BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0036.p (382 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772176.1| major facilitator superfamily transporter [Brad... 509 e-142 ref|YP_001205017.1| putative inner membrane transport protein [B... 468 e-130 ref|YP_781259.1| major facilitator transporter [Rhodopseudomonas... 450 e-124 ref|YP_001241100.1| putative inner membrane transport protein [B... 441 e-122 ref|YP_001992858.1| major facilitator superfamily protein [Rhodo... 432 e-119 >ref|NP_772176.1| major facilitator superfamily transporter [Bradyrhizobium japonicum USDA 110] dbj|BAC50801.1| major facilitator superfamily transporter [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 276/380 (72%), Positives = 314/380 (82%), Gaps = 5/380 (1%) Query: 3 RFAPTALMLGNIVTGCSVLAPAGMLAELSDGLGVTIHTAGLLITFGAIVLCVGSPVTAWL 62 RFAPTA MLGN+VTGCSVLAPAGML ELS GLG++IH AGLLITFGAI LC+GSP+TAWL Sbjct: 9 RFAPTAFMLGNLVTGCSVLAPAGMLPELSAGLGISIHAAGLLITFGAITLCIGSPLTAWL 68 Query: 63 TS-----XLLTATLLVLTLTNAASAFAPNYDSLLIIRLVMLAVGVLYTPQAAGTAALIVP 117 TS LL TL VL N ASAFAP+Y SLL+IRLVMLAVG LYTPQAAGTAALIVP Sbjct: 69 TSRIERRTLLATTLAVLAFGNLASAFAPDYASLLVIRLVMLAVGALYTPQAAGTAALIVP 128 Query: 118 VEKRGSTIAYIFLGWSLAAAIGLSLITFIASRYGFRVTYGAIALTGLVSSLLLWWRLPGG 177 E+RGSTIAYIFLGWSLAAA+GL LITF+ASRYG+R YG I G +S LLL RLP G Sbjct: 129 AERRGSTIAYIFLGWSLAAAVGLPLITFMASRYGWRAAYGGIGALGCISFLLLLLRLPAG 188 Query: 178 LHGAPVDLRTWVDLGRNPMVILLLSITTLQMSGQFVVFTFMGPLLAKLTGANADAVGIVF 237 L G PVDL+TW +GR+ V+LLL+IT LQMSGQFVVFTFMGPLL KLTGA DA+G+VF Sbjct: 189 LKGTPVDLKTWSAVGRDRTVLLLLAITMLQMSGQFVVFTFMGPLLKKLTGAGPDAIGMVF 248 Query: 238 ALYGIFGFVGIVIATRVVDSWGAWKTSVLFTVLLLAGVAGWALSAGAYALMAASVAVWGL 297 +YG+ GF+G+VIATR+VD+WG ++TS+LFT LLLAG+AGWAL AG + LMA + A+WGL Sbjct: 249 GIYGLCGFLGVVIATRIVDTWGPYRTSLLFTCLLLAGIAGWALGAGTFVLMAGAAAIWGL 308 Query: 298 GFASTNSMQQVRLVGAAPALASASVSLNTSVLYIGQAIGSAIGGLLFAHEWLHSAGYVAT 357 GFASTNSMQQVRLV AP LASA+V+LNTSVLYIGQA+GSAIGGLLFAHE LH G+VA Sbjct: 309 GFASTNSMQQVRLVATAPPLASATVALNTSVLYIGQAVGSAIGGLLFAHELLHPLGFVAV 368 Query: 358 VFVAAALAVVIITRPRRTAA 377 FV AL +VI+TRP AA Sbjct: 369 GFVVLALVLVILTRPGPAAA 388 >ref|YP_001205017.1| putative inner membrane