ++++AWLWLRHQPGSAL+RWF ER++ +GGR KKV I ALAR Sbjct: 169 IDREQGVSKAGNPRLRTMMIQLAWLWLRHQPGSALTRWFYERISHSGGRGKKVAIVALAR 228 Query: 132 KLIVALWKYVSAGVVIEGAIV 152 KL+VALWKY ++GVVIEGA++ Sbjct: 229 KLLVALWKYATSGVVIEGAVM 249 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/75 (64%), Positives = 57/75 (76%) Query: 1 VPSPDDEDRRRITRERMVLMQERIQHSNRIKGLLFSQGVTDYDPLRRGRRERFEAVRTGD 60 VP+ DDEDRRRI RER L++ER +H NRIKGLLFS GV Y+P RR RRER + +RTGD Sbjct: 16 VPAVDDEDRRRIGRERKALIEERKRHVNRIKGLLFSVGVRGYEPTRRDRRERLDELRTGD 75 Query: 61 GRDLPQHMKRQFDRD 75 GR LP H+K Q R+ Sbjct: 76 GRQLPAHLKAQLSRE 90 >ref|NP_659850.1| insertion sequence transposase protein [Rhizobium etli CFN 42] ref|YP_471727.1| putative insertion sequence transposase protein [Rhizobium etli CFN 42] gb|AAM54863.1| probable insertion sequence transposase protein [Rhizobium etli CFN 42] gb|ABC93000.1| putative insertion sequence transposase protein [Rhizobium etli CFN 42] Length = 388 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 53/86 (61%), Positives = 71/86 (82%) Query: 68 MKRQFDRDQGIGKSGNTRLRSTLLEMAWLWLRHQPGSALSRWFNERVAQNGGRFKKVMIT 127 M D +QG+ K+GN RLR+T+++++WLWLR+QP SALSRWF +RV NGGR KK I Sbjct: 301 MSGTIDHEQGVSKAGNPRLRTTMIQLSWLWLRNQPASALSRWFVDRVQSNGGRLKKAAIV 360 Query: 128 ALARKLIVALWKYVSAGVVIEGAIVR 153 ALARKL++ALWK+V+AGVVIEGA+++ Sbjct: 361 ALARKLLIALWKFVTAGVVIEGAVMK 386 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 45/72 (62%), Positives = 59/72 (81%) Query: 2 PSPDDEDRRRITRERMVLMQERIQHSNRIKGLLFSQGVTDYDPLRRGRRERFEAVRTGDG 61 P P DEDRRRI RER VL+ ER++H NR+KGLLF+QGV+ Y PLR+ RR+R E ++TGDG Sbjct: 148 PDPKDEDRRRICRERKVLIAERVRHVNRVKGLLFAQGVSGYQPLRKDRRQRLEELQTGDG 207 Query: 62 RDLPQHMKRQFD 73 R+LP+H+K Q + Sbjct: 208 RELPKHLKAQIN 219