BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0002.p (386 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774925.1| conjugal transfer ATPase TrbE [Bradyrhizobium j... 582 e-164 ref|ZP_08868532.1| Conjugal transfer protein trbE [Azospirillum ... 541 e-152 ref|YP_002277174.1| conjugal transfer ATPase TrbE [Gluconacetoba... 535 e-150 ref|ZP_07026209.1| AAA ATPase [Afipia sp. 1NLS2] >gi|298593151|g... 535 e-150 ref|YP_001417888.1| conjugal transfer ATPase TrbE [Xanthobacter ... 493 e-137 >ref|NP_774925.1| conjugal transfer ATPase TrbE [Bradyrhizobium japonicum USDA 110] dbj|BAC53550.1| trbE [Bradyrhizobium japonicum USDA 110] Length = 812 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 291/293 (99%), Positives = 292/293 (99%) Query: 1 MIPLSAVWAGPDRDEHFRSSPLFFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA 60 +IPLSAVWAG DRDEHFRSSPLFFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA Sbjct: 400 LIPLSAVWAGSDRDEHFRSSPLFFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA 459 Query: 61 LMAIQFRRYRKSQIFAFDFGGSIRTAALAMGGDWHDLGGSLSNSAEDSVSLQPLARIGDA 120 LMAIQFRRYRKSQIFAFDFGGSIRTAALAMGGDWHDLGGSLSNSAEDSVSLQPLARIGDA Sbjct: 460 LMAIQFRRYRKSQIFAFDFGGSIRTAALAMGGDWHDLGGSLSNSAEDSVSLQPLARIGDA 519 Query: 121 AERAWAAEWVTAILAKEGVTIDPTVKEHVWSALTSLASSPAEERTITGLTVLLQSTALKQ 180 AERAWAAEWVTAILAKEGVTIDPTVKEHVWSALTSLASSPAEERTITGLTVLLQSTALKQ Sbjct: 520 AERAWAAEWVTAILAKEGVTIDPTVKEHVWSALTSLASSPAEERTITGLTVLLQSTALKQ 579 Query: 181 ALQPYCVGGSSGRLLDAEAEQLGFASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 240 ALQPYCVGGSSGRLLDAEAEQLGFASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP Sbjct: 580 ALQPYCVGGSSGRLLDAEAEQLGFASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 639 Query: 241 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 293 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA Sbjct: 640 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 692 >ref|ZP_08868532.1| Conjugal transfer protein trbE [Azospirillum amazonense Y2] gb|EGY01874.1| Conjugal transfer protein trbE [Azospirillum amazonense Y2] Length = 812 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 270/293 (92%), Positives = 277/293 (94%) Query: 1 MIPLSAVWAGPDRDEHFRSSPLFFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA 60 MIPLSAVWAGP RDEHF++ PL FGKTEGSTPFR SLHVGDVGHTLIVGPTGAGKSVLLA Sbjct: 400 MIPLSAVWAGPARDEHFQAPPLLFGKTEGSTPFRLSLHVGDVGHTLIVGPTGAGKSVLLA 459 Query: 61 LMAIQFRRYRKSQIFAFDFGGSIRTAALAMGGDWHDLGGSLSNSAEDSVSLQPLARIGDA 120 LMA+QFRRYR +QIFAFDFGGSIRTAALAMGGDWHDLGGSLS +E SVSLQPLARI D Sbjct: 460 LMAMQFRRYRNNQIFAFDFGGSIRTAALAMGGDWHDLGGSLSAGSEHSVSLQPLARIDDQ 519 Query: 121 AERAWAAEWVTAILAKEGVTIDPTVKEHVWSALTSLASSPAEERTITGLTVLLQSTALKQ 180 AERAWAAEWVTAILAKEGVTIDPT KEHVWSALTSLASSP ERTITGL VLLQSTALKQ Sbjct: 520 AERAWAAEWVTAILAKEGVTIDPTAKEHVWSALTSLASSPVGERTITGLAVLLQSTALKQ 579 Query: 181 ALQPYCVGGSSGRLLDAEAEQLGFASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 240 ALQPYCVGG SGRLLDAE+EQLG A+VQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP Sbjct: 580 ALQPYCVGGPSGRLLDAESEQLGTATVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 639 Query: 241 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 293 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA Sbjct: 640 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 692 >ref|YP_002277174.1| conjugal transfer ATPase TrbE [Gluconacetobacter diazotrophicus PAl 5] gb|ACI52559.1| AAA ATPase [Gluconacetobacter diazotrophicus PAl 5] Length = 812 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 268/293 (91%), Positives = 274/293 (93%) Query: 1 MIPLSAVWAGPDRDEHFRSSPLFFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA 60 MIPLSAVWAGP RDEHF++ PL FGKTEGSTPFR SLHVGDVGHTLIVGPTGAGKSVLL+ Sbjct: 400 MIPLSAVWAGPARDEHFQAPPLLFGKTEGSTPFRLSLHVGDVGHTLIVGPTGAGKSVLLS 459 Query: 61 LMAIQFRRYRKSQIFAFDFGGSIRTAALAMGGDWHDLGGSLSNSAEDSVSLQPLARIGDA 120 LMA+QFRRYR +QIFAFDFGGSIRTAALAMGGDWHDLGGSLS +E SVSLQPLARI Sbjct: 460 LMAMQFRRYRNNQIFAFDFGGSIRTAALAMGGDWHDLGGSLSAGSEHSVSLQPLARIDAQ 519 Query: 121 AERAWAAEWVTAILAKEGVTIDPTVKEHVWSALTSLASSPAEERTITGLTVLLQSTALKQ 180 AERAWAAEWV AILAKEGVTIDPT KEHVWSALTSLASSP ERTITGL VLLQSTALKQ Sbjct: 520 AERAWAAEWVAAILAKEGVTIDPTAKEHVWSALTSLASSPVGERTITGLAVLLQSTALKQ 579 Query: 181 ALQPYCVGGSSGRLLDAEAEQLGFASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 240 ALQPYCVGG SGRLLDAE EQLG ASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP Sbjct: 580 ALQPYCVGGPSGRLLDAEVEQLGSASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 639 Query: 241 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 293 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA Sbjct: 640 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 692 >ref|ZP_07026209.1| AAA ATPase [Afipia sp. 1NLS2] gb|EFI53351.1| AAA ATPase [Afipia sp. 1NLS2] Length = 812 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 266/293 (90%), Positives = 274/293 (93%) Query: 1 MIPLSAVWAGPDRDEHFRSSPLFFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA 60 MIPLSAVWAGP RDEHF++ PL +GKTEGSTPFR SLHVGDVGH LIVGPTGAGKSVLLA Sbjct: 400 MIPLSAVWAGPARDEHFQAPPLLYGKTEGSTPFRLSLHVGDVGHMLIVGPTGAGKSVLLA 459 Query: 61 LMAIQFRRYRKSQIFAFDFGGSIRTAALAMGGDWHDLGGSLSNSAEDSVSLQPLARIGDA 120 LMA+QFRRYR +QIFAFDFGGSIRTAA+AMGGDWHDLGGSLS +E SVSLQPLARI D Sbjct: 460 LMAMQFRRYRNNQIFAFDFGGSIRTAAIAMGGDWHDLGGSLSAGSEHSVSLQPLARIDDQ 519 Query: 121 AERAWAAEWVTAILAKEGVTIDPTVKEHVWSALTSLASSPAEERTITGLTVLLQSTALKQ 180 ERAWAAEWVTAILAKEGVTIDPT KEHVWSALTSLASSP +ERTITGL VLLQSTALKQ Sbjct: 520 PERAWAAEWVTAILAKEGVTIDPTAKEHVWSALTSLASSPVQERTITGLAVLLQSTALKQ 579 Query: 181 ALQPYCVGGSSGRLLDAEAEQLGFASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 240 ALQPYCVGG SGRLLDAE EQLG A VQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP Sbjct: 580 ALQPYCVGGPSGRLLDAETEQLGSAPVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 639 Query: 241 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 293 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA Sbjct: 640 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 692 >ref|YP_001417888.1| conjugal transfer ATPase TrbE [Xanthobacter autotrophicus Py2] gb|ABS68231.1| AAA ATPase [Xanthobacter autotrophicus Py2] Length = 812 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 241/293 (82%), Positives = 259/293 (88%) Query: 1 MIPLSAVWAGPDRDEHFRSSPLFFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA 60 MIPLSAVWAGP+RDEHF + PL FGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA Sbjct: 400 MIPLSAVWAGPERDEHFAAPPLLFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLA 459 Query: 61 LMAIQFRRYRKSQIFAFDFGGSIRTAALAMGGDWHDLGGSLSNSAEDSVSLQPLARIGDA 120 LMA+QFRRYR++Q+FAFDFGGSIR AALAMGGDWHDLGG LS+ AE SVSLQPLA I D Sbjct: 460 LMALQFRRYRQAQVFAFDFGGSIRAAALAMGGDWHDLGGDLSDGAEASVSLQPLAGINDV 519 Query: 121 AERAWAAEWVTAILAKEGVTIDPTVKEHVWSALTSLASSPAEERTITGLTVLLQSTALKQ 180 ERAWAA+W+ AIL +EGV I P VKEH+W+ALTSLAS+P EERTITGL VLLQS LKQ Sbjct: 520 PERAWAADWIVAILTREGVAITPEVKEHIWTALTSLASAPVEERTITGLCVLLQSNDLKQ 579 Query: 181 ALQPYCVGGSSGRLLDAEAEQLGFASVQAFETEGLIGAGAAPAVLTYLFHRIEGRLDGRP 240 AL+ YC+GG GRLLDAE E LG A+VQAFETEGLIG GAAPAVL+YLFHRIE RLDG P Sbjct: 580 ALRAYCIGGPYGRLLDAEREHLGTATVQAFETEGLIGTGAAPAVLSYLFHRIEDRLDGSP 639 Query: 241 TLLIIDEGWLVLDDPAFAQQLREWLKTLRKKNASVVFATQSLSDIDGSNIAPA 293 TLLIIDEGWL LDD FA QLREWLKTLRKKNASV+FATQSLSDIDGS IAPA Sbjct: 640 TLLIIDEGWLALDDEGFASQLREWLKTLRKKNASVIFATQSLSDIDGSAIAPA 692