transport protein [Bradyrhizobium sp. ORS 278] emb|CAL76780.1| putative inner membrane transport protein [Bradyrhizobium sp. ORS 278] Length = 396 Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust. Identities = 272/381 (71%), Positives = 308/381 (80%), Gaps = 5/381 (1%) Query: 2 KRFAPTALMLGNIVTGCSVLAPAGMLAELSDGLGVTIHTAGLLITFGAIVLCVGSPVTAW 61 RFAPTALMLGNI+TGCSVLAPAG+L EL++GL V +HTAGLLITFGA+VLC+ SP+TAW Sbjct: 13 PRFAPTALMLGNIITGCSVLAPAGLLPELAEGLSVEVHTAGLLITFGAVVLCICSPLTAW 72 Query: 62 LTSXL-----LTATLLVLTLTNAASAFAPNYDSLLIIRLVMLAVGVLYTPQAAGTAALIV 116 LT L TLLVL L N ASAFAP+Y SLL+IRLVMLAVG LYTPQAAGTAALI Sbjct: 73 LTGRFDRRLLLAFTLLVLALGNLASAFAPSYASLLVIRLVMLAVGALYTPQAAGTAALIS 132 Query: 117 PVEKRGSTIAYIFLGWSLAAAIGLSLITFIASRYGFRVTYGAIALTGLVSSLLLWWRLPG 176 PVEKRGSTIAY+FLGWSLAAA+GL LITFI S G+R Y + G VS LLL WRLP Sbjct: 133 PVEKRGSTIAYVFLGWSLAAAVGLPLITFIGSHSGWRAAYLTVGAAGAVSLLLLTWRLPS 192 Query: 177 GLHGAPVDLRTWVDLGRNPMVILLLSITTLQMSGQFVVFTFMGPLLAKLTGANADAVGIV 236 GL GAPV+L+TW +LGRN +V+LLL ITTLQMSGQFV+FTFMGPLL LTGA +AVG+V Sbjct: 193 GLKGAPVELKTWSELGRNRLVVLLLLITTLQMSGQFVIFTFMGPLLKTLTGAEPNAVGLV 252 Query: 237 FALYGIFGFVGIVIATRVVDSWGAWKTSVLFTVLLLAGVAGWALSAGAYALMAASVAVWG 296 FA+YGI GFVG+VIATR+VD WG ++TS+LFT LL AG+A W SAG YA MA +VA+WG Sbjct: 253 FAIYGICGFVGVVIATRIVDGWGPYRTSLLFTCLLFAGIALWTASAGVYAAMALAVAIWG 312 Query: 297 LGFASTNSMQQVRLVGAAPALASASVSLNTSVLYIGQAIGSAIGGLLFAHEWLHSAGYVA 356 LGFASTNSMQQVRLV AAP LASASVSLNTSVLYIGQAIGSA+GG LFA L + GYVA Sbjct: 313 LGFASTNSMQQVRLVAAAPPLASASVSLNTSVLYIGQAIGSAVGGSLFARGALGATGYVA 372 Query: 357 TVFVAAALAVVIITRPRRTAA 377 FV AL ++ +RPR A Sbjct: 373 MAFVMLALLAILASRPRSPVA 393 >ref|YP_781259.1| major facilitator transporter [Rhodopseudomonas palustris BisA53] gb|ABJ06279.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris BisA53] Length = 374 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 245/366 (66%), Positives = 291/366 (79%), Gaps = 5/366 (1%) Query: 10 MLGNIVTGCSVLAPAGMLAELSDGLGVTIHTAGLLITFGAIVLCVGSPVTAWLTSXL--- 66 MLGN VTG +VLAPAGML EL+ V+I GLLITFGA+VLC+GSP+TAWLTS + Sbjct: 1 MLGNFVTGTAVLAPAGMLPELAAAFSVSIPEIGLLITFGAVVLCIGSPLTAWLTSRIERR 60 Query: 67 --LTATLLVLTLTNAASAFAPNYDSLLIIRLVMLAVGVLYTPQAAGTAALIVPVEKRGST 