BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0005.p         (175 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_107982.1| spore coat protein U precursor [Mesorhizobium l...   196   8e-49
ref|YP_001373289.1| spore coat U domain-containing protein [Ochr...   177   4e-43
ref|YP_004552187.1| Spore coat protein U [Sinorhizobium meliloti...   171   3e-41
ref|YP_002540764.1| Spore Coat Protein U family protein [Agrobac...   157   6e-37
emb|CAQ18215.1| conserved hypothetical protein [Ralstonia solana...   155   2e-36

>ref|NP_107982.1| spore coat protein U precursor [Mesorhizobium loti MAFF303099]
 dbj|BAB54127.1| mll7726 [Mesorhizobium loti MAFF303099]
          Length = 165

 Score =  196 bits (499), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 99/144 (68%), Positives = 116/144 (80%)

Query: 32  ARAATATGQFNVTITIQSNCVVQSATDLAFGSQGVLSANVDAQSTISVQCTNTTPYTVGI 91
           A+ ATATG   V ITIQ+ C VQ+ATD+ FG+ GV+ ANVD  STISVQCTN+TPY VG+
Sbjct: 22  AQGATATGNMTVRITIQAECKVQTATDMDFGTNGVIDANVDQTSTISVQCTNSTPYNVGL 81

Query: 92  SAGNGAGATTAARKMTGTAAATVTYSVYRDAARSLVWGTTIGTDTLAGIGNGNPQPITVY 151
           SAG GAGAT A RKMTG AAA + YS+YRD AR+ +WGTTIGTDT+AG GNG  QP+TVY
Sbjct: 82  SAGVGAGATVAVRKMTGPAAAVLNYSLYRDVARAQLWGTTIGTDTVAGTGNGAAQPLTVY 141

Query: 152 GRVPPQATPAAGGYSDTLTVTVTY 175
           GRVPPQ TP AG Y+DT+ +TVTY
Sbjct: 142 GRVPPQTTPGAGVYTDTVAITVTY 165


>ref|YP_001373289.1| spore coat U domain-containing protein [Ochrobactrum anthropi ATCC
           49188]
 gb|ABS17460.1| Spore coat U domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 165

 Score =  177 bits (450), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/150 (66%), Positives = 116/150 (77%), Gaps = 2/150 (1%)

Query: 26  SLAPQLARAATATGQFNVTITIQSNCVVQSATDLAFGSQGVLSANVDAQSTISVQCTNTT 85
           +L P LA  ATATG  NV ITIQ+ C + +ATDL FG++GV+  NVD  STISVQCTN T
Sbjct: 18  TLDPGLA--ATATGNMNVRITIQAECKIVTATDLDFGTKGVIDVNVDQTSTISVQCTNGT 75

Query: 86  PYTVGISAGNGAGATTAARKMTGTAAATVTYSVYRDAARSLVWGTTIGTDTLAGIGNGNP 145
           PYTVG+SAG GAGAT A RKMTG A+AT+ Y++YRDAAR+ VWG T GTD ++G GNGN 
Sbjct: 76  PYTVGLSAGGGAGATVAMRKMTGAASATINYTIYRDAARTQVWGVTAGTDVVSGTGNGNA 135

Query: 146 QPITVYGRVPPQATPAAGGYSDTLTVTVTY 175
           Q IT YGRVP Q TPA G YSD ++VTVTY
Sbjct: 136 QSITAYGRVPAQTTPAPGVYSDVVSVTVTY 165


>ref|YP_004552187.1| Spore coat protein U [Sinorhizobium meliloti AK83]
 gb|AEG58263.1| Spore coat protein U [Sinorhizobium meliloti AK83]
          Length = 165

 Score =  171 bits (434), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/164 (60%), Positives = 122/164 (74%), Gaps = 5/164 (3%)

