BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0004.p         (54 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774940.1| hypothetical protein blr8300 [Bradyrhizobium ja...    97   1e-18
ref|NP_766704.1| hypothetical protein bll0064 [Bradyrhizobium ja...    94   7e-18
ref|YP_002277133.1| hypothetical protein Gdia_2785 [Gluconacetob...    93   1e-17
gb|AAG60914.1|AF322013_33 ID498 [Bradyrhizobium japonicum]             93   2e-17
ref|NP_768575.1| hypothetical protein blr1935 [Bradyrhizobium ja...    92   2e-17

>ref|NP_774940.1| hypothetical protein blr8300 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53565.1| blr8300 [Bradyrhizobium japonicum USDA 110]
          Length = 355

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/51 (94%), Positives = 50/51 (98%)

Query: 1   MATLIDRAQEAGIEVIVLSPRLGDFNEDLRLLGFDALRAASRVQIAAQDIA 51
           MATLIDRAQEAGIE IV+SPRLGDFNEDLRLLGFDALRAASRVQIAAQD+A
Sbjct: 298 MATLIDRAQEAGIEAIVISPRLGDFNEDLRLLGFDALRAASRVQIAAQDVA 348


>ref|NP_766704.1| hypothetical protein bll0064 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45329.1| bll0064 [Bradyrhizobium japonicum USDA 110]
          Length = 352

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/51 (90%), Positives = 50/51 (98%)

Query: 1   MATLIDRAQEAGIEVIVLSPRLGDFNEDLRLLGFDALRAASRVQIAAQDIA 51
           MATL+DRAQEAGIE IV+SP+LGDFNEDLRLLGFDALRAASRVQIAAQD+A
Sbjct: 295 MATLMDRAQEAGIEAIVISPQLGDFNEDLRLLGFDALRAASRVQIAAQDVA 345


>ref|YP_002277133.1| hypothetical protein Gdia_2785 [Gluconacetobacter diazotrophicus
           PAl 5]
 gb|ACI52518.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 353

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/51 (90%), Positives = 49/51 (96%)

Query: 1   MATLIDRAQEAGIEVIVLSPRLGDFNEDLRLLGFDALRAASRVQIAAQDIA 51
           MATLIDRAQEAGIE IV+SPRLGDFNED+RLLG DALRAASRVQIAAQD+A
Sbjct: 296 MATLIDRAQEAGIEAIVISPRLGDFNEDIRLLGIDALRAASRVQIAAQDVA 346


>gb|AAG60914.1|AF322013_33 ID498 [Bradyrhizobium japonicum]
          Length = 391

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/51 (90%), Positives = 49/51 (96%)

Query: 1   MATLIDRAQEAGIEVIVLSPRLGDFNEDLRLLGFDALRAASRVQIAAQDIA 51
           MATLIDRAQE GIE IV+SPRLGDFNEDLRLLGFDALRAASRVQIAA+D+A
Sbjct: 334 MATLIDRAQEVGIEPIVISPRLGDFNEDLRLLGFDALRAASRVQIAARDVA 384


>ref|NP_768575.1| hypothetical protein blr1935 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47200.1| blr1935 [Bradyrhizobium japonicum USDA 110]
          Length = 355

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/51 (90%), Positives = 49/51 (96%)

Query: 1   MATLIDRAQEAGIEVIVLSPRLGDFNEDLRLLGFDALRAASRVQIAAQDIA 51
           MATLIDRAQE GIE IV+SPRLGDFNEDLRLLGFDALRAASRVQIAA+D+A
Sbjct: 298 MATLIDRAQEVGIEPIVISPRLGDFNEDLRLLGFDALRAASRVQIAARDVA 348