124 L ATL VL LTN ASAFAP+Y LLIIRLVMLA+G LYTPQ+AG A +IVP EKRG T Sbjct: 61 TLLAATLAVLALTNLASAFAPSYAMLLIIRLVMLAIGSLYTPQSAGAAGMIVPAEKRGGT 120 Query: 125 IAYIFLGWSLAAAIGLSLITFIASRYGFRVTYGAIALTGLVSSLLLWWRLPGGLHGAPVD 184 +AY+FLGWSLA A+GL L+TFIASRYG+R Y + L G++S LLL WRLPGGL G PV+ Sbjct: 121 MAYVFLGWSLAVAVGLPLVTFIASRYGWRAAYAGVGLFGVLSFLLLAWRLPGGLSGVPVN 180 Query: 185 LRTWVDLGRNPMVILLLSITTLQMSGQFVVFTFMGPLLAKLTGANADAVGIVFALYGIFG 244 L+TWV +GRNP+++ LL +TTLQ SGQF VFTF GPLLAKLTGA DA+G+ FA+YG+ G Sbjct: 181 LKTWVAVGRNPLILALLLVTTLQTSGQFAVFTFFGPLLAKLTGAGPDAIGLTFAIYGVCG 240 Query: 245 FVGIVIATRVVDSWGAWKTSVLFTVLLLAGVAGWALSAGAYALMAASVAVWGLGFASTNS 304 F G VI++R+VD WGA++TSVL +LL G + WAL AG++A+MAA VA+WGLGFASTNS Sbjct: 241 FAGNVISSRIVDFWGAYRTSVLAIAVLLTGASIWALGAGSFAVMAAGVAIWGLGFASTNS 300 Query: 305 MQQVRLVGAAPALASASVSLNTSVLYIGQAIGSAIGGLLFAHEWLHSAGYVATVFVAAAL 364 MQQVRLV AAP LASA+VSLNTSVLYIGQA+GS IGG LFA +L GYVA F+A AL Sbjct: 301 MQQVRLVTAAPPLASATVSLNTSVLYIGQAVGSGIGGALFAAGFLREMGYVAMGFIALAL 360 Query: 365 AVVIIT 370 I+T Sbjct: 361 VTAILT 366 >ref|YP_001241100.1| putative inner membrane transport protein [Bradyrhizobium sp. BTAi1] gb|ABQ37194.1| putative inner membrane transport protein [Bradyrhizobium sp. BTAi1] Length = 391 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 268/377 (71%), Positives = 307/377 (81%), Gaps = 5/377 (1%) Query: 2 KRFAPTALMLGNIVTGCSVLAPAGMLAELSDGLGVTIHTAGLLITFGAIVLCVGSPVTAW 61 RFAPTALMLGNIVTGCSVLAPAGML EL+ GLG+ IHTAGLLITFGA+VLC+ SP+TAW Sbjct: 8 PRFAPTALMLGNIVTGCSVLAPAGMLPELAAGLGIGIHTAGLLITFGAVVLCICSPLTAW 67 Query: 62 LTSXL-----LTATLLVLTLTNAASAFAPNYDSLLIIRLVMLAVGVLYTPQAAGTAALIV 116 LTS L ATLLVLTL N SAF P+Y LL +RL+MLAVG LYTPQAAGTAALI Sbjct: 68 LTSRFDRRLLLAATLLVLTLGNLGSAFVPDYAGLLALRLLMLAVGALYTPQAAGTAALIS 127 Query: 117 PVEKRGSTIAYIFLGWSLAAAIGLSLITFIASRYGFRVTYGAIALTGLVSSLLLWWRLPG 176 PVE RGSTIAY+FLGWSLAAA+GL LITFI S G+R Y A+ G +S LLL WRLP Sbjct: 128 PVETRGSTIAYVFLGWSLAAAVGLPLITFIGSHSGWRAAYLAVGAAGAISLLLLTWRLPS 187 Query: 177 GLHGAPVDLRTWVDLGRNPMVILLLSITTLQMSGQFVVFTFMGPLLAKLTGANADAVGIV 236 GL GAPV L+TW +L RN MV+LLL ITTLQMSGQFV+FTFMGPLL +LTGA+A+ VG+V Sbjct: 188 GLKGAPVALKTWTELARNRMVVLLLLITTLQMSGQFVIFTFMGPLLNRLTGADANQVGLV 