BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0008.p (240 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08073084.1| fimbrial biogenesis outer membrane usher prot... 328 5e-88 ref|YP_004134244.1| fimbrial biogenesis outer membrane usher pro... 319 2e-85 ref|YP_004552189.1| fimbrial biogenesis outer membrane usher pro... 293 2e-77 ref|NP_107980.1| hypothetical protein mll7724 [Mesorhizobium lot... 283 2e-74 ref|YP_002540762.1| hypothetical protein Arad_7725 [Agrobacteriu... 281 4e-74 >ref|ZP_08073084.1| fimbrial biogenesis outer membrane usher protein [Methylocystis sp. ATCC 49242] gb|EFX99256.1| fimbrial biogenesis outer membrane usher protein [Methylocystis sp. ATCC 49242] Length = 823 Score = 328 bits (840), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 162/240 (67%), Positives = 190/240 (79%) Query: 1 VTDAMKSERLETGSYGARVRDSEGSIPDRSATASYRASFGRVEVGVQQYGSNTRATAQID 60 +T A+K+E+ E GSYG R+R+ EG DR A ASYRASF RVE VQQY + TRAT Q + Sbjct: 584 ITSAVKAEKREEGSYGWRLRNGEGYRTDRFAGASYRASFARVEANVQQYANQTRATGQAE 643 Query: 61 GSIAFAGGGVFFGNRIDDAFAVVNAGAPNVAVQYENRPVGVTDSRGLLLVPYLNSYQKNK 120 GSIA AGGGVFFGNRIDDAFAVV+AGAP+V VQYENRP+G T+ +G LLVPYLNSYQKNK Sbjct: 644 GSIAVAGGGVFFGNRIDDAFAVVDAGAPDVEVQYENRPIGRTNRQGKLLVPYLNSYQKNK 703 Query: 121 ISIDPKNLPVDADVPSTREVVVPADRSGVVVNFGISETPKAALVTFTDSKGKPLAVGAQG 180 +SIDPK++PVDADV +T E+VVPADR+GVVV FG+S+TPKAALV F DS GKPL VG +G Sbjct: 704 LSIDPKSVPVDADVTTTNEIVVPADRNGVVVKFGVSQTPKAALVAFVDSAGKPLRVGVRG 763 Query: 181 HLESGKQTFVIGYDGQGYISGLTDQNVATIDLPDGSSCRAAFGYAPKPGEQVAIKDVICQ 240 LES Q FVIGYDGQ YI L+DQN ID+ + SC A F YAP+ GEQ I+ VIC+ Sbjct: 764 RLESDGQPFVIGYDGQAYIRNLSDQNAVRIDVSEEGSCVAEFEYAPRAGEQTVIRGVICR 823 >ref|YP_004134244.1| fimbrial biogenesis outer membrane usher protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV15070.1| fimbrial biogenesis outer membrane usher protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 803 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 156/240 (65%), Positives = 186/240 (77%) Query: 1 VTDAMKSERLETGSYGARVRDSEGSIPDRSATASYRASFGRVEVGVQQYGSNTRATAQID 60 V D KS+RLE GS G R R SEG P+RSA ASYRA F R E GVQQYG + RATAQ+D Sbjct: 564 VADIAKSQRLEDGSIGWRARTSEGDTPNRSAAASYRARFARFEAGVQQYGKDVRATAQMD 623 Query: 61 GSIAFAGGGVFFGNRIDDAFAVVNAGAPNVAVQYENRPVGVTDSRGLLLVPYLNSYQKNK 120 G+IA AGGGVF NRIDDAFAVV GAP+V VQ++NRPVG T+ +G +LVP LNSY+ N Sbjct: 624 GAIAVAGGGVFATNRIDDAFAVVEVGAPDVDVQFQNRPVGKTNRQGRILVPGLNSYEPNT 683 Query: 121 ISIDPKNLPVDADVPSTREVVVPADRSGVVVNFGISETPKAALVTFTDSKGKPLAVGAQG 180 +SIDPKNLPV+ADVP+T+EVV+PADRSGVVV FG+SE P+AA+VT DS G PL G +G Sbjct: 684 VSIDPKNLPVNADVPATKEVVMPADRSGVVVKFGVSEAPEAAVVTLVDSTGTPLEAGLKG 743 Query: 181 HLESGKQTFVIGYDGQGYISGLTDQNVATIDLPDGSSCRAAFGYAPKPGEQVAIKDVICQ 240 +E+G + FVIGYDG+ YI GL+ QN ID DG+SC+A F Y P PG+QVAIKDV C+ Sbjct: 744 RMEAGSEEFVIGYDGEAYIRGLSAQNTVVIDRLDGTSCKADFFYTPAPGQQVAIKDVACR 803 >ref|YP_004552189.1| fimbrial biogenesis outer membrane usher protein [Sinorhizobium meliloti AK83] gb|AEG58265.1| fimbrial biogenesis outer membrane usher protein [Sinorhizobium meliloti AK83] Length = 805 