Query: 15  ALAGGLVIAVAS---LAPQLARAATATGQFNVTITIQSNCVVQSATDLAFGSQGVLSANV 71
           AL G  ++A A    L P  A  ATATG   V ITIQ+ C +Q++ DL FG++GV+ ANV
Sbjct: 4   ALRGTAIVAAAMMTLLGP--AMGATATGNMTVRITIQAECKIQTSGDLDFGTRGVIDANV 61

Query: 72  DAQSTISVQCTNTTPYTVGISAGNGAGATTAARKMTGTAAATVTYSVYRDAARSLVWGTT 131
           D  STI VQCT+   Y VG+SAG GAGATT+ RKMTG AAAT+ Y++YRD AR+ +WG T
Sbjct: 62  DQTSTIGVQCTSGQTYNVGLSAGAGAGATTSIRKMTGPAAATINYALYRDTARTQLWGVT 121

Query: 132 IGTDTLAGIGNGNPQPITVYGRVPPQATPAAGGYSDTLTVTVTY 175
           IGTDT+AG GNG+ Q +TVYGRVPPQ TPAAG Y+DT+ +TVTY
Sbjct: 122 IGTDTVAGTGNGDVQNLTVYGRVPPQVTPAAGVYTDTVAITVTY 165


>ref|YP_002540764.1| Spore Coat Protein U family protein [Agrobacterium radiobacter K84]
 gb|ACM29169.1| Spore Coat Protein U family protein [Agrobacterium radiobacter K84]
          Length = 165

 Score =  157 bits (396), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/162 (58%), Positives = 113/162 (69%), Gaps = 1/162 (0%)

Query: 15  ALAGGLVIAVASLAPQL-ARAATATGQFNVTITIQSNCVVQSATDLAFGSQGVLSANVDA 73
           AL G L++  A    +    AATA+G   V I IQ+ C VQSA DL FG++GVL A  D 
Sbjct: 4   ALRGALLVGAAIFITEAPVMAATASGNMTVRIVIQAECKVQSAGDLDFGTKGVLDATNDQ 63

Query: 74  QSTISVQCTNTTPYTVGISAGNGAGATTAARKMTGTAAATVTYSVYRDAARSLVWGTTIG 133
            S+I VQCT    Y VG+SAG GA ATTA R+MTG  AATV YS+YRD+  +L+WG T+G
Sbjct: 64  TSSIGVQCTTGQTYNVGLSAGAGASATTAVRQMTGPGAATVNYSIYRDSGHTLLWGVTVG 123

Query: 134 TDTLAGIGNGNPQPITVYGRVPPQATPAAGGYSDTLTVTVTY 175
           TDT+AG GNGN Q I VYGRVP Q TPAAG Y+DT+ +TVTY
Sbjct: 124 TDTVAGTGNGNVQNIPVYGRVPAQTTPAAGTYTDTVAITVTY 165


>emb|CAQ18215.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 173

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/156 (51%), Positives = 111/156 (71%), Gaps = 1/156 (0%)

Query: 20  LVIAVASLAPQLARAATATGQFNVTITIQSNCVVQSATDLAFGSQGVLSANVDAQSTISV 79
           LV+ VA + P    AAT T  F V++T+Q++C + +A  L FG+QGVL+ANVD  +T+SV
Sbjct: 19  LVLMVALVFPGWLSAATKTTTFTVSLTLQADCSI-AANTLNFGTQGVLAANVDQTTTVSV 77

Query: 80  QCTNTTPYTVGISAGNGAGATTAARKMTGTAAATVTYSVYRDAARSLVWGTTIGTDTLAG 139
            C+NT  Y VG  AG   G+T AAR + G+ AATV + +Y D+AR+ +WG T+GTDT++G
Sbjct: 78  TCSNTAAYNVGFDAGTTTGSTVAARLLAGSGAATVGFQLYSDSARTQIWGNTVGTDTVSG 137

Query: 140 IGNGNPQPITVYGRVPPQATPAAGGYSDTLTVTVTY 175
            G+G  Q +TVYGRVP Q +PAAG YS T+T T+T+
Sbjct: 138 TGSGTAQVLTVYGRVPSQTSPAAGAYSTTITATITF 173