247 Query: 237 FALYGIFGFVGIVIATRVVDSWGAWKTSVLFTVLLLAGVAGWALSAGAYALMAASVAVWG 296 FA+YG GF+G+VIATR+VD WGA++TS+LF+ LL AG+A W L AG+Y+LMA +VA+WG Sbjct: 248 FAIYGACGFLGVVIATRIVDGWGAYRTSLLFSCLLFAGIAVWTLGAGSYSLMAVAVAIWG 307 Query: 297 LGFASTNSMQQVRLVGAAPALASASVSLNTSVLYIGQAIGSAIGGLLFAHEWLHSAGYVA 356 LGFASTNSMQQVRLV AAP LASASVSLNTSVLYIGQAIGSA+GG LFA WL + GY A Sbjct: 308 LGFASTNSMQQVRLVAAAPPLASASVSLNTSVLYIGQAIGSALGGSLFARGWLDATGYAA 367 Query: 357 TVFVAAALAVVIITRPR 373 F AL ++ +RPR Sbjct: 368 MGFAMLALLAILASRPR 384 >ref|YP_001992858.1| major facilitator superfamily protein [Rhodopseudomonas palustris TIE-1] gb|ACF02383.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris TIE-1] Length = 382 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 244/380 (64%), Positives = 292/380 (76%), Gaps = 5/380 (1%) Query: 2 KRFAPTALMLGNIVTGCSVLAPAGMLAELSDGLGVTIHTAGLLITFGAIVLCVGSPVTAW 61 + FAPTALMLGN VTG SVLAPAGML +L+ GLGVTI AGLLITFGAIVLC+GSP+TAW Sbjct: 3 RSFAPTALMLGNFVTGTSVLAPAGMLPDLAAGLGVTIRDAGLLITFGAIVLCIGSPLTAW 62 Query: 62 LTSXL-----LTATLLVLTLTNAASAFAPNYDSLLIIRLVMLAVGVLYTPQAAGTAALIV 116 LTS + LT TL VL L N ASAFAPNY LL++RL ML+VG LYTPQAAG ALIV Sbjct: 63 LTSRIDRRLLLTTTLAVLALGNLASAFAPNYAVLLVLRLAMLSVGALYTPQAAGAVALIV 122 Query: 117 PVEKRGSTIAYIFLGWSLAAAIGLSLITFIASRYGFRVTYGAIALTGLVSSLLLWWRLPG 176 P E RG T+AY+FLGWSLA A+G+ L+TF A G+R Y + GL+S +LLW RLPG Sbjct: 123 PPESRGGTMAYVFLGWSLAVALGVPLVTFAADHAGWRGAYLTVGSIGLISFILLWLRLPG 182 Query: 177 GLHGAPVDLRTWVDLGRNPMVILLLSITTLQMSGQFVVFTFMGPLLAKLTGANADAVGIV 236 GL APV LRTW +GRN ++ LL +++LQ SGQFVVFTF GPLL LTGA + +V Sbjct: 183 GLTAAPVSLRTWAAVGRNRRILTLLGVSSLQTSGQFVVFTFFGPLLTGLTGAGPREIALV 242 Query: 237 FALYGIFGFVGIVIATRVVDSWGAWKTSVLFTVLLLAGVAGWALSAGAYALMAASVAVWG 296 FA+YG+ GFVG VIA+R+VD WGA++TS LFT L+LAG+AGW +AG +A+MAA+VAVWG Sbjct: 243 FAIYGVCGFVGNVIASRIVDGWGAYRTSALFTALMLAGIAGWTFAAGHFAVMAAAVAVWG 302 Query: 297 LGFASTNSMQQVRLVGAAPALASASVSLNTSVLYIGQAIGSAIGGLLFAHEWLHSAGYVA 356 LGFA++NSMQQVRLV A P LA A+VSLNTSVLY+GQAIGSA+GG LFA LH GYV+ Sbjct: 303 LGFAASNSMQQVRLVTADPMLAGATVSLNTSVLYVGQAIGSALGGTLFAAGLLHVNGYVS 362 Query: 357 TVFVAAALAVVIITRPRRTA 376 T + AL +V++ R A Sbjct: 363 TAVLTLALCMVVVATRDRNA 382