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 147/239 (61%), Positives = 169/239 (70%) Query: 1 VTDAMKSERLETGSYGARVRDSEGSIPDRSATASYRASFGRVEVGVQQYGSNTRATAQID 60 V D KSE+ E GS G R R SEG + +R A+ SYRA F R E GVQQY + RAT Q+D Sbjct: 566 VADIAKSEQQENGSIGWRARTSEGDVANREASVSYRAPFARFEAGVQQYDGDVRATGQMD 625 Query: 61 GSIAFAGGGVFFGNRIDDAFAVVNAGAPNVAVQYENRPVGVTDSRGLLLVPYLNSYQKNK 120 G+IA AGGGVF NRIDDAFAVV+ G P V VQ +NRPVG T+ G +LVP LNSY+ N Sbjct: 626 GAIAVAGGGVFATNRIDDAFAVVDVGTPGVEVQQQNRPVGKTNRSGRILVPNLNSYEPNT 685 Query: 121 ISIDPKNLPVDADVPSTREVVVPADRSGVVVNFGISETPKAALVTFTDSKGKPLAVGAQG 180 +SIDPKNLPVDADVP+T+EVVVPADRSGVVV FG+SE P+AALVT D G PL G G Sbjct: 686 VSIDPKNLPVDADVPATKEVVVPADRSGVVVKFGVSEAPQAALVTIKDKNGIPLQAGLSG 745 Query: 181 HLESGKQTFVIGYDGQGYISGLTDQNVATIDLPDGSSCRAAFGYAPKPGEQVAIKDVIC 239 L+ + FVIGYDGQ YI GL QN + L GS C A F Y P+PG+QV I DV C Sbjct: 746 KLQGAGEEFVIGYDGQAYIRGLNAQNSIEVSLGGGSKCHAEFSYKPQPGKQVVINDVKC 804 >ref|NP_107980.1| hypothetical protein mll7724 [Mesorhizobium loti MAFF303099] dbj|BAB54125.1| mll7724 [Mesorhizobium loti MAFF303099] Length = 807 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 144/239 (60%), Positives = 177/239 (74%) Query: 1 VTDAMKSERLETGSYGARVRDSEGSIPDRSATASYRASFGRVEVGVQQYGSNTRATAQID 60 V D KSERLE GS G R R SEG P+RSA SYR+ RVE G+QQ+ + R TA++D Sbjct: 568 VADIAKSERLENGSIGWRARTSEGGTPNRSAAVSYRSPRARVETGIQQFDKSVRGTAEVD 627 Query: 61 GSIAFAGGGVFFGNRIDDAFAVVNAGAPNVAVQYENRPVGVTDSRGLLLVPYLNSYQKNK 120 G+IA AGGG+F NRIDDAFAVV+ G V VQ++NRPVGV++ +G +LVP LNSY+ N Sbjct: 628 GAIAVAGGGIFATNRIDDAFAVVDVGVAGVEVQHQNRPVGVSNRQGRILVPDLNSYEDNT 687 Query: 121 ISIDPKNLPVDADVPSTREVVVPADRSGVVVNFGISETPKAALVTFTDSKGKPLAVGAQG 180 ISIDP+NLPVDADVP TR++VVPA RSGVV++FG+S+ AALV+ D KG P+AVGA+G Sbjct: 688 ISIDPRNLPVDADVPETRKIVVPAGRSGVVLDFGVSKAADAALVSLVDGKGTPIAVGAKG 747 Query: 181 HLESGKQTFVIGYDGQGYISGLTDQNVATIDLPDGSSCRAAFGYAPKPGEQVAIKDVIC 239 +E + FVIGYDG+ YI L QN I+LPDG+SCRA F Y PG+QV IK VIC Sbjct: 748 RVEGADEEFVIGYDGEAYIRTLHRQNAVAIELPDGTSCRAEFAYRAIPGQQVVIKQVIC 806 >ref|YP_002540762.1| hypothetical protein Arad_7725 [Agrobacterium radiobacter K84] gb|ACM29167.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 804 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 143/239 (59%), Positives = 167/239 (69%) Query: 1 VTDAMKSERLETGSYGARVRDSEGSIPDRSATASYRASFGRVEVGVQQYGSNTRATAQID 60 V D KSE+ E GS G R R SEG +R A+ SYRA F R E GVQQY N RAT Q+D Sbjct: 565 VADISKSEQPEDGSIGWRARTSEGKDANRQASMSYRAPFARFEAGVQQYDGNVRATGQMD 624 Query: 61 GSIAFAGGGVFFGNRIDDAFAVVNAGAPNVAVQYENRPVGVTDSRGLLLVPYLNSYQKNK 120 G+IA AGG +F RIDDAFAVV+ G P V VQ +NR VG T++ G +LVP LNSY+ N Sbjct: 625 GAIAVAGGDIFTSTRIDDAFAVVDVGTPGVEVQQQNRRVGKTNNSGRILVPNLNSYEPNT 684 Query: 121 ISIDPKNLPVDADVPSTREVVVPADRSGVVVNFGISETPKAALVTFTDSKGKPLAVGAQG 180 +SIDPKNLP+DADVP+T+EVVVPA RSGVVV FG+SETPKAAL+T TD G PL G G Sbjct: 685 VSIDPKNLPIDADVPATKEVVVPAARSGVVVKFGVSETPKAALITITDKNGVPLQAGLNG 744 Query: 181 HLESGKQTFVIGYDGQGYISGLTDQNVATIDLPDGSSCRAAFGYAPKPGEQVAIKDVIC 239 L + FV GYDGQ Y+ GL +N I L DGS+C A F Y P+PG+QV I DV C Sbjct: 745 KLRGTSEEFVTGYDGQVYLRGLGARNAIDISLQDGSTCHAEFPYKPQPGKQVVINDVRC 803